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Detail for ZS11_A01G00020.t1

Genome:
ZS11: ZS11_A01G00020.t1
ZS11_v0: BnaC01T0001700ZS
WE: WE_scaffold0003G03090.t1
WE_v0: Bnascaffold1716T0018100WE
Darmor: C01p00120.1_BnaDAR
BH: BnaC03T694200BH
Quinta: BnaA08T0192600QU.1
ZS2: BnaC01T001600ZS2
SW: BnaC03T682400SW
Express61: A01p000110.1_BnaEXP
Xiaoyun: BnaA01G0001200XY
P202: BnaC01G000170P202.1
BL: BnaC03T694200BH
TA: BnaC01T001500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g00260D
RB: BnaC03T697300RB
No2127: BnaC03T0582100NO
P130: BnaC01G000700P130.1
Length: 346
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013737099.1
NR E-value: 6.400000e-103
NR Score: 379.4
NR Annotation: XP_013737099.1 proline-rich protein 4-like [Brassica napus]
SwissProt Protein: Q9T0I5|PRP4_ARATH
SwissProt E-value: 6.290000e-86
SwissProt Score: 269.0
SwissProt Annotation: Proline-rich protein 4 OS=Arabidopsis thaliana OX=3702 GN=PRP4 PE=2 SV=1
CDS Sequence (1055 bp)
ATGAGGATCTTACCAGAGCCTCGAGGTTCGGTTCCATGCCTCATTCTCCTCGTGTCGTCGGTTCTATTTT
CAGCGACTCTATCCCTCGCTCGTGTCGTCGAAGTTGTTGGTTACGCCGAGAGCAAAATCAAAAATCCCCG
TGCATTCTCAGGACTCCGAGTGACGATTGAATGTAAGGGGGAGAAAGGGCATTTTGTTACAAAAGGTTCT
GGAAACATTGATGAGGAAGGAAAGTTCGGTCTGAAAGTTCTTCCTCATGACATTATCTCTGACGACGGAG
CTTTAAAGGAGGAGTGCTATGCTCAGCTTCACAGTGCGGAGGGAGCACCTTGTCCGGCTCACGACGGCCT
TGAGTCAAACAAGATCGTGTTTCTATACACATCCGGAGACAAACACATTTTGGGCCTCAAACAAAACCTG
AGGTTTACACCTGAACTTTGTGTTTCCAAATTCTTTTGGCCTATGCCTAAGTTCCCTCCTTTTAAGGGAT
TTGAACATCATTTCCCTTTACCTCCACTGTTTCCTAAATTCAAGAAACCTTGCCCACCTCCCCTTGAGGA
AGTTCCACCACCACCAACGGTAGAGATTCCGCCACCTGTCCCGGTTCACGATCCATCCCCAAAGGTGGAG
CTTCCACCACCGGCTCCTAAGAAGTCTTGTCCTCCTAAATCGCCGAAGATAGAGCACCCACCTCCTGTTC
CCGTTTACAAGCCGCCACCAAAGATAGAGCATTCACCTCCTAAGAAGCCATGCCCACCGCCGGTTCACGT
ATACAAGCCGCCACCGAAGAAAGTTGATCCACCGCCGGTTCCAGTTCACAAGATACCACCAAAGAAGGCA
TGCCCCCCAAAGATCGAGCTCCCACCACCAGTCCCGATCTACAAGCCGCCGGCGAAGATAGAGCATCCAC
CAATCTACGTGCCACCGGTGGTGATTCCGAAGAAGCCATGTCCACCACTTTCAAAGTTTCCACCTCTTCC
TCCTAAATACATTCACCATCCCAAGTTCGGCAAATGGCCTCCCTTGCCAACACACCCTTGA
Upstream Sequence
ATGAGGATCTTACCAGAGCCTCGAGGTTCGGTTCCATGCCTCATTCTCCTCGTGTCGTCGGTTCTATTTT
CAGCGACTCTATCCCTCGCTCGTGTCGTCGAAGTTGTTGGTTACGCCGAGAGCAAAATCAAAAATCCCCG
TGCATTCTCAGGACTCCGAGTGACGATTGAATGTAAGGGGGAGAAAGGGCATTTTGTTACAAAAGGTTCT
GGAAACATTGATGAGGAAGGAAAGTTCGGTCTGAAAGTTCTTCCTCATGACATTATCTCTGACGACGGAG
CTTTAAAGGAGGAGTGCTATGCTCAGCTTCACAGTGCGGAGGGAGCACCTTGTCCGGCTCACGACGGCCT
TGAGTCAAACAAGATCGTGTTTCTATACACATCCGGAGACAAACACATTTTGGGCCTCAAACAAAACCTG
AGGTTTACACCTGAACTTTGTGTTTCCAAATTCTTTTGGCCTATGCCTAAGTTCCCTCCTTTTAAGGGAT
TTGAACATCATTTCCCTTTACCTCCACTGTTTCCTAAATTCAAGAAACCTTGCCCACCTCCCCTTGAGGA
AGTTCCACCACCACCAACGGTAGAGATTCCGCCACCTGTCCCGGTTCACGATCCATCCCCAAAGGTGGAG
CTTCCACCACCGGCTCCTAAGAAGTCTTGTCCTCCTAAATCGCCGAAGATAGAGCACCCACCTCCTGTTC
CCGTTTACAAGCCGCCACCAAAGATAGAGCATTCACCTCCTAAGAAGCCATGCCCACCGCCGGTTCACGT
ATACAAGCCGCCACCGAAGAAAGTTGATCCACCGCCGGTTCCAGTTCACAAGATACCACCAAAGAAGGCA
TGCCCCCCAAAGATCGAGCTCCCACCACCAGTCCCGATCTACAAGCCGCCGGCGAAGATAGAGCATCCAC
CAATCTACGTGCCACCGGTGGTGATTCCGAAGAAGCCATGTCCACCACTTTCAAAGTTTCCACCTCTTCC
TCCTAAATACATTCACCATCCCAAGTTCGGCAAATGGCCTCCCTTGCCAACACACCCTTGA
Downstream Sequence
GGTAACCAACCACCAGGATTAATAATATCTTTTTTGTTATATAGTATGTAGTGTGGTTAT
TTAAAAGATGTGTGGGTATTACTACTTTTATGATTTTATCAAGGACTCCGAGTGACGATT
GAATGTAAGGGGGAGAAAGGGCATTTTGTTACAAAAGGTTCTGGAAACATTGATGAGGAA
GGAAAGTTCGGTCTGAAAGTTCTTCCTCATGACATTATCTCTGACGACGGAGCTTTAAAG
GAGGAGTGCTATGCTCAGCTTCACAGTGCGGAGGGAGCACCTTGTCCGGCTCACGACGGC
CTTGAGTCAAACAAGATCGTGTTTCTATACACATCCGGAGACAAACACATTTTGGGCCTC
AAACAAAACCTGAGGTTTACACCTGAACTTTGTGTTTCCAAATTCTTTTGGCCTATGCCT
AAGTTCCCTCCTTTTAAGGGATTTGAACATCATTTCCCTTTACCTCCACTGTTTCCTAAA
TTCAAGAAACCTTGCCCACCTCCCCTTGAGGAAGTTCCACCACCACCAACGGTAGAGATT
CCGCCACCTGTCCCGGTTCACGATCCATCCCCAAAGGTGGAGCTTCCACCACCGGCTCCT
AAGAAGTCTTGTCCTCCTAAATCGCCGAAGATAGAGCACCCACCTCCTGTTCCCGTTTAC
AAGCCGCCACCAAAGATAGAGCATTCACCTCCTAAGAAGCCATGCCCACCGCCGGTTCAC
GTATACAAGCCGCCACCGAAGAAAGTTGATCCACCGCCGGTTCCAGTTCACAAGATACCA
CCAAAGAAGGCATGCCCCCCAAAGATCGAGCTCCCACCACCAGTCCCGATCTACAAGCCG
CCGGCGAAGATAGAGCATCCACCAATCTACGTGCCACCGGTGGTGATTCCGAAGAAGCCA
TGTCCACCACTTTCAAAGTTTCCACCTCTTCCTCCTAAATACATTCACCATCCCAAGTTC
GGCAAATGGCCTCCCTTGCCAACACACCCTTGAAACTTTAAACGTTTACTCGTATTTTAA
AAAAAAATTATTGCATGCATGTTTAATATTTTGGTTGCTTTTGTCTCATTTAATCTTTGT
TTGCTTTATCTCCGATCGAGTTATATATATATGTAGACTGTTTGCGTAATTATTCCAGCA
ATAATATGGTAATGATTCCTTTCTCTTTTATTATGATGAGATTATCATCAGTGTAGAAAT
TTGACGACATATCTTATTTTTTCTTGAAGGTTGCAGTGACATAAACTGAGTGATATTTCA
AAAAGGGCAATTGTCAATAATAGCACATTTTGATTTTTTGTCTAAAAAATGACACTAGAA
GGAAAAAATCATAAAAATGACATTCATTAAAGGGTAAAatattcctaatatccttggttt
aaaattaaataaacaaacaaaaataagtaaaaacaaataaaataaaaataaaaaaatgaa
aaaaagaatttttttttatagtttcagattctatgttttcagattcaaaattttttataa
ttttttttaaatttttttttttttgaaattttttttttgaaatttttttttgaaattttc
tttttataattcaaaaatactttttgaaactgtttttaaattttaatttttagtatttat
tttttattttataaaattttaaactctaattccaaaaccccaccccttaactctaaaccc
TAAGATTTAGATTAATTAATCCAAGGGGTATAAGTGTATATTTACCTCTTTAATGAAACA
TATTTTTGTGACTTTGAGCCTTGAGTGCTAGTTTGGAAACAAAAACTTGATTTGGTGTTA
TCATAGTCTTTTTCTCTTTAAAAAATATGAAGTGACATTTTATTATTTGAATAAGTGTAA
TTAAACGGCCAATTATTTAAGGATTAGTGAAAAAAATATGAAAATATTGTTACAATAAAT
ATTTGTAGTCAACTAGAAGCAGACCCATTAGAGAGAAAAAAAAGGCGATCGATAATAAAA
AAAAATGGTGACGCGGACAA
Pro Sequence
MRILPEPRGSVPCLILLVSSVLFSATLSLARVVEVVGYAESKIKNPRAFS
GLRVTIECKGEKGHFVTKGSGNIDEEGKFGLKVLPHDIISDDGALKEECY
AQLHSAEGAPCPAHDGLESNKIVFLYTSGDKHILGLKQNLRFTPELCVSK
FFWPMPKFPPFKGFEHHFPLPPLFPKFKKPCPPPLEEVPPPPTVEIPPPV
PVHDPSPKVELPPPAPKKSCPPKSPKIEHPPPVPVYKPPPKIEHSPPKKP
CPPPVHVYKPPPKKVDPPPVPVHKIPPKKACPPKIELPPPVPIYKPPAKI
EHPPIYVPPVVIPKKPCPPLSKFPPLPPKYIHHPKFGKWPPLPTHP
mRNA Sequence
ATGAGGATCTTACCAGAGCCTCGAGGTTCGGTTCCATGCCTCATTCTCCTCGTGTCGTCGGTTCTATTTT
CAGCGACTCTATCCCTCGCTCGTGTCGTCGAAGTTGTTGGTTACGCCGAGAGCAAAATCAAAAATCCCCG
TGCATTCTCAGGACTCCGAGTGACGATTGAATGTAAGGGGGAGAAAGGGCATTTTGTTACAAAAGGTTCT
GGAAACATTGATGAGGAAGGAAAGTTCGGTCTGAAAGTTCTTCCTCATGACATTATCTCTGACGACGGAG
CTTTAAAGGAGGAGTGCTATGCTCAGCTTCACAGTGCGGAGGGAGCACCTTGTCCGGCTCACGACGGCCT
TGAGTCAAACAAGATCGTGTTTCTATACACATCCGGAGACAAACACATTTTGGGCCTCAAACAAAACCTG
AGGTTTACACCTGAACTTTGTGTTTCCAAATTCTTTTGGCCTATGCCTAAGTTCCCTCCTTTTAAGGGAT
TTGAACATCATTTCCCTTTACCTCCACTGTTTCCTAAATTCAAGAAACCTTGCCCACCTCCCCTTGAGGA
AGTTCCACCACCACCAACGGTAGAGATTCCGCCACCTGTCCCGGTTCACGATCCATCCCCAAAGGTGGAG
CTTCCACCACCGGCTCCTAAGAAGTCTTGTCCTCCTAAATCGCCGAAGATAGAGCACCCACCTCCTGTTC
CCGTTTACAAGCCGCCACCAAAGATAGAGCATTCACCTCCTAAGAAGCCATGCCCACCGCCGGTTCACGT
ATACAAGCCGCCACCGAAGAAAGTTGATCCACCGCCGGTTCCAGTTCACAAGATACCACCAAAGAAGGCA
TGCCCCCCAAAGATCGAGCTCCCACCACCAGTCCCGATCTACAAGCCGCCGGCGAAGATAGAGCATCCAC
CAATCTACGTGCCACCGGTGGTGATTCCGAAGAAGCCATGTCCACCACTTTCAAAGTTTCCACCTCTTCC
TCCTAAATACATTCACCATCCCAAGTTCGGCAAATGGCCTCCCTTGCCAACACACCCTTGA