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Detail for ZS11_A03G25050.t1

Genome:
ZS11: ZS11_A03G25050.t1
ZS11_v0: BnaA03T0225400ZS
WE: WE_A03G26110.t1
WE_v0: BnaA03T0237300WE
Darmor: A03p25700.1_BnaDAR
BH: BnaA03T236400BH
Quinta: BnaA03T0214500QU
ZS2: BnaA03T233800ZS2
SW: BnaA03T254000SW
Express61: A03p022360.1_BnaEXP
Xiaoyun: BnaC03G0262700XY
P202: BnaA03G019850P202.1
BL: BnaA03T236400BH
TA: BnaA03T216400TA
Da-Ae: Not available
RB: BnaA03T250000RB
No2127: BnaA03T0222800NO
P130: BnaA03G020750P130.1
Length: 139
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0006121(mitochondrial electron transport, succinate to ubiquinone)
Cellular Component: GO:0016020(membrane),GO:0005743(mitochondrial inner membrane),GO:0005749(mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: VDC80566.1
NR E-value: 1.100000e-66
NR Score: 257.7
NR Annotation: VDC80566.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q941A0|SDH4_ARATH
SwissProt E-value: 1.340000e-64
SwissProt Score: 196.0
SwissProt Annotation: Succinate dehydrogenase subunit 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH4 PE=1 SV=1
CDS Sequence (425 bp)
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTCAC
CTTTCTCGATGAGTAACATCTCCTCCCCGTCCGCCGCCGTGAGAAACCCAATCGGAAGAGAAATCTCTTC
GATCCCATTTTCCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGCAGTCTGATCTC
GCCAAATTCGCTCGTCTCCCGTCGTCTCGAGGGTACAGCAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGGATGGAAGAAGTTTTGGCGGATTACGTTCACCAGGAGATGACCAGGAATCT
GATGGTGATGTCTCTGGGCGTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA
Upstream Sequence
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTCAC
CTTTCTCGATGAGTAACATCTCCTCCCCGTCCGCCGCCGTGAGAAACCCAATCGGAAGAGAAATCTCTTC
GATCCCATTTTCCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGCAGTCTGATCTC
GCCAAATTCGCTCGTCTCCCGTCGTCTCGAGGGTACAGCAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGGATGGAAGAAGTTTTGGCGGATTACGTTCACCAGGAGATGACCAGGAATCT
GATGGTGATGTCTCTGGGCGTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA
Downstream Sequence
AGCAAGGAATCATCTTTTGGGGGGGGGGGGGCTCATGAACTCGATCATCTAGTGAGATAA
AGTCTCTTCTTGTTATTATCTTTTAATGAATAATGAACATTGGTGCAATGGCATCTTTAA
CCTTCCAAGTTTGCTCTGTTTGATTCAGTTTGTGTAAGGCTTTAAGTGGAATTCTAAGTG
TGTTTGAAAGGGATATTAAGAATCTCTCTTTGGATTGAATAAAATAGAAGTTTTCTCAGT
TCTGGTCCTTTTTTTTTGCAATTTTTATCAAATATGTGATCTCAGGTTTCTCTGGGGTAT
ATATTATGTCGAATTTGTGAATGCTTTATTGGTGTGATCTTGTACAAAGATGAGACTGTA
AAGAAGTAAGTTTGATCAGTCTCAGGATGTTCTTATGTTCCACAGCTGAAACGTTGAGTT
GGACATCATCTGATTCATAGATCTATTTGGTTTGTTGAGATACGCTCTGAGTTTCTATGG
TGTTTGTCGTATGAGCTACGTTCTGAACTCCCAACATCTATTGACCTTAAAGATTCATGA
TACATGCTCTAGCCCTGCACAATAGAGCGTCGGTTTCACTCGATAAGGTTTTCAGTTTCT
CGACTGTATAATGGGCTGAGCTTCTCAACTCATCCACAAGCCTCCCTCTTTCCTTCTTAA
ACGAATCACTCCTTCCAAAAAAAAAaAAAGTAATTaAGAACATATCCAATATGGCTCGAA
AAAAAAAAAAAACTAATTGGAAATGGTCTTGGCCTCGGTCTCATGCATAAAGTTCAGTTA
GAATTTATGCTCATGATTATCTACCTTCTTCAGGAATATGCAAGCTTGTTTTTATCGTCT
TTGAGGACTCGATTTGTCACTCAAAAATCATCTATGGAGAGCGAGAAGGAAGATTCTGTA
TTTATTTTCTGCTGAAGAAGAGAACACATCCCAAATGGTAGGGGAAAATATTGAATAATA
ATTATAGAGAAAATAATAAAAGGCCCAAATCTAAAACTTAATAAGGCCCAAACAAGTGGC
ATTTTATGTTAACTGGAAAATTACGATCTTTATCTCCAATACTAATAGTTATCATCCTAA
ACGGTGATATAATTACGATCATATCCCCAATATCCCCAAATCACTGACTTGCTTACCACT
CTAAGGTTAAAAAGAATAATCAACCGCGAAGGCACAACACATATGGTAAGAAATGGAATT
TAAGTACAAATATAATAATCGCCGTCACGTTTGACAATTCAAAGAGTAAACTTTTGTGTA
ATACGCGTCATCTACGCAAACTAGGTGACGACACGTGTAATCCATACCTTTCTCCCTTTT
CAAAAAACCTCTTTCTCTCTCTAAAGTCTATGACCCTTGTTTCTCTCTAGCTGCCTGATC
GAAGTATCGAACCCTAACTCACAGACCTTACTATTATTGGATCCTCCTTAAAGCTCCGTG
TCGCGTCCTCCTTTGCTCTTTGGTTCTTTCCTTCTGGTAAGAATCCACTCCCTTTCATGA
TACGTCACCGTTTTTGCTTCTTCTCGGTTTTTAGATTTGGTCGCCTATGGATCCCTGATC
AACTGGATTTGATTTCTAGGGTTTATTGCAAGAAGAAGAAGAAGCGATGGATTTGTGAAT
TTTAGTGATTATCGCGTCGGTTTGTTGTATCTCTATTTAGCAAAGTTCGTAGCTTTATCG
AAATCCTTGAAAGATGTCATCAGCTGATGTTACGTTAAGCCCGGTTCGTAACGAGCTATC
GATGATGATGCCTCTCGTCCATGCCAATTCCTGTGCTGATTCCCTCCCTGACGAGACCAT
TTTGATCTACCTGACACTCCCCGGAGCTTTGATACCAATGCGAGTGCTTGAATCTGATTC
CATCGAGTCCGTTAAGCTCCGGATCCAGTCTTACCGTGGGTTTGTAGTGAGGAACCAGAA
GCTCGTTTTCGGTGGGCGAGAGCTAGCGAGGAGTAACTCCAACATGCGTGACTACGGTGT
GAGTGATGGCAACGTTCTTC
Pro Sequence
MSLRRSILGLHRQTHNLSLSKASPFSMSNISSPSAAVRNPIGREISSIPF
SLTQKLKPDSGNRSLGQSDLAKFARLPSSRGYSNASLVRKIPVLFHINAG
MEEVLADYVHQEMTRNLMVMSLGVFQIIVIKDVIVFLFF
mRNA Sequence
ATGTCTCTCCGCCGCTCTATCCTCGGTCTCCACCGCCAAACCCACAACCTCTCCCTCTCAAAGGCGTCAC
CTTTCTCGATGAGTAACATCTCCTCCCCGTCCGCCGCCGTGAGAAACCCAATCGGAAGAGAAATCTCTTC
GATCCCATTTTCCCTAACCCAGAAACTGAAACCGGACTCCGGGAATCGTTCTCTTGGGCAGTCTGATCTC
GCCAAATTCGCTCGTCTCCCGTCGTCTCGAGGGTACAGCAACGCATCTCTCGTACGGAAGATCCCTGTTC
TGTTTCACATAAATGCAGGGATGGAAGAAGTTTTGGCGGATTACGTTCACCAGGAGATGACCAGGAATCT
GATGGTGATGTCTCTGGGCGTGTTCCAGATCATCGTTATCAAAGATGTCATCGTGTTTCTTTTCTTCTGA