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Detail for ZS11_A03G36520.t1

Genome:
ZS11: ZS11_A03G36520.t1
ZS11_v0: BnaA03T0327300ZS
WE: WE_C03G40600.t1
WE_v0: BnaC03T0325800WE
Darmor: A03p37550.1_BnaDAR
BH: BnaC03T418400BH
Quinta: BnaA03T0315200QU
ZS2: BnaC03T396300ZS2
SW: BnaA03T364700SW
Express61: A03p032710.1_BnaEXP
Xiaoyun: BnaC01G0458800XY
P202: BnaA03G029080P202.1
BL: BnaC03T418400BH
TA: BnaC01T446800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g34900D
RB: BnaA01T395200RB
No2127: BnaC03T0313500NO
P130: BnaA03G030720P130.1
Length: 133
KOG ID: KOG3426
KOG E-value: 2.540000e-94
KOG Score: 269.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03950 NDUFA6; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
NR Protein: XP_009120779.1
NR E-value: 4.700000e-70
NR Score: 268.9
NR Annotation: XP_009120779.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like [Brassica rapa]
SwissProt Protein: Q9LHI0|NDUA6_ARATH
SwissProt E-value: 1.080000e-93
SwissProt Score: 269.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=At3g12260 PE=2 SV=1
CDS Sequence (407 bp)
ATGGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTCGCC
GCCGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCTCCA
AGACGTCGTCGCGCCTTCCCAGCTCCGCTTCACAATCTCTGCTCAGATTCGTAACAACGCTCACGTCACC
GACCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCAA
AGCAGCGTCATCACATTATCGGTCAATACGTGGTGGGTGAAGGGCTCGTGCAGAATACAGGAAGCAAGGA
TCAAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGA
Upstream Sequence
TCTAAAACGACGTCGTTGTCTGTTTCTCCCTCAAATCGATTAGTAGCACTGTGCTCCTCTCTCATTTTGT
CTTCTTTGCCTTCGTTATCTCAGGAAGAGAAGAAAAGATTCTCGATTCAGCGATTGAACAAGCGTAAGAT
CAGATGGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTC
GCCGCCGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCT
CCAAGACGTCGTCGCGCCTTCCCAGCTCCGCTTCACAATCTCTGCTCAGATTCGTAACAACGCTCACGTC
ACCGACCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACG
CAAAGCAGCGTCATCACATTATCGGTCAATACGTGGTGGGTGAAGGGCTCGTGCAGAATACAGGAAGCAA
GGATCAAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCC
Downstream Sequence
GGTAACTTCCCCTAATCGTTCCCTGACTAAACTCAGAGCGTCAAATGGAAGTAGACTTTC
GTTGTCTCCGAATTGGTGAAGCGTCTTGACGAACCATTGAGCCTCTTTGCTTTTGACTTA
GTTGTTATCTATGTTTGAAAGTTGAGAGCTTTGGGGACTTAAATGTCCTGGGTAGTTGAG
TCTTTTCGAAGATAAAGTGTCTTGTGGAATGGGTGGTGGGTAGATAGTTTCTCAGAGCGG
AAAGGTGTGAGCTTTGGGGACTTTATCTTCTGGGTGGTCGAGTCTTATCTGTGATTCAAT
TGTCTTGTGTGTTGGGTGCTGGGTAGAGAGTTTCTCAGAGCTGAAGCTGGGAGCTTTACT
ACTCGTTACTTCCTGCTAAAGCTGTGTTACCTTGTGTGTTCCTTCTGTGTGTGACATTAG
ATACTTTCCTTCTTTGCATGGAAGCAGAAGTCGAAGTCACAATTCTATTTGGTACACTAT
GTTAAGGGTTGCTTGTGTGGCGATTTGTTTGCATTTTAAACCTTTAATTGAAAGCATCTT
CTTGTGTTTGGATGCACTGATCTCGTTTTTTTTTTGTTTTCTGTTGGCTCTCTCTTTTTG
GTGCTTTTAGAATGCAATCTATAGTATTCCTGATGATATACAGTGTGATAGCCTTAAAAG
CTTAACGAAAATGGAAGCAAAAGTTTTCTTGTGTTTGGATGCAGTGGTCTCGGGTTTTGT
TTTAGGATGCAATCCATAGTATTCCTGATGATAGTATTGCTTCTGCAGGTGATTGATCTT
CTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACGCAAAGCAGCGTCAT
CACATTATCGGTCAATACGTGGTGGGTGAAGGGCTCGTGCAGAATACAGGAAGCAAGGAT
CAAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCCTCAT
GTTTCCAGTATTGTATTGCATGACTTGAAGAAGTTTCTTCCCAATAATAATTAGACCTTT
TCATTTGTATGAGTTTGGTCAAACCTCTCTAAATTTTATCTGGAACAGTGTTTGTTGTGC
AGATATTTGCTATGATTTCAACTCTTCAGTATAAATTGAATTGGTCTGTTTGATTTATGA
CCACTTAAACAATCCAAGTTCCTGAAAGTGTATCTCATCTTTTGTCATGTTGGTTACTGA
CGACCTTACACTGATGAGCTCAATATTCAAAAACTATAAACATTCACTCTCTAGAAACTA
CACAACCTGATTGGCTAAAGATTACAACACACAACACAATCCGAGTCTTTGGGGATCTCA
GAACACCATTTGCAAAATCTGCAGTAAGAAGAGAAGACCTTTGCTTCGTGATCTCTTGGA
AGGTGTATTCCTACCGATTTTGAATTGTAAGATTATGTATAAAGGTGAGCAAAGCACTAC
TCTTGTGTATTCACTCTCTTGGCCGGGCAAGCCACAAGGAGCTAAGAGCACGTAGTCGAG
ATGAATAATCATGTATGGCAAGAAAAGCACGAGCTGACTGACGCGTTGTTAACACTCTAA
TCATCTGTTGCAGTGTCTGCAGCCTCAAGTTATCAGCCTGCCACCAAGAACTCCATTATT
AGTCAAATCACCTATGTATAAGATATCTCTCTTTCACATTACAAATGTACCTGGCGGATG
AATCCTTCGAGGGTGCCTAACTGTCCCATTGCCATGGCCATCTGACCCATGTAGCTCGCC
ACATTATCAGATGAACTGGAACCAAGAGTACCACTAGATAAAGTATCAGCTAATGATTGC
TGTAAACTCTCCATCCCTTGAGATAATGCATCTTCAGCCTGCTGGGACGTCTGTTGCAAG
CTATTTAAGCCCATCACCTGTCGCTCTGTCATCGGCTCCAGCTGATTCGCTATAAGCTGC
CAGCAAAAAATTATTGACCCATTATTTAGAGTTGGTTTGTTCATCAAAAAAAAATTCTAT
GAACTTGTGAAGAGCTCACC
Pro Sequence
MAAPFTLRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVV
APSQLRFTISAQIRNNAHVTDPKVIDLLLFKGMEELTDIVDHAKQRHHII
GQYVVGEGLVQNTGSKDQGKSDFLKNFYTSNYF
mRNA Sequence
TCTAAAACGACGTCGTTGTCTGTTTCTCCCTCAAATCGATTAGTAGCACTGTGCTCCTCTCTCATTTTGT
CTTCTTTGCCTTCGTTATCTCAGGAAGAGAAGAAAAGATTCTCGATTCAGCGATTGAACAAGCGTAAGAT
CAGATGGCGGCACCTTTCACGTTGAGGAAAATCGGCGTCCCTCCGAACTCAGCGAACCTGACGGAAGCTC
GCCGCCGTGTATTCGATTTCTTCAGAGCAGCCTGCAGATCCATCCCTACCATCATGGACATTTACAATCT
CCAAGACGTCGTCGCGCCTTCCCAGCTCCGCTTCACAATCTCTGCTCAGATTCGTAACAACGCTCACGTC
ACCGACCCTAAGGTGATTGATCTTCTTCTATTCAAGGGAATGGAAGAGCTGACTGACATAGTGGATCACG
CAAAGCAGCGTCATCACATTATCGGTCAATACGTGGTGGGTGAAGGGCTCGTGCAGAATACAGGAAGCAA
GGATCAAGGAAAGTCTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTCC