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Detail for ZS11_A03G53750.t1

Genome:
ZS11: ZS11_A03G53750.t1
ZS11_v0: BnaA03T0476500ZS
WE: WE_A03G53870.t1
WE_v0: BnaA03T0482200WE
Darmor: A03p54830.1_BnaDAR
BH: BnaA03T512900BH
Quinta: BnaA03T0459700QU
ZS2: BnaA03T499600ZS2
SW: BnaA03T535100SW
Express61: A03p047100.1_BnaEXP
Xiaoyun: BnaA03G0488700XY
P202: BnaA03G042120P202.1
BL: BnaA03T512900BH
TA: BnaC01T169900TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g13630D
RB: BnaA03T529400RB
No2127: BnaA03T0469300NO
P130: BnaC01G016740P130.1
Length: 244
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009767(photosynthetic electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
NR Protein: XP_013735056.1
NR E-value: 4.800000e-113
NR Score: 412.5
NR Annotation: XP_013735056.1 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [Brassica napus]
SwissProt Protein: Q9T0A4|NDHS_ARATH
SwissProt E-value: 1.090000e-141
SwissProt Score: 399.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhS PE=1 SV=1
CDS Sequence (745 bp)
ATGGCGACTTCTTCGATCACTATACCAACCATCATTCAGGGAACCAAGTTTCTCGGCCAAACACATCTAC
TTTCAACTCCAAACCGATCGGTTTTCCCTCCTCCAAAGCAGCAACCAAACGTTCATAAAGTAAAGGCCAT
GGCTAAGTTCAACCTATGGGAAGTGATGGGAGGAAGAGGATTATGCAACGGAGAGAAAGGCATCGAGAAG
GAGCTCAACAGGAACATAGAGAAAGAAACATCAAAGGCTTCTGATAACCAGACAGAGAAAGAGAGCTGCG
ACGACAGCAACTTGTCGTTTGAAGTACCTGAAGACGGTTTTGAGAAAGAGATGATGGGTCTCACCGGAGG
TTTCCCCGGTGGCGAAAAGGGACTCAAAACGTTCATTGAACAAAACCCACCACCACCACCTCCTACGAAA
CAAGGAGGCGATGTTGTAGCCATGGTTGCTACGGAGAAGAAGCCTAAAGCTCCGGAGCTACCGCTTCTCA
TGCCGGGGATGATCGCTATAGTCAAGAACACAAACAGTCCGTACCACATGTACTGTGGGATAGTGCAGAG
GATCACTGACGGGAAAGCTGGTGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTCATAACGTTCAGGCTT
GAAGAGCTTGAACGAAGAGAGAAAGGCCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTA
TCGAACAGATGCAAAAGGAGACAACAGCACCATAA
Upstream Sequence
ACATGTGGTCATTATAGCAAAGCCTTCTTCCTATCTTTCCTTACTTCACCTCAAAACTTTTCTTTGTCTA
ATGGCGACTTCTTCGATCACTATACCAACCATCATTCAGGGAACCAAGTTTCTCGGCCAAACACATCTAC
TTTCAACTCCAAACCGATCGGTTTTCCCTCCTCCAAAGCAGCAACCAAACGTTCATAAAGTAAAGGCCAT
GGCTAAGTTCAACCTATGGGAAGTGATGGGAGGAAGAGGATTATGCAACGGAGAGAAAGGCATCGAGAAG
GAGCTCAACAGGAACATAGAGAAAGAAACATCAAAGGCTTCTGATAACCAGACAGAGAAAGAGAGCTGCG
ACGACAGCAACTTGTCGTTTGAAGTACCTGAAGACGGTTTTGAGAAAGAGATGATGGGTCTCACCGGAGG
TTTCCCCGGTGGCGAAAAGGGACTCAAAACGTTCATTGAACAAAACCCACCACCACCACCTCCTACGAAA
CAAGGAGGCGATGTTGTAGCCATGGTTGCTACGGAGAAGAAGCCTAAAGCTCCGGAGCTACCGCTTCTCA
TGCCGGGGATGATCGCTATAGTCAAGAACACAAACAGTCCGTACCACATGTACTGTGGGATAGTGCAGAG
GATCACTGACGGGAAAGCTGGTGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTCATAACGTTCAGGCTT
GAAGAGCTTGAACGAAGAGAGAAAGGCCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTA
TCGAACAGATGCAAAAGGAGACAACAGCACCATAAGTCAAGAGAGAGATGTTTTGCTTTCATGTGAATGT
TATATGTAACGCTACCTTTGAGTTTAATAGGCTACAAGAACTCTGACTGG
Downstream Sequence
AGTCAAGAGAGAGATGTTTTGCTTTCATGTGAATGTTATATGTAACGCTACCTTTGAGTT
TAATAGGCTACAAGAACTCTGACTGGTTGTAAAAAAAACTTCATCATGTGATGTAAGAAA
ATAAATAATAAATCATGAGTTTGCAATTGGAGTTGTTGTTTTATTTTGGCATTGACATGA
GTTTACATAATAACCAAATCTTGACTCTTGAGTATATATTCTCGCCAATAGATCATTTTG
AAATGATCAGATGCAGCCTCCCAACTGTGAATATTTGAAATGGTTAAAGACTTATTTTAA
AATTTTGATCATCATTATCCAGCAAAACTTACTTACGAGTATGGCTTCCATTTCTTGGTT
TGAAACCGGCGTGCGCTTCGGCTGCAGAGACGCCTTCCCGCCTATAGTCTTTGGAGTGTT
GAGATTGGAGAAGAAAAACGCATTAGCTTCATTCTCCACCTGCTGCCTTGTGCCCTCTGT
TATTTCAAAAAAAGGTTTAAAAACTTTAAATGCTAAACATATATTCCATGTAAAACTGCC
ATAACAAATAGAGTTTCAACGATGATTTCAAACCTGAAGGTTTGACATGACGCTGAGGGA
ATTTGATGCGAGGAATCCTCTTTAACCCGTGAACTACGTTGTTCATCTCTTTCGCTCTTC
CTTCTCGTCCTCCGTACCGAGGTTTGACGGCGACTTTGTAAATTTTCTATGTTTCTCTTC
TGTGTCCGTTCTTCTTTGAACTTTGAAGTTTGAACCTTCGGCTTTGTTTTCTATTTTCTA
CGATCCTGGGCCTTTTACGATGGTTAGGCCCACCTAAGCATACGGCCTGTTTAGAAGCCC
TTGTTTTTTCCGATGTTTTGAATCGATTCCAGTCAATGTTCATGTAGCTTATTCTTTTAT
GCAACTCGGGAACAGATCTCAGAAATAGGTAATTTAGGCATTTAGCTATTGAAAACAATT
TTTATAGTGTTTCTATAAAATAGTGTACTATTATACTTTAGACTGACATTATAAGATTTG
TATTTTGGGGGTAAATAGTTTTATACTTTTCCTAAGATAAATAGTGATATTATTATTTTA
TGTAGTGGGACAATTAGAATATGAGTGTTTGAAGGGAAAAGATAGAATCAGGACTAGTCA
AGCCCCAAAATTCGGGTAAGCTTAAAACGCGTTATCTAAACTAAACACCTTTTGTTTCTT
TTCTTCTACTCTAATGCCGGTTATATGTATAAAACTCCATATTGTAATAAACTTTCTAAA
ATATACTACAAGTTTCTCAATATGTTTTACTAGTGATGATTTTAGTCGACGGCCTTTATA
TTAATTATTGACATATTTTCATACGGGAGTATATTCATCACGACATCGTAATCGACTATT
AAATCAAATATTTGATTAATTACGTAAAGAATCTGTGAGGAACACATGTGTTCATACTTG
TTGGTTTTGTTAGCTGTGTGGGGATATTATTAATACAAACATTAGAGTAGTATTACTGGT
TTTTCTTTTTTCTTTTTCTATTAGTAAGACTAATTCAGAATGGAGTAATTGACCATGTCA
TTTAGAATGGCCCTAGTGGCACGCCATCATTTTTGTTTGTGGAAATATATGTAATTAGAA
CCACTGGTCGATGATATGATCTTTCTGATAGATAATGATTTAAAATCGGATAAATGTGAC
AAATCATTTTTTTAAAGTGACAAATCATTTTCAGACGCATTAAGAGAGAAAACTTTAAAG
TCATGGTAAAGCTTTTGACTGATTAGTGACCTTTTTTTGTGCAACAATTGCATTAGACCA
TGACTCTTTTAATTGCTTCCAAGCTCATTAACAGAGACACAAATATAATATGCACACACA
AATTGCTATTAACAATTAGCTATATCTCTTTCTTTTCTTGTTTACCATTAACCTCTTAAA
ATTTATCAGTTATCTTCAATTAAACTTAAAACTTCTCGCAATCGACTGTGAACTAATGAA
CCTGTCAAAGGGGTTTGTGT
Pro Sequence
MATSSITIPTIIQGTKFLGQTHLLSTPNRSVFPPPKQQPNVHKVKAMAKF
NLWEVMGGRGLCNGEKGIEKELNRNIEKETSKASDNQTEKESCDDSNLSF
EVPEDGFEKEMMGLTGGFPGGEKGLKTFIEQNPPPPPPTKQGGDVVAMVA
TEKKPKAPELPLLMPGMIAIVKNTNSPYHMYCGIVQRITDGKAGVLFEGG
NWDRLITFRLEELERREKGPPGKNPKSCVLEPLIEQMQKETTAP
mRNA Sequence
ACATGTGGTCATTATAGCAAAGCCTTCTTCCTATCTTTCCTTACTTCACCTCAAAACTTTTCTTTGTCTA
ATGGCGACTTCTTCGATCACTATACCAACCATCATTCAGGGAACCAAGTTTCTCGGCCAAACACATCTAC
TTTCAACTCCAAACCGATCGGTTTTCCCTCCTCCAAAGCAGCAACCAAACGTTCATAAAGTAAAGGCCAT
GGCTAAGTTCAACCTATGGGAAGTGATGGGAGGAAGAGGATTATGCAACGGAGAGAAAGGCATCGAGAAG
GAGCTCAACAGGAACATAGAGAAAGAAACATCAAAGGCTTCTGATAACCAGACAGAGAAAGAGAGCTGCG
ACGACAGCAACTTGTCGTTTGAAGTACCTGAAGACGGTTTTGAGAAAGAGATGATGGGTCTCACCGGAGG
TTTCCCCGGTGGCGAAAAGGGACTCAAAACGTTCATTGAACAAAACCCACCACCACCACCTCCTACGAAA
CAAGGAGGCGATGTTGTAGCCATGGTTGCTACGGAGAAGAAGCCTAAAGCTCCGGAGCTACCGCTTCTCA
TGCCGGGGATGATCGCTATAGTCAAGAACACAAACAGTCCGTACCACATGTACTGTGGGATAGTGCAGAG
GATCACTGACGGGAAAGCTGGTGTGTTGTTCGAAGGAGGGAACTGGGACCGTCTCATAACGTTCAGGCTT
GAAGAGCTTGAACGAAGAGAGAAAGGCCCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTA
TCGAACAGATGCAAAAGGAGACAACAGCACCATAAGTCAAGAGAGAGATGTTTTGCTTTCATGTGAATGT
TATATGTAACGCTACCTTTGAGTTTAATAGGCTACAAGAACTCTGACTGG