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DETAIL

Detail for ZS11_A03G56730.t1

Genome:
ZS11: ZS11_A03G56730.t1
ZS11_v0: BnaA03T0503200ZS
WE: WE_C07G59530.t1
WE_v0: BnaA03T0509300WE
Darmor: A03p57920.1_BnaDAR
BH: BnaA03T539300BH
Quinta: BnaA03T0486000QU
ZS2: BnaA03T525600ZS2
SW: BnaC07T507400SW
Express61: A03p049670.1_BnaEXP
Xiaoyun: BnaA03G0514600XY
P202: BnaC07G090070P202.1
BL: BnaA03T539300BH
TA: BnaA03T505600TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11580D
RB: BnaC07T513400RB
No2127: BnaA03T0492400NO
P130: BnaA03G047520P130.1
Length: 610
KOG ID: KOG2495
KOG E-value: Not available
KOG Score: 956.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006116(NADH oxidation)
Cellular Component: -
Molecular Function: GO:0003954(NADH dehydrogenase activity),GO:0016491(oxidoreductase activity),GO:0005509(calcium ion binding)
KEGG Ortholog: K17871 ndh1; NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]
NR Protein: CDY29891.1
NR E-value: 1.200000e-306
NR Score: 1057.0
NR Annotation: CDY29891.1 BnaA03g49120D [Brassica napus]
SwissProt Protein: Q1JPL4|NDB1_ARATH
SwissProt E-value: Not available
SwissProt Score: 999.0
SwissProt Annotation: External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB1 PE=1 SV=1
CDS Sequence (1859 bp)
ATGACAATTCTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGTGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACAGGCTGGGCTGGTATAAGCTTTCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGTACTGTTGAAGCCAGAAGCATTGTTGAGTCTGTCCGCAACATTACCAAGAAGAAAAATGGAGAGAT
TGAATTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCAAACAACAAGGTTCTCTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCACTCGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AGGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGACGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTTGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTGCATG
ATTTTATCGAAGAGGATATCACCAAGATATACCCTTCGGTCAAGGAGCTTGTGAAGATAACACTCATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGTATTGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCTGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGGTTGATACTGTGGTCCACTGGTGTTGGGACTCGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGTCTTGGCGACCAACGAGTGGCTA
CAGGTGAAAGGATGTGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCAGCTGACGTGGACAACTCAGGGACATTGACGGAAGAAGAATTGCA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCTCAGGTTGAGCTCTACCTGAAAAGCAAGCATGTGAGG
AGTATCAAAGATCTTCTGACTGATTCAGAAGGTAACCCAAAGAAAGAGGTAGACATCAAGGCGTTTGAAT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAATAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGTTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTTCAGTACAAGCACTTTGGACAGTTTGCTCCATTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACAAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
ACCAAGGGTACTCTGGTCTCGGCTCTTGGTCACCTAAGCTCGGTTGGAGAGTCGATGGTGTGGGGTTTAG
CCACTTCTGTGCGATGGTCGTGCTTCAGTCAAACCGGTGCCGGAGCCGGTGAAGGTCAAAAGCTTTTTCG
AGCTCTATTTTAG
Upstream Sequence
ATGACAATTCTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGTGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACAGGCTGGGCTGGTATAAGCTTTCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGTACTGTTGAAGCCAGAAGCATTGTTGAGTCTGTCCGCAACATTACCAAGAAGAAAAATGGAGAGAT
TGAATTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCAAACAACAAGGTTCTCTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCACTCGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AGGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGACGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTTGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTGCATG
ATTTTATCGAAGAGGATATCACCAAGATATACCCTTCGGTCAAGGAGCTTGTGAAGATAACACTCATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGTATTGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCTGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGGTTGATACTGTGGTCCACTGGTGTTGGGACTCGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGTCTTGGCGACCAACGAGTGGCTA
CAGGTGAAAGGATGTGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCAGCTGACGTGGACAACTCAGGGACATTGACGGAAGAAGAATTGCA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCTCAGGTTGAGCTCTACCTGAAAAGCAAGCATGTGAGG
AGTATCAAAGATCTTCTGACTGATTCAGAAGGTAACCCAAAGAAAGAGGTAGACATCAAGGCGTTTGAAT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAATAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGTTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTTCAGTACAAGCACTTTGGACAGTTTGCTCCATTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACAAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
ACCAAGGGTACTCTGGTCTCGGCTCTTGGTCACCTAAGCTCGGTTGGAGAGTCGATGGTGTGGGGTTTAG
CCACTTCTGTGCGATGGTCGTGCTTCAGTCAAACCGGTGCCGGAGCCGGTGAAGGTCAAAAGCTTTTTCG
AGCTCTATTTTAG
Downstream Sequence
GTTTCACCTTTTTCACTTGTTTCCAGAAGTCAGAACCTTTTTATACTATATAGTTGCGTT
TTCTCAGATCTTCTTGTAACGCCTTTATCTCCAATCTTTTCCTTATAATAACCTTTAGTG
TTTGACTTAGGACAACGTTCTTGTTCTGTAAAATCTAATTCCTTTTTATTGACTTGGTCT
CAAAACTAGACATGTGTTTCACAATCTTGTTTGTGTCCTAGGCACCACCTTTTTGGATTT
GCACATTGAGAATGAGAATGTGTTGTATTCTTTACACATTTGACATTTGCAGTGGTGGGA
GTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAAGAAGAAGA
AAGTAGTGGTACTTGGCACAGGCTGGGCTGGTATAAGCTTTCTTAAAGATCTTGACATCT
CTTCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTAC
CTAGCGTCACTTGTGGTACTGTTGAAGCCAGAAGCATTGTTGAGTCTGTCCGCAACATTA
CCAAGAAGGTATCTTCTGATCTTTGGTCTCTCATCATCATCTGCTAAGCTTACAGACTTT
TGTTATCGCCAGAAAAATGGAGAGATTGAATTATGGGAAGCAGACTGTGTCAAGATCGAT
CCTGCAAACAACAAGGTTCTCTGCCAACCAGTTTTCAAGGATGACCCTGAAGCAAGCCAA
GAGTTTTCACTCGAGTACGACTACTTGATCATAGCGGTGGGAGCGCAGGTCAACACGTTT
GGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGACGCGCAGAGG
ATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAG
CAGAGAAGGACAAAGCTTCATTTTGTTATAGTTGGAGGTGGTCCTACTGGTGTGGAGTTT
GCAGCTGAGTTGCATGATTTTATCGAAGAGGATATCACCAAGATATACCCTTCGGTCAAG
GAGCTTGTGAAGATAACACTCATTCAATCTGGAGATCATATCTTGAATTCGTAAGTCAAA
AGACTCTATGGTAGCTTCTAGCCATGTGCATTTAGTTCTAGGTTCGGTTTAGAGGTTTAC
GATCTGTTTGGGTATTTAGGAAAATTAATTTAGTTATTTTGGTTTTCGGTTCGGTTCGGA
TAGCAAAGCTGGAAACCGGCTGATATCCGAGGTAATTTGTTCCGGTTTGGTTCCAATTTT
TTGGTTAATTTGGGTTAAAAAATCAGCAATCTCAGGATTTTTTTGGATTAAATATCAGAT
TTTTTGGGGTTTTTTGATAATAACTTGATCATTCGGATAATTTTAAAAATATTTCAGATA
AAATATATTCTGGTAATTGTGGATTTTGGTTAAAATAATATTTTTAAATTATTTAATTAT
CTTAAAACTAAATATAGCTAAGATTTATACATATATCAATTCAGCTATCTATTCGGTTCT
TAGTTCAGTTTTAGTTCTTTAGGTTCTAGAAATACATGATCCTGAGTTCGGGTAATTGAT
AGGATCCAAACTCGTACCGAACCTCGTTTTTCGGTTCGTTCGGTTTTTCAGTTCCGGATA
AATGTGCCAAGGCCTAGTAGCTTTGTCTTGGTTGTGGAGTTTGACAAGTGATTGTTGTTG
TCACAGGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGAGATGGTAT
TGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCTGATAAAGACATCTCTGTGAAGAT
CAAATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGGTTGATACTGTGGTCCACTGGTGT
TGGGACTCGTCCAGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGT
CTTGGCGACCAACGAGTGGCTACAGGTGAAAGGATGTGAGAATGTGTATGCAGTTGGAGA
CTGTGCTTCCATAGCTCAAC
Pro Sequence
MTILSSLGRASRSAPLASKLLLLGTLSGGSLVAYSDSNKKEEEQKQKKKK
VVVLGTGWAGISFLKDLDISSYDVQVVSPQNYFAFTPLLPSVTCGTVEAR
SIVESVRNITKKKNGEIELWEADCVKIDPANNKVLCQPVFKDDPEASQEF
SLEYDYLIIAVGAQVNTFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKA
VLPGLTEEQRRTKLHFVIVGGGPTGVEFAAELHDFIEEDITKIYPSVKEL
VKITLIQSGDHILNSFDERISSFAEQKFLRDGIDVLMGMRVMSVSDKDIS
VKIKSSGEVVSLPHGLILWSTGVGTRPVISDLMEQVGQGGRRVLATNEWL
QVKGCENVYAVGDCASIAQRKIMGDIANIFKAADVDNSGTLTEEELQDVV
EDINVRYPQVELYLKSKHVRSIKDLLTDSEGNPKKEVDIKAFESALSGVD
SQMKSLPATAQVAAQQGSYLAKCFNKMEHCKEHPEGPKRFRTGGHHQFRP
FQYKHFGQFAPLGGDQAAAELPGDWVSAGRSTQWLWYSVYASKQVSWRTR
ALVVSDWTRRTKGTLVSALGHLSSVGESMVWGLATSVRWSCFSQTGAGAG
EGQKLFRALF
mRNA Sequence
ATGACAATTCTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGTGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACAGGCTGGGCTGGTATAAGCTTTCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGTACTGTTGAAGCCAGAAGCATTGTTGAGTCTGTCCGCAACATTACCAAGAAGAAAAATGGAGAGAT
TGAATTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCAAACAACAAGGTTCTCTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCACTCGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AGGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGACGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTTGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTGCATG
ATTTTATCGAAGAGGATATCACCAAGATATACCCTTCGGTCAAGGAGCTTGTGAAGATAACACTCATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGTATTGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCTGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGGTTGATACTGTGGTCCACTGGTGTTGGGACTCGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGTCTTGGCGACCAACGAGTGGCTA
CAGGTGAAAGGATGTGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCAGCTGACGTGGACAACTCAGGGACATTGACGGAAGAAGAATTGCA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCTCAGGTTGAGCTCTACCTGAAAAGCAAGCATGTGAGG
AGTATCAAAGATCTTCTGACTGATTCAGAAGGTAACCCAAAGAAAGAGGTAGACATCAAGGCGTTTGAAT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAATAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGTTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTTCAGTACAAGCACTTTGGACAGTTTGCTCCATTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACAAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
ACCAAGGGTACTCTGGTCTCGGCTCTTGGTCACCTAAGCTCGGTTGGAGAGTCGATGGTGTGGGGTTTAG
CCACTTCTGTGCGATGGTCGTGCTTCAGTCAAACCGGTGCCGGAGCCGGTGAAGGTCAAAAGCTTTTTCG
AGCTCTATTTTAG