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Detail for ZS11_A03G61900.t1

Genome:
ZS11: ZS11_A03G61900.t1
ZS11_v0: BnaA03T0546100ZS
WE: WE_A03G62510.t1
WE_v0: BnaA03T0551900WE
Darmor: A03p63090.1_BnaDAR
BH: BnaA08T165700BH
Quinta: BnaA03T0527700QU
ZS2: BnaA03T571200ZS2
SW: BnaA03T607300SW
Express61: A03p053750.1_BnaEXP
Xiaoyun: BnaA03G0559000XY
P202: BnaA03G048180P202.1
BL: BnaA08T165700BH
TA: BnaA03T552000TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g03430D
RB: BnaA03T605000RB
No2127: BnaA03T0521600NO
P130: BnaA03G051860P130.1
Length: 117
KOG ID: KOG3466
KOG E-value: 1.060000e-69
KOG Score: 205.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006120(mitochondrial electron transport, NADH to ubiquinone)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03965 NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
NR Protein: XP_009138321.1
NR E-value: 3.400000e-64
NR Score: 249.2
NR Annotation: XP_009138321.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Brassica rapa]
SwissProt Protein: Q945M1|NDUB9_ARATH
SwissProt E-value: 4.530000e-83
SwissProt Score: 241.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana OX=3702 GN=CIB22 PE=1 SV=1
CDS Sequence (359 bp)
ATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGCGAGCGGCGCAGAAGGAGAGGGTTCGAATCCTCT
ATCGACGTGCCCTTAAGGATACTCTCAATTGGGCTGTTCATCGTCACATTTTCTACCGAGACGCGTCTGA
TCTGCGCGAGAAGTTCAACGCCAACCAAGATGTGGAGGATGTTGACAGAATCGACAAACTGATTGCTCAT
GGTGAAGCAGAATACAACAAGTGGCGGCACCCTGATCCTTACATCGTTCCATGGGCTCCTGGTGGCTCTA
AGTTCTGTAGAAACCCCACTCCACCTGCTGGGATTGAGATCGTGTACAACTATGGTCAAGAAGACAACCC
ATGA
Upstream Sequence
TGTTGTAAAAGAGAAATCAGATAGAGGAAGAGAGAGAGAGGGTCTCGCAAAAATCAATCGGAAGGCAGGA
GAATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGCGAGCGGCGCAGAAGGAGAGGGTTCGAATCCT
CTATCGACGTGCCCTTAAGGATACTCTCAATTGGGCTGTTCATCGTCACATTTTCTACCGAGACGCGTCT
GATCTGCGCGAGAAGTTCAACGCCAACCAAGATGTGGAGGATGTTGACAGAATCGACAAACTGATTGCTC
ATGGTGAAGCAGAATACAACAAGTGGCGGCACCCTGATCCTTACATCGTTCCATGGGCTCCTGGTGGCTC
TAAGTTCTGTAGAAACCCCACTCCACCTGCTGGGATTGAGATCGTGTACAACTATGGTCAAGAAGACAAC
CCATGAACCTAACTTTCTTGTTTTCATATCCATCAATAAAGATTGAAGCATCATCCGGTGGCTATGGTTC
AGAGGATAAAATTCAAGACTTTCAAAAGTTGAAACTTTGAGTGACAACAAATTGTAGTTTTCAAAAGATG
TTTCGTTTCAATAAGACACTCTTGTTTGTTGTTTCAACTTGTTTTATATTTCTTTCAATCTAAAACAAGC
ATGTCATCATGAATCATGGAAGTTCATGAAAACTTATCAGTAAACAACAAAAGTGTATTATGTTTTACCT
ACAATGGCTCATAAATT
Downstream Sequence
GTAAGTTCTATTAATTATTCCTCAGATCAGATCTCCGATTCGGACTTTGGACTCTTTCTT
CGCGTTTTGGGGTTCATTGATCTCTTACTTTCATTTTCAGGCGTCTGATCTGCGCGAGAA
GTTCAACGCCAACCAAGATGTGGTATTGTTTCTCTTTGATTTGATTTAATTTGGTAGAGA
GTGACGTTAGAGCTATGTAAGAGTGTAATGATGAGAAAGTTTGGGGCTTTAGATGTGAAT
AGAGTGTTTTGATGAGAAAGTTGAAGGCTTTTTGCTGTGGATGGAGTGTTTTTGATTACT
CTTGTCTACTAGACTTGGATGTTCAGCTTCCTTCTAATATAAAATACTTGAAATGTGCTA
GCTTGGTTCACTCGTGTTAACATACTTACAAGAAAAGAGAAAACTTGAAATGGTGTTCCA
TAGTTCTTGTGCTGCTTTTGGCGATGCATTTAGCTCCATGTTAATTTCATCTACTTAAGT
TACAGTGAAATTATGTATTCTTCCAACTACTAACTAGATAACAACATTAGTGGTTGCGTG
TATTTACCCTTTTGAAGATATCGTCTTTGTTTCTCATTGTTTGTTCCTTTAATTGTGGCT
TCTTGTAGGAGGATGTTGACAGAATCGACAAACTGATTGCTCATGGTGAAGCAGAATACA
ACAAGTGGCGGCACCCTGATCCTTACATCGGTAAGCATCTCGACCCATGAATGAAATCCC
TCTCACTCTCAGGCTAGAGAACAAGAACTTAACAACTCACTTTTTTATTTGTAGTTCCAT
GGGCTCCTGGTGGCTCTAAGTTCTGTAGAAACCCCACTCCACCTGCTGGGGTAATTTTTT
CTTCTCTGCATTTTCCAATGTCATGATCTCACTCTCTTATTCACAAATGCTGATTTTTTT
TCTTCTGACTGATGTAGATTGAGATCGTGTACAACTATGGTCAAGAAGACAACCCATGAA
CCTAACTTTCTTGTTTTCATATCCATCAATAAAGGTAAGTTGGATAGCTACCAGATGCTT
AATGTAACCTACCAAATAGTTTCGTTTCAGTCTCATTTACGTCTTTTCTGTGATAAAAAA
GCCGCAGCAGTACCACAAAGTTGCTAAGTTTCGATGGTGTTTGTTATCTATTGCAGATTG
AAGCATCATCCGGTGGCTATGGTTCAGAGGATAAAATTCAAGACTTTCAAAAGTTGAAAC
TTTGAGTGACAACAAATTGTAGTTTTCAAAAGATGTTTCGTTTCAATAAGACACTCTTGT
TTGTTGTTTCAACTTGTTTTATATTTCTTTCAATCTAAAACAAGCATGTCATCATGAATC
ATGGAAGTTCATGAAAACTTATCAGTAAACAACAAAAGTGTATTATGTTTTACCTACAAT
GGCTCATAAATTGTTTGTTCTTCTGTCACTTGTTTTGACAATCAACTTGTCCAAAAACGC
AGAGTATCAACACACTCCAAATCTATTGGATATTCAATCTTGAACCATTGTCCACAGGTC
GGAAAGTTTGGATAGGTAGGAATGGTATTAGATCACAGATCGTATATCCAACCTGGGAAT
CTGGACCGGTCCCAGCACACTTATGTCGTCACGCACCACTTGGGTATTTTTAAGGACCAT
GGTCGAGAAATGTAAAAGATCAACTTGATAGCAAAAATGCTGATTCCAAACCCAAATTGA
TAAATACTCAAAGCATATATGTTATAGGATTGGATTCTACCCAAATACTGTTTCAATTTT
AGCCAAAGAAAATAGAGCTTGATGATAAAAAAGATTGTTTTAAAATTTATTATATAGTTC
AGATTCCCAATTTACCATCATATTTTGAAGATATGATGACTTACACCTAGTAAATAAATC
AAATACAGAACATAGTATCAATGTCATATGTATATTTGCGACAAAAAAAAATACAACTTC
TCTTTGTCTAAGTATCCTAACACAGACAAAACACCACCAAACACAGCTTTTCTTTGTCTA
AGTATCCTAACGCAGACAAA
Pro Sequence
MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLRE
KFNANQDVEDVDRIDKLIAHGEAEYNKWRHPDPYIVPWAPGGSKFCRNPT
PPAGIEIVYNYGQEDNP
mRNA Sequence
TGTTGTAAAAGAGAAATCAGATAGAGGAAGAGAGAGAGAGGGTCTCGCAAAAATCAATCGGAAGGCAGGA
GAATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGCGAGCGGCGCAGAAGGAGAGGGTTCGAATCCT
CTATCGACGTGCCCTTAAGGATACTCTCAATTGGGCTGTTCATCGTCACATTTTCTACCGAGACGCGTCT
GATCTGCGCGAGAAGTTCAACGCCAACCAAGATGTGGAGGATGTTGACAGAATCGACAAACTGATTGCTC
ATGGTGAAGCAGAATACAACAAGTGGCGGCACCCTGATCCTTACATCGTTCCATGGGCTCCTGGTGGCTC
TAAGTTCTGTAGAAACCCCACTCCACCTGCTGGGATTGAGATCGTGTACAACTATGGTCAAGAAGACAAC
CCATGAACCTAACTTTCTTGTTTTCATATCCATCAATAAAGATTGAAGCATCATCCGGTGGCTATGGTTC
AGAGGATAAAATTCAAGACTTTCAAAAGTTGAAACTTTGAGTGACAACAAATTGTAGTTTTCAAAAGATG
TTTCGTTTCAATAAGACACTCTTGTTTGTTGTTTCAACTTGTTTTATATTTCTTTCAATCTAAAACAAGC
ATGTCATCATGAATCATGGAAGTTCATGAAAACTTATCAGTAAACAACAAAAGTGTATTATGTTTTACCT
ACAATGGCTCATAAATT