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Detail for ZS11_A01G15180.t1

Genome:
ZS11: ZS11_A01G15180.t1
ZS11_v0: BnaA01T0134800ZS
WE: WE_A01G15800.t1
WE_v0: BnaA01T0056700WE
Darmor: A01p15200.1_BnaDAR
BH: BnaA01T151100BH
Quinta: BnaA01T0068400QU
ZS2: BnaA01T144400ZS2
SW: BnaA01T150600SW
Express61: A01p013640.1_BnaEXP
Xiaoyun: BnaA01G0142000XY
P202: BnaA01G010610P202.1
BL: BnaA01T151100BH
TA: BnaA01T145900TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g13630D
RB: BnaA01T148000RB
No2127: BnaA01T0103000NO
P130: BnaC01G016740P130.1
Length: 194
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009767(photosynthetic electron transport chain)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K00345 ndhS; NAD(P)H-quinone oxidoreductase subunit S, chloroplastic [EC:7.1.1.-]
NR Protein: XP_013711870.2
NR E-value: 2.300000e-105
NR Score: 386.7
NR Annotation: XP_013711870.2 NAD(P)H-quinone oxidoreductase subunit S, chloroplastic-like [Brassica napus]
SwissProt Protein: Q9T0A4|NDHS_ARATH
SwissProt E-value: 3.190000e-113
SwissProt Score: 325.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit S, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhS PE=1 SV=1
CDS Sequence (593 bp)
ATGGGTAAGTTCAATCTATGGGAGGTGATGGGAGGAAGGGGACTATGCAACGGAGAGAAAGGTATCGAGA
AGGAGCTCCAGAGGAACATAGAGGAAGAGACATCGAAGACTGAGAACCAGACCAAGAAAGAGAGTGACGA
CAATAGCTTGTCGTTTCAAGTTCCTGAAGACGGTTTCGAGAAAGAGATGATGGGTCTCACCGGAGGCTTC
CCCGGCGGCGAGAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCACCACCTAAGCAAGGAAGCG
GCGATGTTGTGTCCACATTTGCCACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGCCGGG
GATGATAGCTATAGTCAAGAACTCAAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGATCACG
GACGGGAAAGCTGGCGTATTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAGGAGC
TTGAAAGAAGAGAGAAAGGACCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTGAACA
GATGCAAAAGGAAGCAGCACCCTAA
Upstream Sequence
ATGGGTAAGTTCAATCTATGGGAGGTGATGGGAGGAAGGGGACTATGCAACGGAGAGAAAGGTATCGAGA
AGGAGCTCCAGAGGAACATAGAGGAAGAGACATCGAAGACTGAGAACCAGACCAAGAAAGAGAGTGACGA
CAATAGCTTGTCGTTTCAAGTTCCTGAAGACGGTTTCGAGAAAGAGATGATGGGTCTCACCGGAGGCTTC
CCCGGCGGCGAGAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCACCACCTAAGCAAGGAAGCG
GCGATGTTGTGTCCACATTTGCCACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGCCGGG
GATGATAGCTATAGTCAAGAACTCAAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGATCACG
GACGGGAAAGCTGGCGTATTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAGGAGC
TTGAAAGAAGAGAGAAAGGACCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTGAACA
GATGCAAAAGGAAGCAGCACCCTAA
Downstream Sequence
AAGTTGAATCTACTCTCTACTCTCACTGTGAATTGTATATGTAATAATGTAAACGTACCT
TCAAGGTTTTCTGACTGGTTCTAGAAAAATATTCAGCAATGTAATATAAAAATCCATGAA
TTCCAAATAATTAATAGGGAGTAAAATGCAATCAATCAGTGTATATAATAGAAGTAAAAA
AGGTTTTTAAAGACTGCAAATTGAGTCTGTTTTATTGTGTCAAAGACATCAACCAAATCT
TGAGTCGTGAGTATATTCTGAATGGCGAAGAAGAGAAGAGGTCCACACCATCTCTATGAT
CAGATGCAGCCTCCCAACTGTGAAAGATTGAGCAGAAAAAGGACAAGCAGGTTAGAAAAA
AATCAACTCAATGTTCAATTTTTTTAAGCGATAAACTTAGTAGTTGGTTGGTAAGTAGTT
AGGAGAATAACCTCAGACATGTGTAAGCAAACTTTAAAAAAAAAAACACTGTGAAAGACT
TCATTTACAACAACAACAAGTAACGTACCAAAATGGCTTCCATCTCCTCGTTTGAAACAG
GGGTGCGCTTGGGCTGCAACGAGGCCTTCCCGCCTATAGTCGTCTTTGGGGAGGTGTTGA
GGTTGGAGAAGAAGAATGTATCTGCTTCATTCTCCACCTGCTTCGCTCCCTCTGTAATTT
TATCATAAAGGTTAAAACTTTTAACACCCCCAATTGTCACAAGCTTAAACAAACTACAAA
TGACTGATAAAAGAAAAAGAAAAGCAACTTATATCATTTTCCAGCAGAAAAGGACAAAGA
AAGTGATGATTTCAGACATAAACACATCATCATGTACGAGGAATCCGTTTTCTTACACAA
AATCATAAACCAACAtgttctcgatacgtttcatatcctaacagtcttaagaatctagag
accgtgaatatatatatatatatatatatatataaaacacatgcAAATCGATGGATCATT
GGGGTGTTTTCACCAGATCGGGGAATATTAGAATACAAATCATGAAACTTGTTGTTAAAA
CGAAGAAGGAGATAGAGAGATTCAGCTCTGCATAGGAGAGAGATCAAAACCTGAAGGTTT
GAGGTGACGCTGAGGGAACTTAATGCGAGGAATCCTCTTCAATCCATGTACGACGTTCAT
CTCTTCTCTCCCTTCTCGTTCGTTCGTTCGTGTGTTGCCCAATGGAGAATGTTGACGGCG
ACTTTGGAAATTTTCTGTCTCTTCTTCGAACCTTCTTCGGCTTTAGTTTTCAGTTTTCTA
CAAGCGTGGGCCATTATGATGTAGTTAAGCCCATTTAAGTTATACAGCCCATTTAATTAG
CCCTTTCGATGTTTTCTATTTTCCGGTATTCTCCGGTTTTTGTATTGCAGTACCAAAGGG
AAATCGATCCCGGTTCGCCCAATGTTTTGTCTAAGGTTCCTACTCCTCTCGACTCTTGTG
TAGTGTAGGCCAGTGGTCTAATTAAGTGACACTGCATTGGTTTATCTCAGTCACCGGAAT
TCGAATATGTTCCTTTCTTTGGAGTAAATTGAGGTTTTGTGAATTTTAAAATCACTGAAT
TTAAATTGCAATACATATATAGAAGGTGATATTGGTAAGAACATGCCCAGAGTGAATGTG
TGATTGGTAAGAACATGACCAATCGGGTGATCATTCTGCCAATTCACCATTTTGTAAGCT
ATCAAACATATTCTTTTTTATTGGGCAAAGTTATCAAACATATTCTTGCCATAGTTTCCA
TAGATTAAGTTTTGTGTTTGTGAATTTCTAATAATATTAACCATGGTGAGTGGCATGTGA
TTCTGGATTCGAAATGCTCTCACTATACTCTATCGTATAGCCACGTATCTATACGATAGA
TATACAAGTCCATTGTTACAGTCCATTTAAATATTCACATTAAAAATATATctgagtatt
gtatctctatttaaaaattagtttcgacttttctataggttttagatacccacagattaa
taaaaaaaattatacatAAT
Pro Sequence
MGKFNLWEVMGGRGLCNGEKGIEKELQRNIEEETSKTENQTKKESDDNSL
SFQVPEDGFEKEMMGLTGGFPGGEKGLKTFIEQNPPPPPKQGSGDVVSTF
ATEKKPRAPELPLLMPGMIAIVKNSNSPYHMYCGIVQRITDGKAGVLFEG
GNWDRLITFRLEELERREKGPPGKNPKSCVLEPLIEQMQKEAAP
mRNA Sequence
ATGGGTAAGTTCAATCTATGGGAGGTGATGGGAGGAAGGGGACTATGCAACGGAGAGAAAGGTATCGAGA
AGGAGCTCCAGAGGAACATAGAGGAAGAGACATCGAAGACTGAGAACCAGACCAAGAAAGAGAGTGACGA
CAATAGCTTGTCGTTTCAAGTTCCTGAAGACGGTTTCGAGAAAGAGATGATGGGTCTCACCGGAGGCTTC
CCCGGCGGCGAGAAGGGACTCAAAACGTTCATCGAACAAAACCCACCACCACCACCTAAGCAAGGAAGCG
GCGATGTTGTGTCCACATTTGCCACGGAGAAGAAGCCGAGAGCTCCAGAGCTACCGCTTCTCATGCCGGG
GATGATAGCTATAGTCAAGAACTCAAACAGTCCTTACCACATGTACTGTGGGATAGTGCAGAGGATCACG
GACGGGAAAGCTGGCGTATTGTTCGAAGGAGGGAACTGGGACCGTCTGATAACGTTCAGGCTTGAGGAGC
TTGAAAGAAGAGAGAAAGGACCACCGGGTAAGAATCCAAAGTCTTGTGTTCTTGAGCCTCTTATTGAACA
GATGCAAAAGGAAGCAGCACCCTAA