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Detail for ZS11_A01G00170.t1

Genome:
ZS11: ZS11_A01G00170.t1
ZS11_v0: BnaA01T0003600ZS
WE: WE_scaffold0003G02930.t1
WE_v0: Bnascaffold286T0002000WE
Darmor: A01p00210.1_BnaDAR
BH: BnaA01T002100BH
Quinta: BnaA08T0190400QU
ZS2: BnaA01T002400ZS2
SW: BnaA01T002800SW
Express61: A01p000250.1_BnaEXP
Xiaoyun: BnaA01G0002600XY
P202: BnaA01G000230P202.2
BL: BnaA01T002100BH
TA: BnaA01T002300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g00350D
RB: BnaA01T001300RB
No2127: BnaA08T0166400NO
P130: BnaA01G000230P130.2
Length: 367
KOG ID: KOG1542
KOG E-value: Not available
KOG Score: 684.0
KOG Annotation: Posttranslational modification, protein turnover, chaperones
Biological Process: GO:0006508(proteolysis)
Cellular Component: -
Molecular Function: GO:0008234(cysteine-type peptidase activity)
KEGG Ortholog: K01373 CTSF; cathepsin F [EC:3.4.22.41]
NR Protein: CDY41960.1
NR E-value: 3.600000e-213
NR Score: 745.7
NR Annotation: CDY41960.1 BnaA01g05320D [Brassica napus]
SwissProt Protein: P43296|RD19A_ARATH
SwissProt E-value: Not available
SwissProt Score: 684.0
SwissProt Annotation: Cysteine protease RD19A OS=Arabidopsis thaliana OX=3702 GN=RD19A PE=1 SV=1
CDS Sequence (1119 bp)
ATGGATCTTCTTAAGCTTTCCTTCTCCCTTCTCCTCCTTTCCTTCCTCCTCGTCTCCGTCTCCTCATCGT
CCGACGGCGACGATGCCGTGATCCGGCAGGTGGTTGATGGAGCCGCCGAGCCAAATGTTTTATCCTCGGA
AGATCACTTTTCTCTGTTCAAGAGCAAGTTCGGAAAGGTCTACGCTTCCGGGGAGGAGCATGATTACAGA
TTCTCCGTCTTCAAAGCCAATCTGAGGCGAGCGAGGCGCCACCAGAAGATGGATCCCTCTGCGCGTCACG
GCGTTACTCAGTTCTCGGATCTGACTCGGTCTGAGTTCAGGGAGAAGCATCTCGGAGTCAAAGGAGGGTT
TAAGCTTCCTAAAGACGCCAACAAAGCTCCGATTCTCCCAACCGAGAATCTCCCTGAGGATTTTGATTGG
AGAGATCACGGAGCCGTCACCCCCGTCAAAAATCAGGGATCATGCGGCTCTTGCTGGAGTTTCAGCGCCA
CCGGAGCTCTTGAAGGTGCTAACTTCCTCGCCACCGGCAAACTCGTCAGCCTTAGCGAACAACAGCTCGT
CGACTGTGATCATGAGTGTGACCCAGAGGAGGCGGGTTCATGCGACTCTGGTTGCAATGGTGGCCTCATG
AACAGCGCTTTTGAATACACCCTCAAAACCGGAGGTCTCATGAGAGAAGAAGACTATCCTTACACCGGCA
AGGACGGCCCCGTCTGCAAGTTAGACAAGTCCAAGATCGTTGCCTCTGTCTCCAACTTCAGTGTCATCTC
CATCGACGAAGACCAGATTGCTGCCAACCTTGTTAAAAACGGACCTCTTGCAGTAGCCATCAACGCCGCC
TATATGCAGACTTACATTGGCGGAGTATCCTGCCCTTACATTTGCACCAGGAGGCTCAACCACGGTGTCT
TATTGGTGGGTTATGGGTCCGCTGGTTACGCTCCTGCTAGGTTCAAGGAGAAGCCTTACTGGATCATCAA
GAACTCGTGGGGAGAGACTTGGGGCGAGAATGGTTTCTACAAGATCTGCAAAGGCCGTAACATTTGTGGC
GTTGATAGTCTTGTCTCCACCGTTACAGCCGCTGTGTCTACCACCGCTCATTAA
Upstream Sequence
TAAATATCTTCCGATTTTTCCGACAAAACTAAAACAATATCTAAAAAGCTTTATATTACATACATACAAT
CACTTGTTGCGTGTGAAAGAGATAGATTCTTCCCCAGCCCTTTTAACTTTGCCTTTAGGGTTCATCTTCT
TCTATATTTAATCCCTTCCTCCCTCATTTCATTCAATCTCAAATCACAATGGATCTTCTTAAGCTTTCCT
TCTCCCTTCTCCTCCTTTCCTTCCTCCTCGTCTCCGTCTCCTCATCGTCCGACGGCGACGATGCCGTGAT
CCGGCAGGTGGTTGATGGAGCCGCCGAGCCAAATGTTTTATCCTCGGAAGATCACTTTTCTCTGTTCAAG
AGCAAGTTCGGAAAGGTCTACGCTTCCGGGGAGGAGCATGATTACAGATTCTCCGTCTTCAAAGCCAATC
TGAGGCGAGCGAGGCGCCACCAGAAGATGGATCCCTCTGCGCGTCACGGCGTTACTCAGTTCTCGGATCT
GACTCGGTCTGAGTTCAGGGAGAAGCATCTCGGAGTCAAAGGAGGGTTTAAGCTTCCTAAAGACGCCAAC
AAAGCTCCGATTCTCCCAACCGAGAATCTCCCTGAGGATTTTGATTGGAGAGATCACGGAGCCGTCACCC
CCGTCAAAAATCAGGGATCATGCGGCTCTTGCTGGAGTTTCAGCGCCACCGGAGCTCTTGAAGGTGCTAA
CTTCCTCGCCACCGGCAAACTCGTCAGCCTTAGCGAACAACAGCTCGTCGACTGTGATCATGAGTGTGAC
CCAGAGGAGGCGGGTTCATGCGACTCTGGTTGCAATGGTGGCCTCATGAACAGCGCTTTTGAATACACCC
TCAAAACCGGAGGTCTCATGAGAGAAGAAGACTATCCTTACACCGGCAAGGACGGCCCCGTCTGCAAGTT
AGACAAGTCCAAGATCGTTGCCTCTGTCTCCAACTTCAGTGTCATCTCCATCGACGAAGACCAGATTGCT
GCCAACCTTGTTAAAAACGGACCTCTTGCAGTAGCCATCAACGCCGCCTATATGCAGACTTACATTGGCG
GAGTATCCTGCCCTTACATTTGCACCAGGAGGCTCAACCACGGTGTCTTATTGGTGGGTTATGGGTCCGC
TGGTTACGCTCCTGCTAGGTTCAAGGAGAAGCCTTACTGGATCATCAAGAACTCGTGGGGAGAGACTTGG
GGCGAGAATGGTTTCTACAAGATCTGCAAAGGCCGTAACATTTGTGGCGTTGATAGTCTTGTCTCCACCG
TTACAGCCGCTGTGTCTACCACCGCTCATTAATTTAAGCCAAGAGGCTTCGTTAAATAAATTAATTCACT
CTGGTGATTTGTGTGAGCGAGCACTCTTTGCATTGACTCTTTATTTCTCTCTGCTTTTTTTTAAAGAAAG
ATGAAGTTTGTAAATAAATTGCATCCTTTTTTAAGCAAATCCATATCATGACAATCACGGTTGAGTTGAA
ATATTGAAGATAAGACGACGCACAACGTTCTTATATGAGCCTGC
Downstream Sequence
GGTATTATTGCATTAATAGATGATGACGTCAAGTTTGTATTGGTCTGATCTCAGATTTGA
CTTGTTATGATAGGGATCATGCGGCTCTTGCTGGAGTTTCAGCGCCACCGGAGCTCTTGA
AGGTGCTAACTTCCTCGCCACCGGCAAACTCGTCAGCCTTAGCGAACAACAGCTCGTCGA
CTGTGATCATGAGGTTTCACTTTTCTTTTATGGCATTTTTAACATATAAAGGATTAAAGA
TTAATCAGATTGTGTCTTGTCTTAGGAACTAAGTATAATTAGTCTAATTCTCAATTTTAG
TTTTACTAACTACTAACTAGTCTGATTATCATATCTCTGTGTATGCAGTGTGACCCAGAG
GAGGCGGGTTCATGCGACTCTGGTTGCAATGGTGGCCTCATGAACAGCGCTTTTGAATAC
ACCCTCAAAACCGGAGGTCTCATGAGAGAAGAAGACTATCCTTACACCGGCAAGGACGGC
CCCGTCTGCAAGTTAGACAAGTCCAAGATCGTTGCCTCTGTCTCCAACTTCAGTGTCATC
TCCATCGACGAAGACCAGATTGCTGCCAACCTTGTTAAAAACGGACCTCTTGCAGTAGCC
ATCAACGCCGCCTATATGCAGACTTACATTGGCGGAGTATCCTGCCCTTACATTTGCACC
AGGAGGCTCAACCACGGTGTCTTATTGGTGGGTTATGGGTCCGCTGGTTACGCTCCTGCT
AGGTTCAAGGAGAAGCCTTACTGGATCATCAAGAACTCGTGGGGAGAGACTTGGGGCGAG
AATGGTTTCTACAAGATCTGCAAAGGCCGTAACATTTGTGGCGTTGATAGTCTTGTCTCC
ACCGTTACAGCCGCTGTGTCTACCACCGCTCATTAATTTAAGCCAAGAGGCTTCGTTAAA
TAAATTAATTCACTCTGGTGATTTGTGTGAGCGAGCACTCTTTGCATTGACTCTTTATTT
CTCTCTGCTTTTTTTTAAAGAAAGATGAAGTTTGTAAATAAATTGCATCCTTTTTTAAGC
AAATCCATATCATGACAATCACGGTTGAGTTGAAATATTGAAGATAAGACGACGCACAAC
GTTCTTATATGAGCCTGCCTGGTAAGAATTTGAACCAAGTATGAGCTGGTCACTTATGTT
GTCCTCAGCTATATAGCAAGAATGTACAATGAAATTGCGTAAAAGCCCAATTTAACTTGT
GAAAGACAGCTTTGGTTAAAAATAATTTTAATTCTTTACCCAGTCCATTAGAAAAATAAT
GTAGTTCAATAGGCCTACACTTAATTTCAACTTTTGGGACCCCACCCAACTATCAGTTCC
AAGTTCCACAACACTTGATAATCTGCCGCTAAGCTACTAAAACCACATCCGATCCTTGAT
ATGTAATAATCATAGATTCATAGCAACATATAATCATCAGAACCACCAAATATCGAAGAT
AGATGAAAGCTTCATCAAAACTTACGTTCTGGATGAATGCATATGAAGCAAACAAGCAAA
ATCGAGCATAAAATTATTACTTATTAATAAAACAAAGGTCCCAAATCCTCACATTATTTG
TCATACCCACAGCTCATTATTATTTTTATTTAATTCCAAACAAACACAAACACAACAACA
AATGGGTTTTGTCTCAAACAAATCCCATTATCCCCCTCTCTTTTTTTGTCTGTAAAAAAT
CTGATCTCCACACAGGCAAATAAATAAAGATATAGAGAGAAGGGGAAAATAAATAAATAG
AACTTGGGTCTAGCTGGGCCTCTTTTATATATGCAAATGGCAGAGAGGATGAGATGGGAA
TGAATCATCATCATCCATTCATATCACTCGTCCTCGTTTGCGGTAAGAATGAAAGAGAAA
GGAGCGAACTTGTAACCATCTCCTTCGTAGAATTTGTTCTGAAACTCTACCCAGTGTAGA
CGCAGTGCGTGAAGGAACGCACTCAGTGTCTCCATCACCAGCAGCACTCCCACCGTGGCG
AATATGAACACGATTATCCC
Pro Sequence
MDLLKLSFSLLLLSFLLVSVSSSSDGDDAVIRQVVDGAAEPNVLSSEDHF
SLFKSKFGKVYASGEEHDYRFSVFKANLRRARRHQKMDPSARHGVTQFSD
LTRSEFREKHLGVKGGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVK
NQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEAGS
CDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDGPVCKLDKSKIVASV
SNFSVISIDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYICTRRLN
HGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICG
VDSLVSTVTAAVSTTAH
mRNA Sequence
TAAATATCTTCCGATTTTTCCGACAAAACTAAAACAATATCTAAAAAGCTTTATATTACATACATACAAT
CACTTGTTGCGTGTGAAAGAGATAGATTCTTCCCCAGCCCTTTTAACTTTGCCTTTAGGGTTCATCTTCT
TCTATATTTAATCCCTTCCTCCCTCATTTCATTCAATCTCAAATCACAATGGATCTTCTTAAGCTTTCCT
TCTCCCTTCTCCTCCTTTCCTTCCTCCTCGTCTCCGTCTCCTCATCGTCCGACGGCGACGATGCCGTGAT
CCGGCAGGTGGTTGATGGAGCCGCCGAGCCAAATGTTTTATCCTCGGAAGATCACTTTTCTCTGTTCAAG
AGCAAGTTCGGAAAGGTCTACGCTTCCGGGGAGGAGCATGATTACAGATTCTCCGTCTTCAAAGCCAATC
TGAGGCGAGCGAGGCGCCACCAGAAGATGGATCCCTCTGCGCGTCACGGCGTTACTCAGTTCTCGGATCT
GACTCGGTCTGAGTTCAGGGAGAAGCATCTCGGAGTCAAAGGAGGGTTTAAGCTTCCTAAAGACGCCAAC
AAAGCTCCGATTCTCCCAACCGAGAATCTCCCTGAGGATTTTGATTGGAGAGATCACGGAGCCGTCACCC
CCGTCAAAAATCAGGGATCATGCGGCTCTTGCTGGAGTTTCAGCGCCACCGGAGCTCTTGAAGGTGCTAA
CTTCCTCGCCACCGGCAAACTCGTCAGCCTTAGCGAACAACAGCTCGTCGACTGTGATCATGAGTGTGAC
CCAGAGGAGGCGGGTTCATGCGACTCTGGTTGCAATGGTGGCCTCATGAACAGCGCTTTTGAATACACCC
TCAAAACCGGAGGTCTCATGAGAGAAGAAGACTATCCTTACACCGGCAAGGACGGCCCCGTCTGCAAGTT
AGACAAGTCCAAGATCGTTGCCTCTGTCTCCAACTTCAGTGTCATCTCCATCGACGAAGACCAGATTGCT
GCCAACCTTGTTAAAAACGGACCTCTTGCAGTAGCCATCAACGCCGCCTATATGCAGACTTACATTGGCG
GAGTATCCTGCCCTTACATTTGCACCAGGAGGCTCAACCACGGTGTCTTATTGGTGGGTTATGGGTCCGC
TGGTTACGCTCCTGCTAGGTTCAAGGAGAAGCCTTACTGGATCATCAAGAACTCGTGGGGAGAGACTTGG
GGCGAGAATGGTTTCTACAAGATCTGCAAAGGCCGTAACATTTGTGGCGTTGATAGTCTTGTCTCCACCG
TTACAGCCGCTGTGTCTACCACCGCTCATTAATTTAAGCCAAGAGGCTTCGTTAAATAAATTAATTCACT
CTGGTGATTTGTGTGAGCGAGCACTCTTTGCATTGACTCTTTATTTCTCTCTGCTTTTTTTTAAAGAAAG
ATGAAGTTTGTAAATAAATTGCATCCTTTTTTAAGCAAATCCATATCATGACAATCACGGTTGAGTTGAA
ATATTGAAGATAAGACGACGCACAACGTTCTTATATGAGCCTGC