SEARCH

DETAIL

Detail for ZS11_A04G01940.t1

Genome:
ZS11: ZS11_A04G01940.t1
ZS11_v0: BnaA04T0016900ZS
WE: WE_A04G01870.t1
WE_v0: BnaA04T0015900WE
Darmor: A04p01720.1_BnaDAR
BH: BnaA04T015900BH
Quinta: BnaA04T0008600QU
ZS2: BnaC04T270300ZS2
SW: BnaA04T019900SW
Express61: A04p001540.1_BnaEXP
Xiaoyun: BnaA04G0017300XY
P202: BnaA05G004780P202.1
BL: BnaA04T015900BH
TA: BnaA04T018000TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g35530D
RB: BnaA04T019700RB
No2127: BnaC04T0266300NO
P130: BnaA04G001630P130.1
Length: 357
KOG ID: KOG0143
KOG E-value: Not available
KOG Score: 596.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism; General function prediction only
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013742056.1
NR E-value: 8.100000e-210
NR Score: 734.6
NR Annotation: XP_013742056.1 flavanone 3-dioxygenase 3 [Brassica napus]
SwissProt Protein: Q7XR84|FL3H3_ORYSJ
SwissProt E-value: 1.030000e-91
SwissProt Score: 280.0
SwissProt Annotation: Flavanone 3-dioxygenase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=F3H-3 PE=1 SV=1
CDS Sequence (1089 bp)
ATGGAGGAAACAAATAAAAATGTGCTTGGTGATTGCTTTACTAGTGCTATGGCACTCACTGAGTCAGGTG
TCCCTCACGTGCCTACCCGTTACATTCTTCCGCCTTCACAACGACCAGTTCTCAGTCCAAGCATTGGCAC
TGGTAGCATCAATCTTCCTGTCATTGATCTCTCCTTCTTACATGATCCTCTGCTTCGACCCAGTGTCATC
CATGAGATTGAAATGGCTTGCAAGGAGTTTGGTTTCTTTCAGGTTACAAACCATGGAATATCATCTCCAG
TGGTGAAAGATGCACTTCATGCAGCTACAAGGTTCTTTGACTTACCAGCCGATGAGAAGATGCTTCTGGT
TTCCGATGATGTTCACACGCCAGTAAGATATGGCACCAGCATAAACCATTCAACAGACAGTGTTCATTAC
TGGAGAGACTTCATCAAACATTACTCCCATCCTCTCTCAAAGTGGATTGATCTCTGGCCATCCAACCCTC
CATGCTACAAGGAAAAAGTGGGGAGATACGCAGAAGCAACGCATGTGCTACACAAGCAACTAATGGAAGC
TATCTCAGAAAGTCTAGGCCTCGAGAAAAGTTACTTACAGGAAGAGATCGAAGAAGGGTCACAAGTCATG
GCCGTGAACTGCTACCCAGCGTGTCCAGAACCCGAGATAGCCTTGGGAATGCCACCACACTCTGACTTTA
GCTCACTGACCATCTTACTCCAAAGCAGCCAGGGGCTTCAGATAAAAGACAAAAACAACAACTGGGTCTG
CGTGCCGTACATAGAAGGAGCTCTGATAGTGCAGCTTGGAGATCAAGTAGAAGTGATGAGCAATGGCGTA
TACAAGAGCGTGGTTCATCGAGTAACAGTGAACAAAGATGTCAACCGCCTCTCTTTCGCGAGCCTTCACA
GCTTGCCAATGAACAAGAAGATAAGTCCAGCACCTCAGCTCGTGAATGAAGATAAACCAGCTGCTTATGG
AGATTTCAGCTTTAACGATTTTCTTGAGTATATCTCAAGAAACGATCTCACAAAGCAGAGATTCATTGAT
ACAGTCAAGAAGAACAAGTTCTGA
Upstream Sequence
ATGGAGGAAACAAATAAAAATGTGCTTGGTGATTGCTTTACTAGTGCTATGGCACTCACTGAGTCAGGTG
TCCCTCACGTGCCTACCCGTTACATTCTTCCGCCTTCACAACGACCAGTTCTCAGTCCAAGCATTGGCAC
TGGTAGCATCAATCTTCCTGTCATTGATCTCTCCTTCTTACATGATCCTCTGCTTCGACCCAGTGTCATC
CATGAGATTGAAATGGCTTGCAAGGAGTTTGGTTTCTTTCAGGTTACAAACCATGGAATATCATCTCCAG
TGGTGAAAGATGCACTTCATGCAGCTACAAGGTTCTTTGACTTACCAGCCGATGAGAAGATGCTTCTGGT
TTCCGATGATGTTCACACGCCAGTAAGATATGGCACCAGCATAAACCATTCAACAGACAGTGTTCATTAC
TGGAGAGACTTCATCAAACATTACTCCCATCCTCTCTCAAAGTGGATTGATCTCTGGCCATCCAACCCTC
CATGCTACAAGGAAAAAGTGGGGAGATACGCAGAAGCAACGCATGTGCTACACAAGCAACTAATGGAAGC
TATCTCAGAAAGTCTAGGCCTCGAGAAAAGTTACTTACAGGAAGAGATCGAAGAAGGGTCACAAGTCATG
GCCGTGAACTGCTACCCAGCGTGTCCAGAACCCGAGATAGCCTTGGGAATGCCACCACACTCTGACTTTA
GCTCACTGACCATCTTACTCCAAAGCAGCCAGGGGCTTCAGATAAAAGACAAAAACAACAACTGGGTCTG
CGTGCCGTACATAGAAGGAGCTCTGATAGTGCAGCTTGGAGATCAAGTAGAAGTGATGAGCAATGGCGTA
TACAAGAGCGTGGTTCATCGAGTAACAGTGAACAAAGATGTCAACCGCCTCTCTTTCGCGAGCCTTCACA
GCTTGCCAATGAACAAGAAGATAAGTCCAGCACCTCAGCTCGTGAATGAAGATAAACCAGCTGCTTATGG
AGATTTCAGCTTTAACGATTTTCTTGAGTATATCTCAAGAAACGATCTCACAAAGCAGAGATTCATTGAT
ACAGTCAAGAAGAACAAGTTCTGA
Downstream Sequence
GGTAATATTCTTGTTTTCAGCTATATAAACTACACATGTATGGTTAGGTAAGACACGTGA
CAAGTTATGTAACTTAGATTCATGAACAATTACAATCCAAAAGTGTTATATTCATTAGAT
TTAGGCCATGTGTTGTATAGAGAGACTTATGAGTTCAGTTTTTTTGGTTTGTATTTCCAC
CAATCAACTAAGTCCTTATCAAAAAGATTTAAATGAAAAAGACAGTCCTTAGTTTCTGTT
TTTATTGAGGATAAAAGTAAGTAGCCATGTGGACATGCTTATCTTTTTCTTTATTCTAAT
GTCATGTATGCTGCTCTGTTTCATTAAAACACACTACACTAATATCATTTCCATCCCTCT
TATTCAAGTACATAACTCTGATCCAAAACTTGCTAACTCAACAGGTTACAAACCATGGAA
TATCATCTCCAGTGGTGAAAGATGCACTTCATGCAGCTACAAGGTTCTTTGACTTACCAG
CCGATGAGAAGATGCTTCTGGTTTCCGATGATGTTCACACGCCAGTAAGATATGGCACCA
GCATAAACCATTCAACAGACAGTGTTCATTACTGGAGAGACTTCATCAAACATTACTCCC
ATCCTCTCTCAAAGTGGATTGATCTCTGGCCATCCAACCCTCCATGCTACAAGTAAGTAA
AACCTATCTAGGCCAACTTCACTATATGAATATCAAACAAAACTTGTTCACATTTTATGG
GTAGATCTGGCGGACCAGATGCCCTTCTTTGGACCAAATGCTCTACTAGATTCATTACCA
GATGTCCAGCCCCTCGCTTAGTATGACATTGTCCGTTTTGGGAATAAGCCCCACAAATAT
TTTTTTTGGGGGAAGGCTTCTCCTCAAAGTGACGGACATTTGGCTGTAGTGGAGAGTCTG
GTCCGTCACAACAGTAGAAATATCCTATTGCTCCGTAGATATTTCACAACTTGTAGTACT
ATCTAGGACTCAAAACTGATGTGATCTATCCTCTTACTATCAGGGAAAAAGTGGGGAGAT
ACGCAGAAGCAACGCATGTGCTACACAAGCAACTAATGGAAGCTATCTCAGAAAGTCTAG
GCCTCGAGAAAAGTTACTTACAGGAAGAGATCGAAGAAGGGTCACAAGTCATGGCCGTGA
ACTGCTACCCAGCGTGTCCAGAACCCGAGATAGCCTTGGGAATGCCACCACACTCTGACT
TTAGCTCACTGACCATCTTACTCCAAAGCAGCCAGGGGCTTCAGATAAAAGACAAAAACA
ACAACTGGGTCTGCGTGCCGTACATAGAAGGAGCTCTGATAGTGCAGCTTGGAGATCAAG
TAGAAGTGATGAGCAATGGCGTATACAAGAGCGTGGTTCATCGAGTAACAGTGAACAAAG
ATGTCAACCGCCTCTCTTTCGCGAGCCTTCACAGCTTGCCAATGAACAAGAAGATAAGTC
CAGCACCTCAGCTCGTGAATGAAGATAAACCAGCTGCTTATGGAGATTTCAGCTTTAACG
ATTTTCTTGAGTATATCTCAAGAAACGATCTCACAAAGCAGAGATTCATTGATACAGTCA
AGAAGAACAAGTTCTGAAGATAGGTGTTGTGTTGGATTACGTGGAACCTAAGTAAGTTGC
CAAAAATGTATTAATTAGTATATGTATTGTTATGAAACCACTAGAATTATTACAGAAGAG
ATTGTATGCAAGTGAAATGTACTCTGTCTATATGTTACATAATAAGCATAATTACTTGTC
ATAATTGCAAATGATGTTTCTTGTTTCTCTTGATAAAGACGAGATAAATCGTACAAAAAT
CTATAAAATTCATTGATACAGTCAAGAAGAAGAACAGTGTGTGAAGATGGTGATAATTCA
CAACAAAGAAGGTGAATTTGCAGCACCGTATCGAACTACTTACAGTCTACGGTAAATCAG
CGGTGATAATAGTTTTCTCCCGCAAGCTCTGTTAATACGGCTCCGCCTTATCTTCTCGGT
TCGGTCGGTTGATTCGCCGT
Pro Sequence
MEETNKNVLGDCFTSAMALTESGVPHVPTRYILPPSQRPVLSPSIGTGSI
NLPVIDLSFLHDPLLRPSVIHEIEMACKEFGFFQVTNHGISSPVVKDALH
AATRFFDLPADEKMLLVSDDVHTPVRYGTSINHSTDSVHYWRDFIKHYSH
PLSKWIDLWPSNPPCYKEKVGRYAEATHVLHKQLMEAISESLGLEKSYLQ
EEIEEGSQVMAVNCYPACPEPEIALGMPPHSDFSSLTILLQSSQGLQIKD
KNNNWVCVPYIEGALIVQLGDQVEVMSNGVYKSVVHRVTVNKDVNRLSFA
SLHSLPMNKKISPAPQLVNEDKPAAYGDFSFNDFLEYISRNDLTKQRFID
TVKKNKF
mRNA Sequence
ATGGAGGAAACAAATAAAAATGTGCTTGGTGATTGCTTTACTAGTGCTATGGCACTCACTGAGTCAGGTG
TCCCTCACGTGCCTACCCGTTACATTCTTCCGCCTTCACAACGACCAGTTCTCAGTCCAAGCATTGGCAC
TGGTAGCATCAATCTTCCTGTCATTGATCTCTCCTTCTTACATGATCCTCTGCTTCGACCCAGTGTCATC
CATGAGATTGAAATGGCTTGCAAGGAGTTTGGTTTCTTTCAGGTTACAAACCATGGAATATCATCTCCAG
TGGTGAAAGATGCACTTCATGCAGCTACAAGGTTCTTTGACTTACCAGCCGATGAGAAGATGCTTCTGGT
TTCCGATGATGTTCACACGCCAGTAAGATATGGCACCAGCATAAACCATTCAACAGACAGTGTTCATTAC
TGGAGAGACTTCATCAAACATTACTCCCATCCTCTCTCAAAGTGGATTGATCTCTGGCCATCCAACCCTC
CATGCTACAAGGAAAAAGTGGGGAGATACGCAGAAGCAACGCATGTGCTACACAAGCAACTAATGGAAGC
TATCTCAGAAAGTCTAGGCCTCGAGAAAAGTTACTTACAGGAAGAGATCGAAGAAGGGTCACAAGTCATG
GCCGTGAACTGCTACCCAGCGTGTCCAGAACCCGAGATAGCCTTGGGAATGCCACCACACTCTGACTTTA
GCTCACTGACCATCTTACTCCAAAGCAGCCAGGGGCTTCAGATAAAAGACAAAAACAACAACTGGGTCTG
CGTGCCGTACATAGAAGGAGCTCTGATAGTGCAGCTTGGAGATCAAGTAGAAGTGATGAGCAATGGCGTA
TACAAGAGCGTGGTTCATCGAGTAACAGTGAACAAAGATGTCAACCGCCTCTCTTTCGCGAGCCTTCACA
GCTTGCCAATGAACAAGAAGATAAGTCCAGCACCTCAGCTCGTGAATGAAGATAAACCAGCTGCTTATGG
AGATTTCAGCTTTAACGATTTTCTTGAGTATATCTCAAGAAACGATCTCACAAAGCAGAGATTCATTGAT
ACAGTCAAGAAGAACAAGTTCTGA