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Detail for ZS11_A04G10410.t1

Genome:
ZS11: ZS11_A04G10410.t1
ZS11_v0: BnaC01T0319300ZS
WE: WE_A04G10280.t1
WE_v0: Bnascaffold2480T0000300WE
Darmor: A04p09370.1_BnaDAR
BH: Bnascaffold0318T000500BH
Quinta: BnaC01T0217100QU
ZS2: BnaA04T084600ZS2
SW: BnaA04T089700SW
Express61: C06p015450.1_BnaEXP
Xiaoyun: BnaC01G0350300XY
P202: BnaC09G073720P202.1
BL: Bnascaffold0318T000500BH
TA: BnaA04T084100TA
Da-Ae: Not available
RB: Not available
No2127: BnaC01T0197100NO
P130: BnaC06G027010P130.1
Length: 200
KOG ID: KOG4668
KOG E-value: 5.910000e-117
KOG Score: 342.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03879 ND2; NADH-ubiquinone oxidoreductase chain 2 [EC:7.1.1.2]
NR Protein: YP_009228106.1
NR E-value: 9.100000e-102
NR Score: 374.8
NR Annotation: YP_009228106.1 NADH dehydrogenase subunit 2 (mitochondrion) [Brassica nigra]
SwissProt Protein: O05000|NU2M_ARATH
SwissProt E-value: 2.190000e-105
SwissProt Score: 314.0
SwissProt Annotation: NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE=2 SV=2
CDS Sequence (611 bp)
ATGTGGGCACCAGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAA
TCTCTATTTCTGCTAATATTTTACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTT
CTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGA
CCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAG
GAATTCAATCACTACTAATTGGTATCTTTATTTATGCATTAATGACGATGGATGCATTCGCCATAGTTTC
AGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCG
GCTATTACCTTCTCCATTACTATCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCC
TAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCA
GTTTGGAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG
Upstream Sequence
ATGTGGGCACCAGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAA
TCTCTATTTCTGCTAATATTTTACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTT
CTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGA
CCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAG
GAATTCAATCACTACTAATTGGTATCTTTATTTATGCATTAATGACGATGGATGCATTCGCCATAGTTTC
AGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCG
GCTATTACCTTCTCCATTACTATCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCC
TAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCA
GTTTGGAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG
Downstream Sequence
GTTCTCATACGCAGGAATACCCCCCGTTAGCCGGCTTTTGTAGCAAATTCTATTTGTTCT
TCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCCCCAGTGGGAGTAGTGACTAGCGTTA
TAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCAGTTTGGAGGACCGAAGGCAG
TTCTCCGTGCACCGGACACGTAGCTTACCGAATCAGTTGCGACACCGATGGGAATGCATG
CTACGAAAGATAGGGTCGAGTCTGATACATCAACCGTCTACTCAATATCCTTAGTAGAGT
CCACAATCACTACACGAGATGAACCTTGGTTTGGTGAATTGAAGTTCGCCTTAGGTGTAA
TAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGTGCTCCCCGCCGGTTGTTGGAA
CGACGCGAGCCGGGACGGGCCTGGATTCAGAAAGATGAAGGGCCCCAAAGTATAAATAGG
GGGTTACAAATTCCCCATCTCATTGGGGGCGGAAAACGAATCGACATCTCGATGTGATAC
AGCCTTTTCTTTTTTAGTTGGGAAAGAACGGCGAAGTCCATCCGAACCGAACCGTCCAAT
GAAGAATAAGAGGAGAGCAAAGCGCCAATGGCGCGCGAAGCGCATGCGGAGCAGGCACGG
AGAAAAATCAGTGTGGAGGAGAAGCAGCCGAGCTCATTCCCTTCGCATCCTGGGCCCAAA
GCAGTGCAGTCTTTCCTGGCCAAATCAAGGATTTGGGGCTTCTTGCTACGCTACTTAACT
ATATAAATCCTTTAGTAATATATAAATGGAAAGATAGATCCATCCATCTATCCTATCCGA
TTTCCATTTTGATATCTAAAAAAGAATCGATTTCATTCAACGTTTGATTCAAAGAACTGC
GCTTAGCCCCCCCCCCCGCTCATGAAACGGCTCTGCTGCAATGGATGGCAGAGGGTCCGT
AGTACCCAAAGCACTGGAGTTATCCAGTATAGGGAAGGGGCCTAGAAGTGCCTACTACTA
CACCATACTACACTTGGCTCTACACATTTACCGAGCTAACCCCTGTCCAGTGCCTGGCAG
AGCTAAGGGGCTTCAATCCTTATTCCTTATCCCCATCTTCGCCCAGGCTAACGGGGCCTT
ACTTATTCAGGGGGGGAGCCCCGAGAAGCACTGTTGAGAAGAAGATCCTAGGCCCCTCTT
CATTCTCTACAGGGTTTCTTTCTTCAATATATATATAGGTGACAACGAGCGAGGCAGAGA
TGGAAGAGATCAAAGACGAGAATAAGAAGCCAGTAAACTTCTTCCTTTTTGATCATTTTG
TTTGATAGAGGGGGATAGAAAAAATGGACAAAACTGACTCGCATTTCTCATCGAACAAAT
ACGAAAAAAGAATCATATTGAAAACTGAAACCTCACCTCTCCTCTCGTTTCACTCTCGAG
GAACGCCTTACAGTCGAGCTCCTTTGTCACTCCGTGCCTCTCTAGACAAGTGCTCGAGTC
ATGACTCCGAGGAACGCCTTTTCAGTCGAGTTGCTAAAGCACCTCTCGCTACGCTCGAGA
TCTTTGAACCTTTCAGTCGAGATCTTTGAACCTTTTAGTCGAGTGCCTTCGGCCCTCTCC
CACCAAGGATAAGGTCTCATTAATTAGTTGATGAGGGGTCGAGTTACTGCGTTCCTAACC
CAACTCCCTCCTTCTCCGAGCTTTGTATTATAAGTGATCCGAACCTGCCCGGAGTGAGCC
TCCCATAGAGGCAAGTTGGTGAGCCGTATGATGGGCAACTATCTCCTGCGGTTTGGAGAG
GACTCAGCTGTTAGTTAGTATCCCCTTGGTTTCGGGGTGGACCCTTTCACTCTATTTTAT
TATATACGCTTAGTGAAAAGAATGTTTTTTGATACACCTAGGACATGGATTCTATATGAA
CCAATGGATCGTAATAAGTCGTTACTACTAGCAATGACTTCCTTTTTCATTACTTCATCC
TTGCTATACCCCTCTCCTTT
Pro Sequence
MWAPDIYEGSPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFC
SIASMILGALAAMAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLI
GIFIYALMTMDAFAIVSALRQTRVKYIADLGALAKTNPISAITFSITIKF
YLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRISQFGGPKAVLRAPDT
mRNA Sequence
ATGTGGGCACCAGATATCTATGAGGGTTCACCCACCCCGGTTACAGCATTCCTTTCTATTGCGCCTAAAA
TCTCTATTTCTGCTAATATTTTACGTGTTTCTATTTATGGTTCCTATGGAGCTACATTGCAACAAATCTT
CTTTTTCTGCAGCATTGCTTCTATGATCTTAGGAGCACTGGCCGCCATGGCCCAAACGAAAGTCAAAAGA
CCTCTAGCTCATAGTTCAATTGGACATGTAGGTTATATTCGTACTGGTTTCTCATGTGGAACCATAGAAG
GAATTCAATCACTACTAATTGGTATCTTTATTTATGCATTAATGACGATGGATGCATTCGCCATAGTTTC
AGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTCTAGCCAAAACGAATCCTATTTCG
GCTATTACCTTCTCCATTACTATCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCC
TAGCCCCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCA
GTTTGGAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG