SEARCH

DETAIL

Detail for ZS11_A04G12210.t1

Genome:
ZS11: ZS11_A04G12210.t1
ZS11_v0: BnaA04T0097700ZS
WE: WE_A04G12090.t1
WE_v0: BnaA04T0089800WE
Darmor: A04p10880.1_BnaDAR
BH: BnaA06T079200BH
Quinta: BnaA04T0087200QU
ZS2: BnaC04T367800ZS2
SW: BnaA04T102100SW
Express61: A03p012970.1_BnaEXP
Xiaoyun: BnaA08G0116800XY
P202: BnaA02G008480P202.1
BL: BnaA06T079200BH
TA: BnaC04T367700TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g16770D
RB: BnaC04T398900RB
No2127: BnaA04T0045100NO
P130: BnaC04G048130P130.1
Length: 183
KOG ID: KOG3135
KOG E-value: 6.300000e-24
KOG Score: 94.7
KOG Annotation: General function prediction only
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
NR Protein: VDD11209.1
NR E-value: 4.400000e-42
NR Score: 176.4
NR Annotation: VDD11209.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: Q6NQE2|FQRL1_ARATH
SwissProt E-value: 1.380000e-23
SwissProt Score: 95.5
SwissProt Annotation: Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27270 PE=1 SV=1
CDS Sequence (559 bp)
ATGGTTGAAATAATTAGTATAATATACTTCAATGTATGTTTGTTGTGTATCGAAAGGGAAGAAAATGATA
TCTCAATTCTTGGATCATCTTGGGTTGTGGATAGCAGTCCGTTCTGTCAAAAGCTCACACTACATGGTAA
AATCTTGGCTGGAAACAAAACCAAGAAAAATCAAAACTTTTCAGAGATTCTCGAGAAGGTTGAAGGAGAA
GGACACTTATTTCCATGGCGAACAATTTATATCATGTACTACTCAATGTACATACATGTGGTGAAACTAG
CACATGGGATTAGGAACGGTGCTGCTTCGGTTGATGGTGTCGATGCCAAACTCCGGCAGGTCAGTCATGC
ACCACCAAAGAGTGATGCTCCTCTTATCACCTCCAACGACCTTGCTGAGGCTGATGGGTTTGTCTTTGGC
TTCCCAACAACCTTGTGGTCCAATCCGGCCCTGTTGGTGGCCTCTGGAGAACTCCACAACTTGCTGCATA
TGGTGAGTTGGTTTGGATCGCCTGAGCAAGATCCTGAAAGATCCAAAAAGATCAAAGTTTAA
Upstream Sequence
ATGGTTGAAATAATTAGTATAATATACTTCAATGTATGTTTGTTGTGTATCGAAAGGGAAGAAAATGATA
TCTCAATTCTTGGATCATCTTGGGTTGTGGATAGCAGTCCGTTCTGTCAAAAGCTCACACTACATGGTAA
AATCTTGGCTGGAAACAAAACCAAGAAAAATCAAAACTTTTCAGAGATTCTCGAGAAGGTTGAAGGAGAA
GGACACTTATTTCCATGGCGAACAATTTATATCATGTACTACTCAATGTACATACATGTGGTGAAACTAG
CACATGGGATTAGGAACGGTGCTGCTTCGGTTGATGGTGTCGATGCCAAACTCCGGCAGGTCAGTCATGC
ACCACCAAAGAGTGATGCTCCTCTTATCACCTCCAACGACCTTGCTGAGGCTGATGGGTTTGTCTTTGGC
TTCCCAACAACCTTGTGGTCCAATCCGGCCCTGTTGGTGGCCTCTGGAGAACTCCACAACTTGCTGCATA
TGGTGAGTTGGTTTGGATCGCCTGAGCAAGATCCTGAAAGATCCAAAAAGATCAAAGTTTAA
Downstream Sequence
TGTAAGTTCTCTCCATACACATGACATTAGATAATGTTGAGATTACAATATATGAATAGA
ATAGTCTGCCAAATATAACATGGTTTAAATTGCTATTCTTTGTCGTTGTTGCTTCGCCGT
AGCAATCTTTGGCAATCGGATAATCAGCGAAGAATCACCTTCGCGATAATACCATTACAC
ACAGTTTTCTCTATCGGAAAGATCCGTCAAGATTAAAGACGATGAAAAAGCGATGGAATA
AATTTGGAAATGAGGGGTTATGACTTTCCAATTGCCACGATTTACTTTTGTTACATAATA
ATTTATTCATTTCATTTTTTCTCTATAGGTTTTACCGGTTGCTTCAAAGGACAATATGAC
AATATTACATAAAATACATATGGCACACACAAAAAGTAGGGCAATTAGTCATAGATTGAA
TTATAATTTGTTTGATAGCTAAATGCTTTCCCTACTTATAAAGTTTTTTTTAACTAAGGC
TTTCATTCAACTTATAAAAGTAATTACAAATAGAAATATTCTTTTCGTACTCTTTTCTCA
TACCAAATAAGAATTTTTTTTCAGTTTTCATTGAGTACAATTTAACCTAATATCCAAGAT
TGACTACTCATTCATGCACCAAAGAACCGTGCGACTGTGAGAAAACCCTTTATAACAATG
TTTTTAATCCTGATAGAGATACTGAACTAAATTATTTTTCAGGGTCACCGATCGATCATA
ATCAATAGATTAATAAATGCTAATATGTAGTTATACATAAATATAATATTATTAACTATT
GGAAATAAGATAATATACAGTATTCATGTTTTATTTACAAAATATAATTCTTGGATCAGT
CTGTTCTGCCAAAAGCTCACGTTTCATGGTAAAATCATGGACTTGAATGGCTTAAAACAT
TCGAGTCCGTAGTCATTTGATTCTTCTTTTATTATTTATAACTGAATTTTAAAATCAGGA
AACCCTAATTTTGATTTCTAGGTTGTGTATCGAAAGGGAAGAAAATGATATCTCAATTCT
TGGATCATCTTGGGTTGTGGATAGCAGTCCGTTCTGTCAAAAGCTCACACTACATGGTAA
AATCTTGGCTGGAAACAAAACCAAGAAAAATCAAAACTTTTCAGAGATTCTCGAGAAGGT
TGAAGGAGAAGGACACTTATTTCCATGGCGAACAATTTATATCATGTATGTAATTAAAAC
AAACAAATCATTTTTTTTTCCGAAATGTTCTACATGTAAATACATCTTTGGTCATCAATT
AATCGACCGGTCAACTCTGATTGACTCGGTTTAGTTTCTGTGATCTGAACATGAAATTTC
CTATAGTATGATTTTTCACTGCGGATCGAAAATTTGTTTGTGGTTTAATACGTTTCTCGA
ACGATCTGTTAAATAGTTTTTATTTGTGGATTTTTTATTTAAGCTGCGTTTTAGAATACT
TAGGTATGTACACCATAAATGATATTGGCCTCTTGTAACGGATTTGGATTTCAACTGGAA
ATCCATTAATTGATTATTGACAAATGTAATGGATTGTACCAGGTACTACTCAATGTACAT
ACATGTGGTGAAACTAGCACATGGGATTAGGAACGGTGCTGCTTCGGTTGATGGTGTCGA
TGCCAAACTCCGGCAGGTCAGTCAGTGCTCTCTTTACTGACTTTTCTATGAAGCATCTCT
GACAATTCTAGGCTACAATGAGATACAAAAACTGACCATCAAATCTTTGAAACAGAATAG
GAGCTGTAGTTAGAAAGAAGTTCTTATGTCTGAATGAAAGAGGGAATACATTTCTATATA
TTCTATTACTGGTGAATATATATGCCACCATTCTTTAGGGTATGTGATAATTTTTTGAGT
GATTTAACACTTTTAATCTCACTGATGCATGTTGTCAGCTACCTTAAATTTAACTTGCAT
CCTCTGAAAGAAATACGAAGACATTCATACTGAAGCATCGAGTGAAGCGTTTTTCTCTTG
ACAGGTAGTACCAGAGACGA
Pro Sequence
MVEIISIIYFNVCLLCIEREENDISILGSSWVVDSSPFCQKLTLHGKILA
GNKTKKNQNFSEILEKVEGEGHLFPWRTIYIMYYSMYIHVVKLAHGIRNG
AASVDGVDAKLRQVSHAPPKSDAPLITSNDLAEADGFVFGFPTTLWSNPA
LLVASGELHNLLHMVSWFGSPEQDPERSKKIKV
mRNA Sequence
ATGGTTGAAATAATTAGTATAATATACTTCAATGTATGTTTGTTGTGTATCGAAAGGGAAGAAAATGATA
TCTCAATTCTTGGATCATCTTGGGTTGTGGATAGCAGTCCGTTCTGTCAAAAGCTCACACTACATGGTAA
AATCTTGGCTGGAAACAAAACCAAGAAAAATCAAAACTTTTCAGAGATTCTCGAGAAGGTTGAAGGAGAA
GGACACTTATTTCCATGGCGAACAATTTATATCATGTACTACTCAATGTACATACATGTGGTGAAACTAG
CACATGGGATTAGGAACGGTGCTGCTTCGGTTGATGGTGTCGATGCCAAACTCCGGCAGGTCAGTCATGC
ACCACCAAAGAGTGATGCTCCTCTTATCACCTCCAACGACCTTGCTGAGGCTGATGGGTTTGTCTTTGGC
TTCCCAACAACCTTGTGGTCCAATCCGGCCCTGTTGGTGGCCTCTGGAGAACTCCACAACTTGCTGCATA
TGGTGAGTTGGTTTGGATCGCCTGAGCAAGATCCTGAAAGATCCAAAAAGATCAAAGTTTAA