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DETAIL

Detail for ZS11_A04G23600.t1

Genome:
ZS11: ZS11_A04G23600.t1
ZS11_v0: BnaA04T0189800ZS
WE: WE_A04G24220.t1
WE_v0: BnaA04T0179700WE
Darmor: A04p22390.1_BnaDAR
BH: BnaA04T201800BH
Quinta: BnaA04T0186500QU
ZS2: BnaA04T194000ZS2
SW: BnaC03T279600SW
Express61: A04p018340.2_BnaEXP
Xiaoyun: BnaA04G0193400XY
P202: BnaA04G014360P202.1
BL: BnaA04T201800BH
TA: BnaA04T196500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g38270D
RB: BnaA04T206800RB
No2127: BnaC09T0462800NO.1
P130: BnaA04G019620P130.1
Length: 271
KOG ID: KOG0725
KOG E-value: 3.030000e-164
KOG Score: 457.0
KOG Annotation: General function prediction only
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity)
KEGG Ortholog: -
NR Protein: CDY31776.1
NR E-value: 2.700000e-149
NR Score: 533.1
NR Annotation: CDY31776.1 BnaA04g17120D [Brassica napus]
SwissProt Protein: A7DY56|TRN1_COCOF
SwissProt E-value: 4.450000e-167
SwissProt Score: 466.0
SwissProt Annotation: Tropinone reductase OS=Cochlearia officinalis OX=270110 GN=TR PE=1 SV=1
CDS Sequence (827 bp)
ATGACCGAGACAGGAGAAAAATCGAGAGACATATCTAGATGGAGCCTTAGAGGCATGACTGCTCTTGTCA
CCGGTGGCTCCAAAGGCCTCGGGGAGGCTGTGGTGGAAGAACTATCAATGTTGGGAGCAAGAGTCCACAC
ATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACTTGAATGGCAAGCAAAAGGGTTTCAGGTTACC
ACTTCTGTTTGCGATGTTTCTTCTCGTGTCCAACGAGAGAAACTCATGGAAACCGTTTCCACTCTCTTCC
AAGGAAAACTCAACATCCTTGTAAACAATGCGGGAACGTGTATAACAAAGCCGACCACAGAGTTTAGTGC
AGAAGACTTCTCGTTTCTGATGGCCACAAATCTCGAATCAGCTTTTCATCTCTCACAGCTAGCCCATCCT
TTTTTAAAAGCTTCTGGTTCAGGGAGCATCGTGTTCATGTCTTCCGCTGCTGGGGTTGTGCATATCAATG
TTGGATCCATCTACGGAGCTACTAAAGGAGCCATGAATCAGCTAGCAAGAAACTTAGCATGTGAGTGGGC
AAGTGACAGCATAAGGGTTAACTCTGTGTGTCCATGGTTCATAGCGACTCCTTTAGCAAACAAATATATC
GATCATGAAGAGTATAACAAAGAAGTGGAGAAGAAGACACCAATGGGACGTGTTGGAGAGGCAAATGAAG
TATCATCGCTTGTTGCGTTTCTCTGTTTTCCGGCAGCTTCGTATATAACCGGTCAGGTTATCTGCGTTGA
CGGAGGTGCCACTATCAACGGTTTATCTTTCAAGTCTTTGCCTTAA
Upstream Sequence
AAGAACTCATAACCAAAAATGACCGAGACAGGAGAAAAATCGAGAGACATATCTAGATGGAGCCTTAGAG
GCATGACTGCTCTTGTCACCGGTGGCTCCAAAGGCCTCGGGGAGGCTGTGGTGGAAGAACTATCAATGTT
GGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACTTGAATGGCAAGCA
AAAGGGTTTCAGGTTACCACTTCTGTTTGCGATGTTTCTTCTCGTGTCCAACGAGAGAAACTCATGGAAA
CCGTTTCCACTCTCTTCCAAGGAAAACTCAACATCCTTGTAAACAATGCGGGAACGTGTATAACAAAGCC
GACCACAGAGTTTAGTGCAGAAGACTTCTCGTTTCTGATGGCCACAAATCTCGAATCAGCTTTTCATCTC
TCACAGCTAGCCCATCCTTTTTTAAAAGCTTCTGGTTCAGGGAGCATCGTGTTCATGTCTTCCGCTGCTG
GGGTTGTGCATATCAATGTTGGATCCATCTACGGAGCTACTAAAGGAGCCATGAATCAGCTAGCAAGAAA
CTTAGCATGTGAGTGGGCAAGTGACAGCATAAGGGTTAACTCTGTGTGTCCATGGTTCATAGCGACTCCT
TTAGCAAACAAATATATCGATCATGAAGAGTATAACAAAGAAGTGGAGAAGAAGACACCAATGGGACGTG
TTGGAGAGGCAAATGAAGTATCATCGCTTGTTGCGTTTCTCTGTTTTCCGGCAGCTTCGTATATAACCGG
TCAGGTTATCTGCGTTGACGGAGGTGCCACTATCAACGGTTTATCTTTCAAGTCTTTGCCTTAAGAAGTC
AATATGATTGTGATGTTTTCGTTTGCTTCTATGTATCTTTGCGTTTGCTTCGTATTTTCCGAATAAAAGG
GTTGACGAAGGGAAGCCATATGTTTTCGTTGAAAGTAGTTATAGGTTTTGGCTTACAGCAAAAACCATTG
TAAGAAGATGATAATGTTCTATTTTTCAGAATTACTAGGTTCTGGTCCGCGCTATGCGCGGATAATGTTT
CAATATTTGTTTTGAAAATATA
Downstream Sequence
GTCAGTCCAAATTCCTCATACTTGATATGCTATACTAATTATTATAATTGATTTTATTTC
TCAACTCAATCATAGATCTATATATAATTATATTGATGTTTAATTAATTATGAACACTTT
TCCTCAAAAGAGAAAGGCTTAGTGATGTACAAATTAACATTGCATGTTTGCTGTGAATAG
GGAGGCTGTGGTGGAAGAACTATCAATGTTGGGAGCAAGAGTCCACACATGTGCCAGAGA
CGAAACTCAGCTTCAAGAAAGCTTACTTGAATGGCAAGCAAAAGGGTTTCAGGTTACCAC
TTCTGTTTGCGATGTTTCTTCTCGTGTCCAACGAGAGAAACTCATGGAAACCGTTTCCAC
TCTCTTCCAAGGAAAACTCAACATCCTTGTAAGTTTATGTACAAGAAAAGATCATTAGCA
AGATGATGTTGTTATCTGTTGTGTTTGATTCGTGTCTATATACATATAGGTAAACAATGC
GGGAACGTGTATAACAAAGCCGACCACAGAGTTTAGTGCAGAAGACTTCTCGTTTCTGAT
GGCCACAAATCTCGAATCAGCTTTTCATCTCTCACAGCTAGCCCATCCTTTTTTAAAAGC
TTCTGGTTCAGGGAGCATCGTGTTCATGTCTTCCGCTGCTGGGGTTGTGCATATCAATGT
TGGATCCATCTACGGAGCTACTAAAGGTATATATTTACACTCAAGCAATTATTGTTCTAA
GACTAACATATATTTGAGAATATATATGTGTTCACGCGTTGCAGGAGCCATGAATCAGCT
AGCAAGAAACTTAGCATGTGAGTGGGCAAGTGACAGCATAAGGGTTAACTCTGTGTGTCC
ATGGTTCATAGCGACTCCTTTAGCAAACAAAGTAAGGCAATAAATAGATAAAATAAAATA
TAAAGTTTTCCTTTGTGCTATGAATCTTTTTTGGAACACTCTTAATGCTATGAATAGAAT
AAGAAAATTACATCTGAAGTTTAACTTATCTCAAAATCTCATTTTAGTATATCGATCATG
AAGAGTATAACAAAGAAGTGGAGAAGAAGACACCAATGGGACGTGTTGGAGAGGCAAATG
AAGTATCATCGCTTGTTGCGTTTCTCTGTTTTCCGGCAGCTTCGTATATAACCGGTCAGG
TTATCTGCGTTGACGGAGGTGCCACTATCAACGGTTTATCTTTCAAGTCTTTGCCTTAAG
AAGTCAATATGATTGTGATGTTTTCGTTTGCTTCTATGTATCTTTGCGTTTGCTTCGTAT
TTTCCGAATAAAAGGGTTGACGAAGGGAAGCCATATGTTTTCGTTGAAAGTAGTTATAGG
TTTTGGCTTACAGCAAAAACCATTGTAAGAAGATGATAATGTTCTATTTTTCAGAATTAC
TAGGTTCTGGTCCGCGCTATGCGCGGATAATGTTTCAATATTTGTTTTGAAAATATACGC
GGATAATGTTTCAATATTTGTTTTGGAAATATAGATTATATTTTAAAATTTTGGTGTTTC
AATTGATTAGAGGTCGAAACTATTATAATTTAATATTAAAATTATTTTTAAGTTGATAAA
TGAAAAGAAAAAGTTACGAAAGAGTGATGTTTTAATTAAGAATTTTTTTAGTTTTCTACT
TTTCTTTGTTATTAGTTTCTATTTACAACAATCTTTAAAAATTGTTACGTTGTTTTCATA
TATTATGTTTTCTAAAAACATCATATTAGTAATAGTATATTTTAAAAGTATAACAGATGT
ACTGTTCCATTATTTGATTCAAAGTTGTTCATTTATATATATTGAAATAATATAAAGTTT
AAGTGTATATTTGTATGTCATATTTGCCATTTAGTGTAGCCATAGTGATTTTTATCGTTT
TATTGTTTTGGTTTATTTTTATTATGCGCTTTAAATTTTTTTTAAATATTAATATTTTCT
AATTGAGAGTTGTTAATGATAGACCATATTGATTTGAAATATTTCTATAAATACTGATTA
TATATATAATGTTTAATATT
Pro Sequence
MTETGEKSRDISRWSLRGMTALVTGGSKGLGEAVVEELSMLGARVHTCAR
DETQLQESLLEWQAKGFQVTTSVCDVSSRVQREKLMETVSTLFQGKLNIL
VNNAGTCITKPTTEFSAEDFSFLMATNLESAFHLSQLAHPFLKASGSGSI
VFMSSAAGVVHINVGSIYGATKGAMNQLARNLACEWASDSIRVNSVCPWF
IATPLANKYIDHEEYNKEVEKKTPMGRVGEANEVSSLVAFLCFPAASYIT
GQVICVDGGATINGLSFKSLP
mRNA Sequence
AAGAACTCATAACCAAAAATGACCGAGACAGGAGAAAAATCGAGAGACATATCTAGATGGAGCCTTAGAG
GCATGACTGCTCTTGTCACCGGTGGCTCCAAAGGCCTCGGGGAGGCTGTGGTGGAAGAACTATCAATGTT
GGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACTTGAATGGCAAGCA
AAAGGGTTTCAGGTTACCACTTCTGTTTGCGATGTTTCTTCTCGTGTCCAACGAGAGAAACTCATGGAAA
CCGTTTCCACTCTCTTCCAAGGAAAACTCAACATCCTTGTAAACAATGCGGGAACGTGTATAACAAAGCC
GACCACAGAGTTTAGTGCAGAAGACTTCTCGTTTCTGATGGCCACAAATCTCGAATCAGCTTTTCATCTC
TCACAGCTAGCCCATCCTTTTTTAAAAGCTTCTGGTTCAGGGAGCATCGTGTTCATGTCTTCCGCTGCTG
GGGTTGTGCATATCAATGTTGGATCCATCTACGGAGCTACTAAAGGAGCCATGAATCAGCTAGCAAGAAA
CTTAGCATGTGAGTGGGCAAGTGACAGCATAAGGGTTAACTCTGTGTGTCCATGGTTCATAGCGACTCCT
TTAGCAAACAAATATATCGATCATGAAGAGTATAACAAAGAAGTGGAGAAGAAGACACCAATGGGACGTG
TTGGAGAGGCAAATGAAGTATCATCGCTTGTTGCGTTTCTCTGTTTTCCGGCAGCTTCGTATATAACCGG
TCAGGTTATCTGCGTTGACGGAGGTGCCACTATCAACGGTTTATCTTTCAAGTCTTTGCCTTAAGAAGTC
AATATGATTGTGATGTTTTCGTTTGCTTCTATGTATCTTTGCGTTTGCTTCGTATTTTCCGAATAAAAGG
GTTGACGAAGGGAAGCCATATGTTTTCGTTGAAAGTAGTTATAGGTTTTGGCTTACAGCAAAAACCATTG
TAAGAAGATGATAATGTTCTATTTTTCAGAATTACTAGGTTCTGGTCCGCGCTATGCGCGGATAATGTTT
CAATATTTGTTTTGAAAATATA