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Detail for ZS11_A04G24160.t1

Genome:
ZS11: ZS11_A04G24160.t1
ZS11_v0: BnaA04T0194600ZS
WE: WE_A04G24810.t1
WE_v0: BnaA04T0183500WE
Darmor: A04p22980.1_BnaDAR
BH: BnaC04T178500BH
Quinta: BnaA04T0190200QU
ZS2: BnaA04T197700ZS2
SW: BnaA04T212000SW
Express61: A04p018690.1_BnaEXP
Xiaoyun: BnaA04G0197400XY
P202: BnaA04G014710P202.1
BL: BnaC04T178500BH
TA: BnaA04T200800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA05T143400RB
No2127: BnaA04T0140100NO
P130: BnaC04G019030P130.1
Length: 548
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1063.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_009141050.1
NR E-value: Not available
NR Score: 1121.7
NR Annotation: XP_009141050.1 PREDICTED: laccase-3 [Brassica rapa]
SwissProt Protein: Q56YT0|LAC3_ARATH
SwissProt E-value: Not available
SwissProt Score: 1063.0
SwissProt Annotation: Laccase-3 OS=Arabidopsis thaliana OX=3702 GN=LAC3 PE=2 SV=2
CDS Sequence (1670 bp)
ATGGAGTCTCTCCAGCGACTCTCCTTTGTATCCTTCATCGCCCTTCTTGCTTACTTTGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCAACGCTCGAGGTCAGGAACGGTGACTCTCTAGCAATC
ACCGTCATCAACAGAGCTCGTTACAACATTAGCATTCACTGGCATGGAATCAGACAGCTAAGGAATCCAT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATCGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCCGAGCCACCGTCTACGGT
GCTCTTATCATTTACCCTCGTCTCGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCAAGCACAGTTCACTGGAGCAGCAGC
TAATGTCTCTGACGCTTACACAATCAACGGCCAACCAGGAGATCTCTACCGATGTTCGCGAGCTGAAACA
GTCCGTTTTCCGATTTTCCCTGGTGAGACGGTCCAGCTCCGTGTCATCAACGCTGGACTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTCGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATCGGTCCCGGACAAACCACTAACGTCCTCCTCACCGCGAACCAGCGACCCGGC
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTCGACAACACAACCACAACTGCTA
TCTTGGAGTACGTCAATGCTCCAACTAGACGTGGTCGTGGCCGTGGTCAAATCGCCCCAGTTTTCCCGCG
AGCTCCAGTACCGCTCCAGGTCGACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCC
AACCCCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCGGCCAGCATAAACAACCAGTCCT
TCGTGCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGA
CTTCCCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGCGGGCTATGGCAGCCCGTG
AAAGGAACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACGAGTATTG
TCACGACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTCGGGAA
TTTTAACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACA
CCTCCAGGTGGTTGGGTTGCAATCCGGTTCGTCGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACA
TTGATTCACATTTGGGATGGGGTTTAGCGATGGTTTTCCTGGTGGAGAACGGAAGAGGACAGTTGCAATC
TGTGCAGGCTCCACCTTTGGATCTTCCAAGATGCTAA
Upstream Sequence
ATGGAGTCTCTCCAGCGACTCTCCTTTGTATCCTTCATCGCCCTTCTTGCTTACTTTGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCAACGCTCGAGGTCAGGAACGGTGACTCTCTAGCAATC
ACCGTCATCAACAGAGCTCGTTACAACATTAGCATTCACTGGCATGGAATCAGACAGCTAAGGAATCCAT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATCGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCCGAGCCACCGTCTACGGT
GCTCTTATCATTTACCCTCGTCTCGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCAAGCACAGTTCACTGGAGCAGCAGC
TAATGTCTCTGACGCTTACACAATCAACGGCCAACCAGGAGATCTCTACCGATGTTCGCGAGCTGAAACA
GTCCGTTTTCCGATTTTCCCTGGTGAGACGGTCCAGCTCCGTGTCATCAACGCTGGACTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTCGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATCGGTCCCGGACAAACCACTAACGTCCTCCTCACCGCGAACCAGCGACCCGGC
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTCGACAACACAACCACAACTGCTA
TCTTGGAGTACGTCAATGCTCCAACTAGACGTGGTCGTGGCCGTGGTCAAATCGCCCCAGTTTTCCCGCG
AGCTCCAGTACCGCTCCAGGTCGACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCC
AACCCCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCGGCCAGCATAAACAACCAGTCCT
TCGTGCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGA
CTTCCCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGCGGGCTATGGCAGCCCGTG
AAAGGAACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACGAGTATTG
TCACGACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTCGGGAA
TTTTAACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACA
CCTCCAGGTGGTTGGGTTGCAATCCGGTTCGTCGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACA
TTGATTCACATTTGGGATGGGGTTTAGCGATGGTTTTCCTGGTGGAGAACGGAAGAGGACAGTTGCAATC
TGTGCAGGCTCCACCTTTGGATCTTCCAAGATGCTAA
Downstream Sequence
GGTAAGCTGGCTGTTCTCGTTACATTATAGCTTCTCTTTATGTTCTTTGCATTAATGAAC
GTACTTTATACAAACTTACTTGATGTTTTTGTGTTGTGTCCGTTGTGGATGACTTTAGAT
CGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCAAAGCATCACGGTGAATGGTCA
GTTCCCTGGTCCAACGCTCGAGGTCAGGAACGGTGACTCTCTAGCAATCACCGTCATCAA
CAGAGCTCGTTACAACATTAGCATTCACTGGTAACTAAAATGATTTCATCACCGTTATCA
ACAAACATATGTTTATGTTCTGCCTGTTTTTATACTCTGTTTTTGGGACAGGCATGGAAT
CAGACAGCTAAGGAATCCATGGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCG
TCCAGGTCAAAGCTACACTTACAGATTCACAATCGAAGACCAAGAAGGTACTCTTTGGTG
GCATGCTCATAGCCGCTGGCTCCGAGCCACCGTCTACGGTGCTCTTATCATTTACCCTCG
TCTCGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTCTTCTCGGTAA
TATTTTATAACTTCTAATCATTCCATATATCATTTTTCATGATCACTAATAACATTTGTC
ATGGGAACACAGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCAAGCACAGT
TCACTGGAGCAGCAGCTAATGTCTCTGACGCTTACACAATCAACGGCCAACCAGGAGATC
TCTACCGATGTTCGCGAGCTGAAACAGTCCGTTTTCCGATTTTCCCTGGTGAGACGGTCC
AGCTCCGTGTCATCAACGCTGGACTGAACCAAGAGCTCTTCTTCTCAGTCGCCAACCATC
AGCTCACAGTTGTCGAAACCGATTCCGCCTACACAAAACCATTCACCACTAGTGTCATCA
TGATCGGTCCCGGACAAACCACTAACGTCCTCCTCACCGCGAACCAGCGACCCGGCCGCT
ACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTCGACAACACAACCACAA
CTGCTATCTTGGAGTACGTCAATGCTCCAACTAGACGTGGTCGTGGCCGTGGTCAAATCG
CCCCAGTTTTCCCGGTTCTTCCGGGGTTCAACGACACCGCAACCGCAACCGCTTTCACAA
ACCGTCTGCGGTATGGAAGCGAGCTCCAGTACCGCTCCAGGTCGACGAGAACCTCTTTTT
CACCGTTGGTTTGGGGCTAACCAACTGCTCCAACCCCAACAGTCCGCGTTGCCAGGGTCC
AAACGGGACCCGGTTCGCGGCCAGCATAAACAACCAGTCCTTCGTGCTACCACGAAGAAA
CTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGACTTCCCACC
TGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGCGGGCTATGGCAGCCCGT
GAAAGGAACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGA
CACGAGTATTGTCACGACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGT
TGTCGGGTCTGGTTTCGGGAATTTTAACCCGAGAACTGACCCGGCTCGGTTTAACCTATA
TGACCCACCGGAGAGGAACACCGTTGGTACACCTCCAGGTGGTTGGGTTGCAATCCGGTT
CGTCGCTGATAATCCAGGTAATTAATTTACTTAAATTATGAATTAAGCGAGTTAGCCTCA
ACCTTTAAACCATATAACTTTGTTCTAATAACGCAGGAGCATGGTTTATGCATTGTCACA
TTGATTCACATTTGGGATGGGGTTTAGCGATGGTTTTCCTGGTGGAGAACGGAAGAGGAC
AGTTGCAATCTGTGCAGGCTCCACCTTTGGATCTTCCAAGATGCTAATATAGATCTCTAA
GGATTTGTGGGGGGTTTTGT
Pro Sequence
MESLQRLSFVSFIALLAYFAFLASAELHVREFVIEPKPVKRLCRTHQSIT
VNGQFPGPTLEVRNGDSLAITVINRARYNISIHWHGIRQLRNPWADGPEY
ITQCPIRPGQSYTYRFTIEDQEGTLWWHAHSRWLRATVYGALIIYPRLGS
PYPFSMPKRDIPILLGEWWDRNPMDVLRQAQFTGAAANVSDAYTINGQPG
DLYRCSRAETVRFPIFPGETVQLRVINAGLNQELFFSVANHQLTVVETDS
AYTKPFTTSVIMIGPGQTTNVLLTANQRPGRYYMAARAYNSANAPFDNTT
TTAILEYVNAPTRRGRGRGQIAPVFPRAPVPLQVDENLFFTVGLGLTNCS
NPNSPRCQGPNGTRFAASINNQSFVLPRRNSIMQAYYQGMPGIFTTDFPP
VPPVQFDYTGNVSRGLWQPVKGTKAYKLKYRANVQIVLQDTSIVTTENHP
MHLHGYQFYVVGSGFGNFNPRTDPARFNLYDPPERNTVGTPPGGWVAIRF
VADNPGAWFMHCHIDSHLGWGLAMVFLVENGRGQLQSVQAPPLDLPRC
mRNA Sequence
ATGGAGTCTCTCCAGCGACTCTCCTTTGTATCCTTCATCGCCCTTCTTGCTTACTTTGCTTTTCTCGCTT
CAGCTGAACTTCACGTCCGTGAATTTGTGATCGAGCCAAAACCAGTGAAGAGGCTGTGCAGAACTCACCA
AAGCATCACGGTGAATGGTCAGTTCCCTGGTCCAACGCTCGAGGTCAGGAACGGTGACTCTCTAGCAATC
ACCGTCATCAACAGAGCTCGTTACAACATTAGCATTCACTGGCATGGAATCAGACAGCTAAGGAATCCAT
GGGCTGATGGTCCAGAGTACATAACACAGTGTCCGATCCGTCCAGGTCAAAGCTACACTTACAGATTCAC
AATCGAAGACCAAGAAGGTACTCTTTGGTGGCATGCTCATAGCCGCTGGCTCCGAGCCACCGTCTACGGT
GCTCTTATCATTTACCCTCGTCTCGGTTCTCCTTATCCCTTCTCTATGCCTAAACGTGACATACCAATTC
TTCTCGGGGAATGGTGGGATAGAAACCCAATGGACGTTTTGAGGCAAGCACAGTTCACTGGAGCAGCAGC
TAATGTCTCTGACGCTTACACAATCAACGGCCAACCAGGAGATCTCTACCGATGTTCGCGAGCTGAAACA
GTCCGTTTTCCGATTTTCCCTGGTGAGACGGTCCAGCTCCGTGTCATCAACGCTGGACTGAACCAAGAGC
TCTTCTTCTCAGTCGCCAACCATCAGCTCACAGTTGTCGAAACCGATTCCGCCTACACAAAACCATTCAC
CACTAGTGTCATCATGATCGGTCCCGGACAAACCACTAACGTCCTCCTCACCGCGAACCAGCGACCCGGC
CGCTACTACATGGCAGCTCGTGCCTACAACAGCGCAAACGCCCCTTTCGACAACACAACCACAACTGCTA
TCTTGGAGTACGTCAATGCTCCAACTAGACGTGGTCGTGGCCGTGGTCAAATCGCCCCAGTTTTCCCGCG
AGCTCCAGTACCGCTCCAGGTCGACGAGAACCTCTTTTTCACCGTTGGTTTGGGGCTAACCAACTGCTCC
AACCCCAACAGTCCGCGTTGCCAGGGTCCAAACGGGACCCGGTTCGCGGCCAGCATAAACAACCAGTCCT
TCGTGCTACCACGAAGAAACTCCATCATGCAAGCTTATTACCAAGGCATGCCTGGTATCTTCACGACGGA
CTTCCCACCTGTTCCACCAGTCCAGTTCGATTACACCGGTAACGTTAGCCGCGGGCTATGGCAGCCCGTG
AAAGGAACCAAAGCTTACAAGCTTAAGTACAGAGCTAATGTTCAGATTGTTTTACAAGACACGAGTATTG
TCACGACTGAGAATCATCCCATGCATCTTCACGGGTACCAATTCTACGTTGTCGGGTCTGGTTTCGGGAA
TTTTAACCCGAGAACTGACCCGGCTCGGTTTAACCTATATGACCCACCGGAGAGGAACACCGTTGGTACA
CCTCCAGGTGGTTGGGTTGCAATCCGGTTCGTCGCTGATAATCCAGGAGCATGGTTTATGCATTGTCACA
TTGATTCACATTTGGGATGGGGTTTAGCGATGGTTTTCCTGGTGGAGAACGGAAGAGGACAGTTGCAATC
TGTGCAGGCTCCACCTTTGGATCTTCCAAGATGCTAA