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Detail for ZS11_A04G24820.t1

Genome:
ZS11: ZS11_A04G24820.t1
ZS11_v0: BnaA04T0199800ZS
WE: WE_A04G25490.t1
WE_v0: BnaA04T0189000WE
Darmor: A04p23610.1_BnaDAR
BH: BnaA04T210800BH
Quinta: BnaA04T0195600QU
ZS2: BnaC04T489200ZS2
SW: BnaA04T217100SW
Express61: A04p019180.1_BnaEXP
Xiaoyun: BnaA04G0202900XY
P202: BnaA04G015050P202.1
BL: BnaA04T210800BH
TA: BnaA04T206800TA
Da-Ae: Not available
RB: BnaA04T217000RB
No2127: BnaA04T0145300NO
P130: BnaA04G020490P130.1
Length: 310
KOG ID: KOG1270
KOG E-value: Not available
KOG Score: 523.0
KOG Annotation: Coenzyme transport and metabolism
Biological Process: GO:0006744(ubiquinone biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008425(2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity)
KEGG Ortholog: K00591 COQ3; polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase [EC:2.1.1.114 2.1.1.64]
NR Protein: XP_013643550.1
NR E-value: 1.300000e-174
NR Score: 617.5
NR Annotation: XP_013643550.1 ubiquinone biosynthesis O-methyltransferase, mitochondrial [Brassica napus]
SwissProt Protein: O49354|COQ3_ARATH
SwissProt E-value: Not available
SwissProt Score: 523.0
SwissProt Annotation: Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COQ3 PE=1 SV=2
CDS Sequence (946 bp)
ATGAATCAAATGCAAAGGATTCTCTCTGCTCGTCGACTATCTCACTCGCTCATACCTCAATCGTGCTTTC
TTCACCGGCGGTGGTTCTCGACCTCAGAAACTGATGCTTCGTCGCCTCCATTGTCTTCCCCGCATCAAAA
GATCCAAACTTTGGAAGACAAAGCTTCTAACAAAAGCCGAAGCACGGCGTCAGCAACATCTTCTCTCAAT
GAACAAGAACTTGCCAAATTCTCTGCCATTGCTGATACCTGGTGGCATTCTGAAGGGCCGTTTAAGCCGT
TGCATCTGATGAATCCAACTCGGTTGGCTTTCATCCGCTCCACCTTATGCAGGCATTTCAGTAAGGATCC
GAGTTCTGCTAGGCCTTTTGAAGGGCTGAGACTTATTGATGTAGGTTGTGGCGGTGGACTACTTTCCGAG
CCTCTAGCACGGATGGGAGCAACTGTCACAGGGATTGATGCTGTTGATAAGAATGTCAAAATTGCTCGTC
TTCACGCTGATATGGATCCAGTGACCTCAACAATTGAATACCAATGTACTACAGCAGAAAAGCTAGTGGA
TGACGGGAGGACGTTTGATGCTGTTCTTGCCTTAGAGGTGATCGAACATGTAGCGAACCCTGCAGAGTTC
TGCAAGTCCTTGTCAGCATTGACCATTCCCAACGGAGCCACAGTACTTTCTACAATTAACCGCTCTATGC
GAGCGTATGCATCAGCCATTGTTGCAGCAGAGTACATTCTACAATGGCTTCCTAAAGGCACACACGAGTG
GTCAAGTTTTCTAACTCCTGAAGAACTTACTATGATATTACAACGCGCTTCAGTCGATGTGAAGGAGATG
GCTGGATTTGTGTACAACCCAATAACAGGAAGATGGTTATTGTCAGATGACATAAGTGTGAACTTCATCG
CTTATGGGACGAAAAAAGAATGA
Upstream Sequence
ACTTTCTCTGCGTCGGCGGCGAAAAACCCGACGTCACTCACCGCCGTTTGCTCCACTCCTACACGCCATC
TCTTCCTCATCATCTCGCAATCGCTAATATTTTCTCGAGGAAAATGAATCAAATGCAAAGGATTCTCTCT
GCTCGTCGACTATCTCACTCGCTCATACCTCAATCGTGCTTTCTTCACCGGCGGTGGTTCTCGACCTCAG
AAACTGATGCTTCGTCGCCTCCATTGTCTTCCCCGCATCAAAAGATCCAAACTTTGGAAGACAAAGCTTC
TAACAAAAGCCGAAGCACGGCGTCAGCAACATCTTCTCTCAATGAACAAGAACTTGCCAAATTCTCTGCC
ATTGCTGATACCTGGTGGCATTCTGAAGGGCCGTTTAAGCCGTTGCATCTGATGAATCCAACTCGGTTGG
CTTTCATCCGCTCCACCTTATGCAGGCATTTCAGTAAGGATCCGAGTTCTGCTAGGCCTTTTGAAGGGCT
GAGACTTATTGATGTAGGTTGTGGCGGTGGACTACTTTCCGAGCCTCTAGCACGGATGGGAGCAACTGTC
ACAGGGATTGATGCTGTTGATAAGAATGTCAAAATTGCTCGTCTTCACGCTGATATGGATCCAGTGACCT
CAACAATTGAATACCAATGTACTACAGCAGAAAAGCTAGTGGATGACGGGAGGACGTTTGATGCTGTTCT
TGCCTTAGAGGTGATCGAACATGTAGCGAACCCTGCAGAGTTCTGCAAGTCCTTGTCAGCATTGACCATT
CCCAACGGAGCCACAGTACTTTCTACAATTAACCGCTCTATGCGAGCGTATGCATCAGCCATTGTTGCAG
CAGAGTACATTCTACAATGGCTTCCTAAAGGCACACACGAGTGGTCAAGTTTTCTAACTCCTGAAGAACT
TACTATGATATTACAACGCGCTTCAGTCGATGTGAAGGAGATGGCTGGATTTGTGTACAACCCAATAACA
GGAAGATGGTTATTGTCAGATGACATAAGTGTGAACTTCATCGCTTATGGGACGAAAAAAGAATGATCCT
GAAGACATATAATCGATTGTTCTTCAATCTGTGTATCTCTCTGCATATCTGCTTCTGGAAGTTTATTAGG
ACAGGACAGTAGTTAAATTTGAAATAAGTGAGAG
Downstream Sequence
GGTTCGTCTTCTAAGCTTGATCGTTTACTTGCTTGAATCAATGAAGTGTTGATGGGTTCT
CTTTGAAAAGATCAAAGCTTGAGTCTTTGAGGGCTTTGCGTGATTTGCTTTTGCTCTATG
CTTTTAAGAGTTGAACCTTAGTGTGTAAAGGGTTTGTTACATTATGTGATCAGTGCTGAT
GGGTTCTCTTTAAAAAGTTAAAAGTTTGAGTCTTTGAGGGCTTTGCATGATTTGATTTGA
TCTATGGTATTATATGAAGTGTTGATCGTTTACTTGCTTGAATCAATGAAGTGTTGATGG
GTTCTCTTTAAAAAGATTAAAGCTTTGAGCTTTTGAGGGCCTTGCATGATTTGCTTGGCT
CAGTGAAGTGTTCATTGATTCTTTTAGAAATAGCAAAGCTTTTGAGTTCTATGAGGGATT
TGCATGATCTGATTTATGATATTTGTATGAAGGTGGCATTCTGAAGGGCCGTTTAAGCCG
TTGCATCTGATGAATCCAACTCGGTTGGCTTTCATCCGCTCCACCTTATGCAGGCATTTC
AGGTACAAACTTCTTATGTATACTTTTCGTTTTCTTCTTTTATGTATTGTTGTATCCTTC
TCTTCTGTTGGATTAACTCTGTGTTCTTCTCAGTAAGGATCCGAGTTCTGCTAGGCCTTT
TGAAGGGCTGAGACTTATTGATGTAGGTTGTGGCGGTGGACTACTTTCCGAGGTATTCCT
TTTCATAAGACCAGTTTAAGTTGAGCGTTTGTGGTTACAACTTGGAATGACATTGATTTG
GTGACTAGTGGCTTGTTGTTCTTTTTTTGGTTTGAAGCCTCTAGCACGGATGGGAGCAAC
TGTCACAGGGATTGATGCTGTTGATAAGAATGTCAAAATTGCTCGTCTTCACGCTGTAAG
GTCTCTTACTTGATTGTATCACTTGATTCTGCAGATAACTTAATGTTCTCCGTATGATGA
TGTTGCAGTTCTTCTATCTTGACTTTTATTCTTTGTTGTATGTTAATGAAATGTCTCTGC
AGGATATGGATCCAGTGACCTCAACAATTGAATACCAATGTACTACAGCAGGTACTACTT
TATCCTATTACCTTAAATGAACAATTTAAGTTAGTGTTTTGTGTTTTCTCTCCTATGTTT
ACGTGCTAAAATAGTATTCTCTTGTGCAGAAAAGCTAGTGGATGACGGGAGGACGTTTGA
TGCTGTTCTTGCCTTAGAGGTTTGTCAAACTTCACTGATATTTTATACTAGTTCCATCTA
GTGTTTCCTGATTCATGGCAATTTCTCTTGATTTCTACAATGAAGGTGATCGAACATGTA
GCGAACCCTGCAGAGTTCTGCAAGTCCTTGTCAGCATTGACCATTCCCAACGGAGCCACA
GTACTTTCTACAATTAACCGCTCTATGCGAGCGTATGCATCAGCCATTGTTGCAGCAGAG
TACATTCTACAATGGGTAATCTTCAGTTTCTCATCTCATCTATCCACTGTTTAGACATTT
GTTTGTTGGTTTTTACATTTGGTCATTTGTATGATCAAATCACCTGCAGCTTCCTAAAGG
CACACACGAGTGGTCAAGTTTTCTAACTCCTGAAGAACTTACTATGATATTACAACGCGC
TTCAGTCGATGTAAGCCAACTCCCTCCCCCTTCAAACGCCTATGTGGCTATCTCAAGAAC
TTTATCTTAAGCTGACTGAAAGGGTCTCTCGATGTGAACAAGAAGGATTGTTCATATGTT
TATCTTTAGAGGATTGTTTCAAATATATACTGTGGTAGAAATGGTAACATGAAAACTATG
GTTTGCAGGTGAAGGAGATGGCTGGATTTGTGTACAACCCAATAACAGGAAGATGGTTAT
TGTCAGATGACATAAGTGTGAACTTCATCGCTTATGGGACGAAAAAAGAATGATCCTGAA
GACATATAATCGATTGTTCTTCAATCTGTGTATCTCTCTGCATATCTGCTTCTGGAAGTT
TATTAGGACAGGACAGTAGT
Pro Sequence
MNQMQRILSARRLSHSLIPQSCFLHRRWFSTSETDASSPPLSSPHQKIQT
LEDKASNKSRSTASATSSLNEQELAKFSAIADTWWHSEGPFKPLHLMNPT
RLAFIRSTLCRHFSKDPSSARPFEGLRLIDVGCGGGLLSEPLARMGATVT
GIDAVDKNVKIARLHADMDPVTSTIEYQCTTAEKLVDDGRTFDAVLALEV
IEHVANPAEFCKSLSALTIPNGATVLSTINRSMRAYASAIVAAEYILQWL
PKGTHEWSSFLTPEELTMILQRASVDVKEMAGFVYNPITGRWLLSDDISV
NFIAYGTKKE
mRNA Sequence
ACTTTCTCTGCGTCGGCGGCGAAAAACCCGACGTCACTCACCGCCGTTTGCTCCACTCCTACACGCCATC
TCTTCCTCATCATCTCGCAATCGCTAATATTTTCTCGAGGAAAATGAATCAAATGCAAAGGATTCTCTCT
GCTCGTCGACTATCTCACTCGCTCATACCTCAATCGTGCTTTCTTCACCGGCGGTGGTTCTCGACCTCAG
AAACTGATGCTTCGTCGCCTCCATTGTCTTCCCCGCATCAAAAGATCCAAACTTTGGAAGACAAAGCTTC
TAACAAAAGCCGAAGCACGGCGTCAGCAACATCTTCTCTCAATGAACAAGAACTTGCCAAATTCTCTGCC
ATTGCTGATACCTGGTGGCATTCTGAAGGGCCGTTTAAGCCGTTGCATCTGATGAATCCAACTCGGTTGG
CTTTCATCCGCTCCACCTTATGCAGGCATTTCAGTAAGGATCCGAGTTCTGCTAGGCCTTTTGAAGGGCT
GAGACTTATTGATGTAGGTTGTGGCGGTGGACTACTTTCCGAGCCTCTAGCACGGATGGGAGCAACTGTC
ACAGGGATTGATGCTGTTGATAAGAATGTCAAAATTGCTCGTCTTCACGCTGATATGGATCCAGTGACCT
CAACAATTGAATACCAATGTACTACAGCAGAAAAGCTAGTGGATGACGGGAGGACGTTTGATGCTGTTCT
TGCCTTAGAGGTGATCGAACATGTAGCGAACCCTGCAGAGTTCTGCAAGTCCTTGTCAGCATTGACCATT
CCCAACGGAGCCACAGTACTTTCTACAATTAACCGCTCTATGCGAGCGTATGCATCAGCCATTGTTGCAG
CAGAGTACATTCTACAATGGCTTCCTAAAGGCACACACGAGTGGTCAAGTTTTCTAACTCCTGAAGAACT
TACTATGATATTACAACGCGCTTCAGTCGATGTGAAGGAGATGGCTGGATTTGTGTACAACCCAATAACA
GGAAGATGGTTATTGTCAGATGACATAAGTGTGAACTTCATCGCTTATGGGACGAAAAAAGAATGATCCT
GAAGACATATAATCGATTGTTCTTCAATCTGTGTATCTCTCTGCATATCTGCTTCTGGAAGTTTATTAGG
ACAGGACAGTAGTTAAATTTGAAATAAGTGAGAG