SEARCH

DETAIL

Detail for ZS11_A04G30150.t1

Genome:
ZS11: ZS11_A04G30150.t1
ZS11_v0: BnaA04T0245000ZS
WE: WE_A04G31070.t1
WE_v0: BnaA04T0232900WE
Darmor: A04p29190.1_BnaDAR
BH: BnaA04T254500BH
Quinta: BnaA04T0237400QU
ZS2: BnaA04T245600ZS2
SW: BnaA05T073900SW
Express61: A04p023800.1_BnaEXP
Xiaoyun: BnaC04G0562700XY
P202: BnaC04G046350P202.1
BL: BnaA04T254500BH
TA: BnaA04T251500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA04T264400RB
No2127: BnaA04T0189900NO
P130: BnaC04G067700P130.2
Length: 559
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1083.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0052716(hydroquinone:oxygen oxidoreductase activity),GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013745086.1
NR E-value: Not available
NR Score: 1166.8
NR Annotation: XP_013745086.1 laccase-4-like [Brassica napus]
SwissProt Protein: O80434|LAC4_ARATH
SwissProt E-value: Not available
SwissProt Score: 1089.0
SwissProt Annotation: Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2
CDS Sequence (1703 bp)
ATGAAGTCTCATATGGTTTGGTTTTTGTTTCTTGCATCCTTCTTGTCTGTGTTCCCAGCTCCATCGGAGA
GCATGGTTCGCCATTACAAGTTTAACGTTGTGATGAAGAACATTACTAGACTATGCTCAAGCAAGCCAAC
CGTGACCGTGAACGGTAGATATCCAGGTCCTACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAA
GTCGTTAATCACGTCAAATACAACGTTTCGATCCACTGGCACGGTGTGAGACAAGTGAGAACAGGATGGG
CCGATGGGCCTGCTTACATAACCCAGTGCCCGATCCAGCCAGGTCAAGTCTACACATACAACTACACCTT
GACCGGCCAACGCGGTACCCTCTGGTGGCATGCTCACATCCTCTGGCTCAGAGCCACTGTTTACGGCGCA
ATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTCATAGTTC
TAGGTGAATGGTGGAAATCGGATACGGAAAACGTCATTAACGAGGCACTTAAGTCTGGATTAGCCCCTAA
TGTCTCCGACGCTCACATGATCAACGGACGCCCTGGCCTTGCTAAAAATTGTCCATCTGATCAGGGCTAC
AAATTGTCAGTCAAAAATGGCAAAACCTATTTGCTACGAGTAGTCAATGCTGCACTTAATGAAGAGCTAT
TTTTCAAAGTCGCTGGCCACCTTTTCACGGTGGTTGAAGTCGACGCCGTCTACGTCAAACCGTTCAAGAT
CGACACCATCGTTATAGCCCCCGGTCAAACCACCAACGTCCTCCTAACCGCCTCGAAATCAACCGGCAAA
TACCTTGTAACCGCTTCTCCCTTCATGGACTCCCCAATCGCGGTAGACAATGTAACCGCCACCGCGACTG
TCCATTACTCCGGAACACTATCCTCCTCACCGACAATCCTCACTCTCCCTCCGCCGCAAAACGCTACGTC
CGTCGCCACTAACTTTACAAACTCTCTTCGTAGTCTCAACTCCAAGAAGTACCCTGCCCTAGTCCCGACC
ACCATCGACCACCACCTCTTCTTCACTGTTGGCCTCGGGCTAAACCCGTGTCCTACTTGTAAGGCTGGAA
ACGGTAGCCGTGTCGTGGCCAGTATCAACAATGTAACATTCGTTATGCCTAAAATCGCGTTGCTGCCCGC
TCATTACTTCAACATTAGTGGAGTTTTTACACCAGATTTTCCAAAGAACCCACCGCACGTTTTCAACTAT
AGCGGAGGATCAGTCACGAACATGGCCACGGAAACCGGCACAAGGCTTTACAAGCTACCATACAATGCAA
CGGTGCAGCTGGTTCTCCAAGATACCGGCGTCATAGCGCCGGAGAACCATCCGATTCATCTTCACGGCTA
TAACTTCTTTGAAGTTGGTCGGGGATTAGGTAACTTCAACCCCAAGAAAGATCCAAACAACTTCAATTTG
GTCGATCCGGTTGAGAGGAACACAATCGGAGTACCATCTGGTGGATGGGTCGTCATCAGATTTAGAGCGG
ATAATCCCGGGGTTTGGTTTATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTT
CTTGGTGGAGAACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATTTTCCCAAGTGTTAG
Upstream Sequence
AAGACACGAATATTAAACACACAGAAGAAGAAGAAGGACGAGAAAGAGCGAGAGGAGAGATGAAGTCTCA
TATGGTTTGGTTTTTGTTTCTTGCATCCTTCTTGTCTGTGTTCCCAGCTCCATCGGAGAGCATGGTTCGC
CATTACAAGTTTAACGTTGTGATGAAGAACATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGA
ACGGTAGATATCCAGGTCCTACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAAGTCGTTAATCA
CGTCAAATACAACGTTTCGATCCACTGGCACGGTGTGAGACAAGTGAGAACAGGATGGGCCGATGGGCCT
GCTTACATAACCCAGTGCCCGATCCAGCCAGGTCAAGTCTACACATACAACTACACCTTGACCGGCCAAC
GCGGTACCCTCTGGTGGCATGCTCACATCCTCTGGCTCAGAGCCACTGTTTACGGCGCAATTGTTATCCT
CCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTCATAGTTCTAGGTGAATGG
TGGAAATCGGATACGGAAAACGTCATTAACGAGGCACTTAAGTCTGGATTAGCCCCTAATGTCTCCGACG
CTCACATGATCAACGGACGCCCTGGCCTTGCTAAAAATTGTCCATCTGATCAGGGCTACAAATTGTCAGT
CAAAAATGGCAAAACCTATTTGCTACGAGTAGTCAATGCTGCACTTAATGAAGAGCTATTTTTCAAAGTC
GCTGGCCACCTTTTCACGGTGGTTGAAGTCGACGCCGTCTACGTCAAACCGTTCAAGATCGACACCATCG
TTATAGCCCCCGGTCAAACCACCAACGTCCTCCTAACCGCCTCGAAATCAACCGGCAAATACCTTGTAAC
CGCTTCTCCCTTCATGGACTCCCCAATCGCGGTAGACAATGTAACCGCCACCGCGACTGTCCATTACTCC
GGAACACTATCCTCCTCACCGACAATCCTCACTCTCCCTCCGCCGCAAAACGCTACGTCCGTCGCCACTA
ACTTTACAAACTCTCTTCGTAGTCTCAACTCCAAGAAGTACCCTGCCCTAGTCCCGACCACCATCGACCA
CCACCTCTTCTTCACTGTTGGCCTCGGGCTAAACCCGTGTCCTACTTGTAAGGCTGGAAACGGTAGCCGT
GTCGTGGCCAGTATCAACAATGTAACATTCGTTATGCCTAAAATCGCGTTGCTGCCCGCTCATTACTTCA
ACATTAGTGGAGTTTTTACACCAGATTTTCCAAAGAACCCACCGCACGTTTTCAACTATAGCGGAGGATC
AGTCACGAACATGGCCACGGAAACCGGCACAAGGCTTTACAAGCTACCATACAATGCAACGGTGCAGCTG
GTTCTCCAAGATACCGGCGTCATAGCGCCGGAGAACCATCCGATTCATCTTCACGGCTATAACTTCTTTG
AAGTTGGTCGGGGATTAGGTAACTTCAACCCCAAGAAAGATCCAAACAACTTCAATTTGGTCGATCCGGT
TGAGAGGAACACAATCGGAGTACCATCTGGTGGATGGGTCGTCATCAGATTTAGAGCGGATAATCCCGGG
GTTTGGTTTATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTTCTTGGTGGAGA
ACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATTTTCCCAAGTGTTAGGGTCATTCAAC
TAAACAAGACCACGTCCAAGCAGACCAGTGAGTACTGGTGAAAAATTCATTGTGGATTTTGTTAAAAGTT
AATATTTTTTTAGCAAAGCAAAGGTTCGATTTTTTTCTCAAGCAAAGTTTGAATAAAAGAGGAAAAAAGA
GCAATGTATTATAATAATATTTTTATCATTATATCAAATTACATTTACATTTTGTTATTGTCTTCAACAC
AACGTACTCTTGTATAGCCCATGCGTTTTATTTATTATTTTGGTCCAACA
Downstream Sequence
GTGAGTGAGTCAATATATATCCACATGTATATGTACATGTATATTTTGTATTCGTCTATA
CATGCAAGTATGCAACTTCCATGCCTATATCTTATGCTGCATATCAAATAGTCGCAACAG
ATCCATATATGAACATTCATGATCGACACTTATTCTTAGACGCATTCGAAATTTCGCGCA
GGCTTGTGTAGATTAAAAATTTTTAACAAAAGGGTTTGTAGTGAAATATGTGGCTTTACA
TTGGAGCGTTTGTACTACATGTAGGATATTATTACCTAACATTTTGTAAATATGATTTAT
TTATTATAATTAAGTACTTTTCATATGTATATTATGAGCTTTTACTGACACATATTACTA
AGATTTATGTACATGCGGTGATTTCCCCCCCCTTTAAACATGACAATCATTGTGTGTAAT
TCGATATATAATGTTTTGACGTAAATATGAATGAAGTGAAGCATGTTTTGAGTTTTTGGT
TACAACTTACAATTAGATCATGATTGTGATTTAATTGGTCTGCCTTCTGTCTTACTCTTT
TTTCCTTTTGCCTAATAACTTTGTAATATTATTATTTTTTATTATATATGTTTCTGAAAA
TCACACAGGTTGTGATGAAGAACATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCG
TGAACGGTAGATATCCAGGTCCTACAATCTACGCACGAGAAGACGACACGTTGCTCATCA
AAGTCGTTAATCACGTCAAATACAACGTTTCGATCCACTGGTAAGATCCTACTTAATCTT
CAACTGAATCATCACCAAAGTTCATTATCTAATTGAATGGTGACTGTGGACGACCGAGAA
CAGGCACGGTGTGAGACAAGTGAGAACAGGATGGGCCGATGGGCCTGCTTACATAACCCA
GTGCCCGATCCAGCCAGGTCAAGTCTACACATACAACTACACCTTGACCGGCCAACGCGG
TACCCTCTGGTGGCATGCTCACATCCTCTGGCTCAGAGCCACTGTTTACGGCGCAATTGT
TATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTCAT
AGTTCTAGGTATTGTTTTGAGCCATGTATAACAAGAATGTTCAGGTCCATCTTATTTTTA
ACTCTCGTTACTTTCAACCCACCATACATTTTGAACCTGGCGATGAAACTAAATTTGAGT
CGTCGACCTATTAAACTATTTATTAGGAATCACACATTCGAAATATATAAGATAACTTAA
AAATTTTATATGGATTTAATCTATTCATTACCAAGTGGTTTTGAGTTGAAATTCTATGTA
ACTTAACATTATTAACATTAGTTGCTATTGGTTCATTACATTGGATATATGTAAATTTGG
CATGACTAAAAGTCCATCATAATTGCAGGTGAATGGTGGAAATCGGATACGGAAAACGTC
ATTAACGAGGCACTTAAGTCTGGATTAGCCCCTAATGTCTCCGACGCTCACATGATCAAC
GGACGCCCTGGCCTTGCTAAAAATTGTCCATCTGATCAGGGTAAAATCTTTATTTTATTT
ATATGATCACTGGCATTATAACTACAAATTTACTGATTATTAAAGTCTCTTTATAATGTA
CACCGGAAGGCTACAAATTGTCAGTCAAAAATGGCAAAACCTATTTGCTACGAGTAGTCA
ATGCTGCACTTAATGAAGAGCTATTTTTCAAAGTCGCTGGCCACCTTTTCACGGTGGTTG
AAGTCGACGCCGTCTACGTCAAACCGTTCAAGATCGACACCATCGTTATAGCCCCCGGTC
AAACCACCAACGTCCTCCTAACCGCCTCGAAATCAACCGGCAAATACCTTGTAACCGCTT
CTCCCTTCATGGACTCCCCAATCGCGGTAGACAATGTAACCGCCACCGCGACTGTCCATT
ACTCCGGAACACTATCCTCCTCACCGACAATCCTCACTCTCCCTCCGCCGCAAAACGCTA
CGTCCGTCGCCACTAACTTT
Pro Sequence
MKSHMVWFLFLASFLSVFPAPSESMVRHYKFNVVMKNITRLCSSKPTVTV
NGRYPGPTIYAREDDTLLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYI
TQCPIQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVYGAIVILPKRGVP
YPFPKPDHEKVIVLGEWWKSDTENVINEALKSGLAPNVSDAHMINGRPGL
AKNCPSDQGYKLSVKNGKTYLLRVVNAALNEELFFKVAGHLFTVVEVDAV
YVKPFKIDTIVIAPGQTTNVLLTASKSTGKYLVTASPFMDSPIAVDNVTA
TATVHYSGTLSSSPTILTLPPPQNATSVATNFTNSLRSLNSKKYPALVPT
TIDHHLFFTVGLGLNPCPTCKAGNGSRVVASINNVTFVMPKIALLPAHYF
NISGVFTPDFPKNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQ
DTGVIAPENHPIHLHGYNFFEVGRGLGNFNPKKDPNNFNLVDPVERNTIG
VPSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSIL
PPPKDFPKC
mRNA Sequence
AAGACACGAATATTAAACACACAGAAGAAGAAGAAGGACGAGAAAGAGCGAGAGGAGAGATGAAGTCTCA
TATGGTTTGGTTTTTGTTTCTTGCATCCTTCTTGTCTGTGTTCCCAGCTCCATCGGAGAGCATGGTTCGC
CATTACAAGTTTAACGTTGTGATGAAGAACATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGA
ACGGTAGATATCCAGGTCCTACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAAGTCGTTAATCA
CGTCAAATACAACGTTTCGATCCACTGGCACGGTGTGAGACAAGTGAGAACAGGATGGGCCGATGGGCCT
GCTTACATAACCCAGTGCCCGATCCAGCCAGGTCAAGTCTACACATACAACTACACCTTGACCGGCCAAC
GCGGTACCCTCTGGTGGCATGCTCACATCCTCTGGCTCAGAGCCACTGTTTACGGCGCAATTGTTATCCT
CCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTCATAGTTCTAGGTGAATGG
TGGAAATCGGATACGGAAAACGTCATTAACGAGGCACTTAAGTCTGGATTAGCCCCTAATGTCTCCGACG
CTCACATGATCAACGGACGCCCTGGCCTTGCTAAAAATTGTCCATCTGATCAGGGCTACAAATTGTCAGT
CAAAAATGGCAAAACCTATTTGCTACGAGTAGTCAATGCTGCACTTAATGAAGAGCTATTTTTCAAAGTC
GCTGGCCACCTTTTCACGGTGGTTGAAGTCGACGCCGTCTACGTCAAACCGTTCAAGATCGACACCATCG
TTATAGCCCCCGGTCAAACCACCAACGTCCTCCTAACCGCCTCGAAATCAACCGGCAAATACCTTGTAAC
CGCTTCTCCCTTCATGGACTCCCCAATCGCGGTAGACAATGTAACCGCCACCGCGACTGTCCATTACTCC
GGAACACTATCCTCCTCACCGACAATCCTCACTCTCCCTCCGCCGCAAAACGCTACGTCCGTCGCCACTA
ACTTTACAAACTCTCTTCGTAGTCTCAACTCCAAGAAGTACCCTGCCCTAGTCCCGACCACCATCGACCA
CCACCTCTTCTTCACTGTTGGCCTCGGGCTAAACCCGTGTCCTACTTGTAAGGCTGGAAACGGTAGCCGT
GTCGTGGCCAGTATCAACAATGTAACATTCGTTATGCCTAAAATCGCGTTGCTGCCCGCTCATTACTTCA
ACATTAGTGGAGTTTTTACACCAGATTTTCCAAAGAACCCACCGCACGTTTTCAACTATAGCGGAGGATC
AGTCACGAACATGGCCACGGAAACCGGCACAAGGCTTTACAAGCTACCATACAATGCAACGGTGCAGCTG
GTTCTCCAAGATACCGGCGTCATAGCGCCGGAGAACCATCCGATTCATCTTCACGGCTATAACTTCTTTG
AAGTTGGTCGGGGATTAGGTAACTTCAACCCCAAGAAAGATCCAAACAACTTCAATTTGGTCGATCCGGT
TGAGAGGAACACAATCGGAGTACCATCTGGTGGATGGGTCGTCATCAGATTTAGAGCGGATAATCCCGGG
GTTTGGTTTATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTTCTTGGTGGAGA
ACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATTTTCCCAAGTGTTAGGGTCATTCAAC
TAAACAAGACCACGTCCAAGCAGACCAGTGAGTACTGGTGAAAAATTCATTGTGGATTTTGTTAAAAGTT
AATATTTTTTTAGCAAAGCAAAGGTTCGATTTTTTTCTCAAGCAAAGTTTGAATAAAAGAGGAAAAAAGA
GCAATGTATTATAATAATATTTTTATCATTATATCAAATTACATTTACATTTTGTTATTGTCTTCAACAC
AACGTACTCTTGTATAGCCCATGCGTTTTATTTATTATTTTGGTCCAACA