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Detail for ZS11_A04G35680.t1

Genome:
ZS11: ZS11_A04G35680.t1
ZS11_v0: BnaA04T0293500ZS
WE: WE_A04G36700.t1
WE_v0: BnaA04T0279700WE
Darmor: A04p34470.1_BnaDAR
BH: BnaA04T310000BH
Quinta: BnaA04T0283700QU
ZS2: BnaA04T295600ZS2
SW: BnaA04T329700SW
Express61: A04p028440.1_BnaEXP
Xiaoyun: BnaA04G0300600XY
P202: BnaA04G022230P202.1
BL: BnaA04T310000BH
TA: BnaA04T303700TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA04T314400RB
No2127: BnaA04T0237100NO
P130: BnaC04G072600P130.3
Length: 593
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1066.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: CDY61729.1
NR E-value: Not available
NR Score: 1172.9
NR Annotation: CDY61729.1 BnaA04g27180D [Brassica napus]
SwissProt Protein: Q9ZPY2|LAC6_ARATH
SwissProt E-value: Not available
SwissProt Score: 1066.0
SwissProt Annotation: Laccase-6 OS=Arabidopsis thaliana OX=3702 GN=LAC6 PE=2 SV=1
CDS Sequence (1807 bp)
ATGACCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAACGTGCCACGCTGCAACTAGGATCTATCACTTTAAAGTACAAACAATGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGGAAGTTCCCTGGCCCTGCAATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCCTATAATGCCACAATTCATTGGTATGCATCTACATATG
TACACAAGCTTATAAGAAAAATTAGACTAACAAGATTTGTTTCTGTTATATACAGGCATGGTATTAAGCA
AAAACTATCATGCTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGTTTC
ACATACAACTTCACAGTGGCGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAG
CTACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAGCCCTTCAA
AGAACATACAATTCTCCTAGGAGAGTATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAG
AGTGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATCAATGGTCAACCAGGACCTAACTACAATTGCT
CCTCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTGAGGCTGATAAACGCTGG
CATCAACATGGAGAGCTTCTTCACCATAGCTAATCACAGGCTGACCATAGTGGAAGTAGACGGCGAGTAC
ACCAAACCTTTCACAACGGAGCGTGTGATGCTTGTGCCTGGACAGACCATGAACGTTCTCCTGGCAGCTG
ATCAAGCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACA
CACATCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTA
CCTGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTTTAAAGACAGTTGATG
TTCCAGAAGATGTCGATGCTCATCTCTTCATCACAGTTGGGGTAAATGTAAACAAGTGTAACTCTGAGAA
TCCAAACAACAAGTGCCAAGGGCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTTCAAC
GAACCTAAGGTCTCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGATACTTCACTTTAGACTTCCCAA
CAGTACCTGAAAAATCCTATGACTTTGTCAATGGAGCACCCAATGACATAGCCAATGACACGCAGGCTGC
AAACGGGACGAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGGCACT
CTCACAACTGAGAACCATCCGATTCATCTCCACGGGCATAGCTTTTATGTTATTGGCTATGGCACAGGGA
ACTATGATCATCGAACGGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCCCAGT
AGGAGGATGGGCTGCTATTCGTTTTGTTGCTGACAATCCAGGGCTCTGGTTATTGCATTGCCATTTTGAT
ATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAACGGCAAGACGGTGGCTGAGAGTCTAC
CTCATCCTCCTGCAGATCTACCAAAGTGCTAG
Upstream Sequence
ATGACCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAACGTGCCACGCTGCAACTAGGATCTATCACTTTAAAGTACAAACAATGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGGAAGTTCCCTGGCCCTGCAATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCCTATAATGCCACAATTCATTGGTATGCATCTACATATG
TACACAAGCTTATAAGAAAAATTAGACTAACAAGATTTGTTTCTGTTATATACAGGCATGGTATTAAGCA
AAAACTATCATGCTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGTTTC
ACATACAACTTCACAGTGGCGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAG
CTACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAGCCCTTCAA
AGAACATACAATTCTCCTAGGAGAGTATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAG
AGTGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATCAATGGTCAACCAGGACCTAACTACAATTGCT
CCTCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTGAGGCTGATAAACGCTGG
CATCAACATGGAGAGCTTCTTCACCATAGCTAATCACAGGCTGACCATAGTGGAAGTAGACGGCGAGTAC
ACCAAACCTTTCACAACGGAGCGTGTGATGCTTGTGCCTGGACAGACCATGAACGTTCTCCTGGCAGCTG
ATCAAGCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACA
CACATCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTA
CCTGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTTTAAAGACAGTTGATG
TTCCAGAAGATGTCGATGCTCATCTCTTCATCACAGTTGGGGTAAATGTAAACAAGTGTAACTCTGAGAA
TCCAAACAACAAGTGCCAAGGGCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTTCAAC
GAACCTAAGGTCTCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGATACTTCACTTTAGACTTCCCAA
CAGTACCTGAAAAATCCTATGACTTTGTCAATGGAGCACCCAATGACATAGCCAATGACACGCAGGCTGC
AAACGGGACGAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGGCACT
CTCACAACTGAGAACCATCCGATTCATCTCCACGGGCATAGCTTTTATGTTATTGGCTATGGCACAGGGA
ACTATGATCATCGAACGGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCCCAGT
AGGAGGATGGGCTGCTATTCGTTTTGTTGCTGACAATCCAGGGCTCTGGTTATTGCATTGCCATTTTGAT
ATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAACGGCAAGACGGTGGCTGAGAGTCTAC
CTCATCCTCCTGCAGATCTACCAAAGTGCTAG
Downstream Sequence
GTAAGTATTAACACTATTCAAACCATAATCAATGTTTTATCTTATGTGTACTACTAAACA
GAGTTCTACTGTGTACCAATTTTATAATAGGTACAAACAATGAGACTCACCAGGCTGTGC
CAGACAAAAGAGATTGTGACAATCAACGGGAAGTTCCCTGGCCCTGCAATAACCGCTCAA
GAAGATGACAACATTGTCGTTAATGTTATCAACATGACCCCCTATAATGCCACAATTCAT
TGGTATGCATCTACATATGTACACAAGCTTATAAGAAAAATTAGACTAACAAGATTTGTT
TCTGTTATATACAGGCATGGTATTAAGCAAAAACTATCATGCTGGTACGATGGTCCATCT
TACATCACACAATGTCCAATTCAGAGCGGACAGAGTTTCACATACAACTTCACAGTGGCG
CAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAGCTACTGTATAC
GGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAGCCCTTCAAA
GAACATACAATTCTCCTAGGTGATCTATAAAGCTATTCTCTTTCACTAATTGCCTTTACT
GAGTTGTTTGTCATATCTAGGAGAGTATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACA
TGTACTGGAGAGTGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATCAATGGTCAACC
AGGACCTAACTACAATTGCTCCTCTAAAGGTAATACATATGAAATTGAATATGATTATTG
ATCCTTGTTTTAATATCTTTATATTATTCAGATGTTTATGAACTTGAGATAGTGCCAAGG
AAGACATACCTGCTGAGGCTGATAAACGCTGGCATCAACATGGAGAGCTTCTTCACCATA
GCTAATCACAGGCTGACCATAGTGGAAGTAGACGGCGAGTACACCAAACCTTTCACAACG
GAGCGTGTGATGCTTGTGCCTGGACAGACCATGAACGTTCTCCTGGCAGCTGATCAAGCC
ATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAA
CACACATCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCA
CCAGCTAAGTTACCTGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTC
AGAAGTTTAAAGACAGTTGATGTTCCAGAAGATGTCGATGCTCATCTCTTCATCACAGTT
GGGGTAAATGTAAACAAGTGTAACTCTGAGAATCCAAACAACAAGTGCCAAGGGCCCAGA
CAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTTCAACGAACCTAAGGTCTCGATT
CTGGAAGCTTATTACAAGAAACTGGAAGGATACTTCACTTTAGACTTCCCAACAGTACCT
GAAAAATCCTATGACTTTGTCAATGGAGCACCCAATGACATAGCCAATGACACGCAGGCT
GCAAACGGGACGAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAG
AACACTGGCACTCTCACAACTGAGAACCATCCGATTCATCTCCACGGGCATAGCTTTTAT
GTTATTGGCTATGGCACAGGGAACTATGATCATCGAACGGCACGGTTTAACCTGGAGGAT
CCTCCTTACTTGAACACTATTGGAGTCCCAGTAGGAGGATGGGCTGCTATTCGTTTTGTT
GCTGACAATCCAGGTATTCGTATTCACAACACTCCTTAGCATCACATTTTGCTAATAAGT
TTCTTCTTCTGATAATGAAACAGGGCTCTGGTTATTGCATTGCCATTTTGATATCCATCA
AACATGGGGAATGAGCACAATGTTTATAGTGAAAAACGGCAAGACGGTGGCTGAGAGTCT
ACCTCATCCTCCTGCAGATCTACCAAAGTGCTAGCTTCATCGAAATTAACAAATGATGAC
AAGGGAAGAATCTTTTTGGC
Pro Sequence
MTSSSVSSLLRLSFCLFILQVMNIGTCHAATRIYHFKVQTMRLTRLCQTK
EIVTINGKFPGPAITAQEDDNIVVNVINMTPYNATIHWYASTYVHKLIRK
IRLTRFVSVIYRHGIKQKLSCWYDGPSYITQCPIQSGQSFTYNFTVAQQK
GTFFWHAHFSWLRATVYGPLIVYPKANVPYPFKKPFKEHTILLGEYWLKN
VVELEKHVLESGGPPPPADAFTINGQPGPNYNCSSKDVYELEIVPRKTYL
LRLINAGINMESFFTIANHRLTIVEVDGEYTKPFTTERVMLVPGQTMNVL
LAADQAIGRYSIAMGPYESAKNVKFQHTSAIASLRYFGAFPNSVASPAKL
PVFNDNIAVKTVMDGLRSLKTVDVPEDVDAHLFITVGVNVNKCNSENPNN
KCQGPRQGRLAASMNNISFNEPKVSILEAYYKKLEGYFTLDFPTVPEKSY
DFVNGAPNDIANDTQAANGTRAMVFEYGSRIQIIFQNTGTLTTENHPIHL
HGHSFYVIGYGTGNYDHRTARFNLEDPPYLNTIGVPVGGWAAIRFVADNP
GLWLLHCHFDIHQTWGMSTMFIVKNGKTVAESLPHPPADLPKC
mRNA Sequence
ATGACCAGTTCCTCTGTCTCCTCCTTGCTCCGTCTTAGCTTTTGCTTGTTCATTCTTCAAGTAATGAACA
TTGGAACGTGCCACGCTGCAACTAGGATCTATCACTTTAAAGTACAAACAATGAGACTCACCAGGCTGTG
CCAGACAAAAGAGATTGTGACAATCAACGGGAAGTTCCCTGGCCCTGCAATAACCGCTCAAGAAGATGAC
AACATTGTCGTTAATGTTATCAACATGACCCCCTATAATGCCACAATTCATTGGTATGCATCTACATATG
TACACAAGCTTATAAGAAAAATTAGACTAACAAGATTTGTTTCTGTTATATACAGGCATGGTATTAAGCA
AAAACTATCATGCTGGTACGATGGTCCATCTTACATCACACAATGTCCAATTCAGAGCGGACAGAGTTTC
ACATACAACTTCACAGTGGCGCAACAAAAGGGCACATTCTTTTGGCATGCACACTTTTCTTGGCTTAGAG
CTACTGTATACGGTCCGCTTATTGTATATCCTAAAGCTAATGTTCCTTACCCATTCAAGAAGCCCTTCAA
AGAACATACAATTCTCCTAGGAGAGTATTGGCTTAAGAACGTGGTGGAGCTTGAAAAACATGTACTGGAG
AGTGGAGGACCTCCTCCTCCAGCAGATGCATTCACAATCAATGGTCAACCAGGACCTAACTACAATTGCT
CCTCTAAAGATGTTTATGAACTTGAGATAGTGCCAAGGAAGACATACCTGCTGAGGCTGATAAACGCTGG
CATCAACATGGAGAGCTTCTTCACCATAGCTAATCACAGGCTGACCATAGTGGAAGTAGACGGCGAGTAC
ACCAAACCTTTCACAACGGAGCGTGTGATGCTTGTGCCTGGACAGACCATGAACGTTCTCCTGGCAGCTG
ATCAAGCCATTGGGAGATACTCCATCGCCATGGGTCCGTACGAGTCTGCAAAGAACGTCAAGTTTCAACA
CACATCAGCGATAGCTAGTCTCCGATACTTTGGTGCATTCCCCAACAGTGTAGCGTCACCAGCTAAGTTA
CCTGTTTTCAATGATAACATTGCTGTTAAGACTGTCATGGATGGGCTCAGAAGTTTAAAGACAGTTGATG
TTCCAGAAGATGTCGATGCTCATCTCTTCATCACAGTTGGGGTAAATGTAAACAAGTGTAACTCTGAGAA
TCCAAACAACAAGTGCCAAGGGCCCAGACAAGGAAGACTAGCAGCTTCAATGAACAACATCAGCTTCAAC
GAACCTAAGGTCTCGATTCTGGAAGCTTATTACAAGAAACTGGAAGGATACTTCACTTTAGACTTCCCAA
CAGTACCTGAAAAATCCTATGACTTTGTCAATGGAGCACCCAATGACATAGCCAATGACACGCAGGCTGC
AAACGGGACGAGAGCAATGGTTTTCGAGTATGGGAGCAGGATACAGATCATCTTCCAGAACACTGGCACT
CTCACAACTGAGAACCATCCGATTCATCTCCACGGGCATAGCTTTTATGTTATTGGCTATGGCACAGGGA
ACTATGATCATCGAACGGCACGGTTTAACCTGGAGGATCCTCCTTACTTGAACACTATTGGAGTCCCAGT
AGGAGGATGGGCTGCTATTCGTTTTGTTGCTGACAATCCAGGGCTCTGGTTATTGCATTGCCATTTTGAT
ATCCATCAAACATGGGGAATGAGCACAATGTTTATAGTGAAAAACGGCAAGACGGTGGCTGAGAGTCTAC
CTCATCCTCCTGCAGATCTACCAAAGTGCTAG