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Detail for ZS11_A05G01650.t1

Genome:
ZS11: ZS11_A05G01650.t1
ZS11_v0: BnaA05T0014700ZS
WE: WE_A03G26110.t1
WE_v0: BnaA05T0005700WE
Darmor: A05p01300.1_BnaDAR
BH: BnaA05T017800BH
Quinta: BnaA05T0012400QU
ZS2: BnaA05T014800ZS2
SW: BnaA05T011500SW
Express61: A05p001220.1_BnaEXP
Xiaoyun: BnaC04G0015900XY
P202: BnaA03G019850P202.1
BL: BnaA05T017800BH
TA: BnaC04T016600TA
Da-Ae: Not available
RB: BnaA05T016800RB
No2127: BnaA05T0005500NO
P130: BnaA05G001310P130.1
Length: 137
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0006121(mitochondrial electron transport, succinate to ubiquinone)
Cellular Component: GO:0005743(mitochondrial inner membrane),GO:0005749(mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)),GO:0016020(membrane)
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013747630.1
NR E-value: 2.700000e-65
NR Score: 253.1
NR Annotation: XP_013747630.1 succinate dehydrogenase subunit 4, mitochondrial-like [Brassica napus]
SwissProt Protein: Q941A0|SDH4_ARATH
SwissProt E-value: 1.070000e-57
SwissProt Score: 179.0
SwissProt Annotation: Succinate dehydrogenase subunit 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH4 PE=1 SV=1
CDS Sequence (419 bp)
ATGTCTCTCCGTCGTTCCATCCTCGGCCTCCACCGCCAAACCCACAACCTCTCTCTCTCAAAGTCTTCAC
CTTTCCCAATCACCAACATCTCCTCCCCTTCCGCCGCCGTGATCGGAAGAGAAATCTCCTCGACCCCATT
TTCACTAACCCAGAAACTCAAACCGGACTCCGTTAATCTCGTCGCCGATCGTTCTCTCGGGCAATCTCAG
CTGGCTCGTCTCCCGGCTTCTCGAGGCTACAGCAACGCGTCTCTCGTACGGAAGATCCCTGTTCTGTTCC
ACATCAACGCGGGGATGGAGGAGGTTTTGGCGGATTACGTTCACCAAGAGCTGACCAGGAATCTGATGGT
GATCTCTCTGGGGTTGTTCCAGATCATCGTTATCAAAGACGTCGTCGTGTTTCTTTTCTTCTGA
Upstream Sequence
TTAATTACTTCACCTCATTTTAAAGTTTGGGCTTCTAGTAAAATTATAAAAAGCCCATCCTCAAAAAGCC
CAACTCGGCTTCACTGCTTCTTCTCCTCTCCTCCATTTCTCATTTGCTTAGTTTTGTTTTTTCTCCGATC
AGATCCAAAAAGTAACTTCCCTTCCTTCGCCGCGATGTCTCTCCGTCGTTCCATCCTCGGCCTCCACCGC
CAAACCCACAACCTCTCTCTCTCAAAGTCTTCACCTTTCCCAATCACCAACATCTCCTCCCCTTCCGCCG
CCGTGATCGGAAGAGAAATCTCCTCGACCCCATTTTCACTAACCCAGAAACTCAAACCGGACTCCGTTAA
TCTCGTCGCCGATCGTTCTCTCGGGCAATCTCAGCTGGCTCGTCTCCCGGCTTCTCGAGGCTACAGCAAC
GCGTCTCTCGTACGGAAGATCCCTGTTCTGTTCCACATCAACGCGGGGATGGAGGAGGTTTTGGCGGATT
ACGTTCACCAAGAGCTGACCAGGAATCTGATGGTGATCTCTCTGGGGTTGTTCCAGATCATCGTTATCAA
AGACGTCGTCGTGTTTCTTTTCTTCTGAGCAAAAGGAATCATCTTTTGGGGTCTCTCTCTATCACCTGTT
TAATGAAATAGTGAGCTAAAGTCTCTTCCTTTTTGTTTTATCTTTCTTCTGTTATGAATAAGAACATTGA
TGCTTGTGTTGCTTCAGTTTCTCTTGTTTTCAAAGTTTGATTCAGTTCGTATAAGGCTTAAGTGGAATTA
ATAACTTTCCTGGATTGTAGACAAGAGTATGTCTCCTGAGGTGGAGTAATAAGACTCTCTCTATTTAAGC
TTTGAATTGAATAAAAGAGAAGTTTTC
Downstream Sequence
GCAAAAGGAATCATCTTTTGGGGTCTCTCTCTATCACCTGTTTAATGAAATAGTGAGCTA
AAGTCTCTTCCTTTTTGTTTTATCTTTCTTCTGTTATGAATAAGAACATTGATGCTTGTG
TTGCTTCAGTTTCTCTTGTTTTCAAAGTTTGATTCAGTTCGTATAAGGCTTAAGTGGAAT
TAATAACTTTCCTGGATTGTAGACAAGAGTATGTCTCCTGAGGTGGAGTAATAAGACTCT
CTCTATTTAAGCTTTGAATTGAATAAAAGAGAAGTTTTCTCAGCTCTCTTCTTTATAATT
TTCATCAAATTTTGTTATTCCATACTCAACAAGTCATCAGAAGAGAGAAATCAAACATAG
AGATCATTCCTAGGCTGTACGGTTCATACCACAATTTAACCATTGCTTCCACTTGAAATG
TATTGATGTGTGGCTCAAGATTCATGATTCATGCCCTATTTGTCGAGACTCGCGCGCATA
AAGATAGAAACCATGGGTTATATTTATATGGCGACTAGTGTTTGGTTCATTCATGCTTTA
GTTGTTGGATTCTGTTAAAACGTTACAATGAATGCCCACTTTTTTAATTTGTCTATATAC
ATGTGCGAGTGTTTACTATGGAGTGAAGATTGTTGTACTTGATTATAAGACTAGTGACTG
ATAACTTTTAAAAAAAATGTTTATACCCAAGCAGAGTGCATATAGGAATCGGTATCATTC
TGCCCCCACTATGTTCATTCCACAACACTTTGTAAAAAACATTTCTAAGATCAAACACCC
CATCTAGAAGGATTATCACTCTCTGTTTCTTTTGATATTTTGATCGTTGTTTCTTTGTGT
TCATATATTGTGGATCCACTCTGTTACAGACAAAATACATGTGACTACTTTCAAATCCAC
TATGTCAAGTCAACACATGGTGCCCCTTGTGTAATGACAACGGATCTTAAAGAACAACAG
AGGCTATGGCTATTGAACAAAAGTTACACGAACTCATAAAAGACATGATAATTAACTCAA
CATCGCAAACAAACAAAAAAAAAAGAGTCCACAAAATATCTTCAAAGTTTTGATTATGTT
TATGGAAGAAACTACATAGAACATATTATGACGAAAATTAATTAAATCTCGGAGATTAGC
AGTTAACAACCTTAAACGTGGAAAATGATCGTCATCATCAATCAATATCATCAAACATCT
TCACCTTCATCAATCGTCCATCCCAGCTGACGAGGTCTCCTCTGATCCACCACCGCAGCC
GTCTCCGCCGGCAAATCGGCCAGCGTCGCGAGAGAAGAAGACGAAGAAAGCGACTGCAGA
TTCGAAGAAGACGACGACGAAGCCGCCGGGAAGTTCATAGCCATGATGTTGCCCTCGCTC
CACGACCTCCGGATCGGGAACGAGATGCTCTCCGAGCTCCCGTGGCGTCGGCAAGGCTTC
CGCCGCTGGTTTTGACTCTTCTTGGCGCCGTCGTGAAGCGCGCAGTCGCAGTTTTTGTGG
TAGGGACGCCGCTCGATGGCGGAGTCGAGGCCGGAGATGCAGCCTTCGAAGATGCAGCGG
AATATTCCGTCGGCGGCGGACATCGTTTGGTCTTCGAGATCCAGGCGGAGATAAACAAAG
AAAGGATCCGAGTCTTTCGCGGAACTCAGATTTAACTTTTAACTTATATAAATAAAGACA
GGTTTGTTTGTTTGTTTGTTTGTGTGTAATAAGTTAGTTATCACGTGTACGTGTTTATTA
AATGGGCCCAATAAAAGCAGCGCTAACAACGTGTCTGGGCACTATATAAATATCGCGTCT
TTATTGGGCCCATCTCAACCTACGCGTGATTCATTTACTTTAACTAAATTAAATTAATCG
ACGGCGCAATGGTTGCCAGCCTGGCACTAGTTAAACGATGTCGTTTCAAGCCAATCCCTA
GAAAACGACGCTGTTTAAGGTGTTCGGCTGAAACGACGACGTTTAGTTAACAACAATTGG
GCCTCACATGTAAATAAAGG
Pro Sequence
MSLRRSILGLHRQTHNLSLSKSSPFPITNISSPSAAVIGREISSTPFSLT
QKLKPDSVNLVADRSLGQSQLARLPASRGYSNASLVRKIPVLFHINAGME
EVLADYVHQELTRNLMVISLGLFQIIVIKDVVVFLFF
mRNA Sequence
TTAATTACTTCACCTCATTTTAAAGTTTGGGCTTCTAGTAAAATTATAAAAAGCCCATCCTCAAAAAGCC
CAACTCGGCTTCACTGCTTCTTCTCCTCTCCTCCATTTCTCATTTGCTTAGTTTTGTTTTTTCTCCGATC
AGATCCAAAAAGTAACTTCCCTTCCTTCGCCGCGATGTCTCTCCGTCGTTCCATCCTCGGCCTCCACCGC
CAAACCCACAACCTCTCTCTCTCAAAGTCTTCACCTTTCCCAATCACCAACATCTCCTCCCCTTCCGCCG
CCGTGATCGGAAGAGAAATCTCCTCGACCCCATTTTCACTAACCCAGAAACTCAAACCGGACTCCGTTAA
TCTCGTCGCCGATCGTTCTCTCGGGCAATCTCAGCTGGCTCGTCTCCCGGCTTCTCGAGGCTACAGCAAC
GCGTCTCTCGTACGGAAGATCCCTGTTCTGTTCCACATCAACGCGGGGATGGAGGAGGTTTTGGCGGATT
ACGTTCACCAAGAGCTGACCAGGAATCTGATGGTGATCTCTCTGGGGTTGTTCCAGATCATCGTTATCAA
AGACGTCGTCGTGTTTCTTTTCTTCTGAGCAAAAGGAATCATCTTTTGGGGTCTCTCTCTATCACCTGTT
TAATGAAATAGTGAGCTAAAGTCTCTTCCTTTTTGTTTTATCTTTCTTCTGTTATGAATAAGAACATTGA
TGCTTGTGTTGCTTCAGTTTCTCTTGTTTTCAAAGTTTGATTCAGTTCGTATAAGGCTTAAGTGGAATTA
ATAACTTTCCTGGATTGTAGACAAGAGTATGTCTCCTGAGGTGGAGTAATAAGACTCTCTCTATTTAAGC
TTTGAATTGAATAAAAGAGAAGTTTTC