SEARCH

DETAIL

Detail for ZS11_A05G04990.t1

Genome:
ZS11: ZS11_A05G04990.t1
ZS11_v0: BnaC04T0051300ZS
WE: WE_C04G05860.t1
WE_v0: BnaC04T0050800WE
Darmor: C04p05420.1_BnaDAR
BH: BnaC04T053200BH
Quinta: BnaC04T0050100QU
ZS2: BnaA05T046500ZS2
SW: BnaC04T051400SW
Express61: C04p004920.1_BnaEXP
Xiaoyun: BnaC04G0050900XY
P202: BnaA05G004560P202.1
BL: BnaC04T053200BH
TA: BnaA05T045600TA
Da-Ae: Not available
RB: BnaC04T048200RB
No2127: BnaC04T0049800NO
P130: BnaA05G004180P130.1
Length: 104
KOG ID: KOG3363
KOG E-value: 1.760000e-53
KOG Score: 166.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K09008 NDUFAF3; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
NR Protein: VDC69733.1
NR E-value: 9.800000e-39
NR Score: 164.5
NR Annotation: VDC69733.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q6DFN1|NDUF3_XENTR
SwissProt E-value: 6.710000e-11
SwissProt Score: 58.9
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1
CDS Sequence (319 bp)
ATGTCCATCCAAGATTCCAACATCACCTCCAATAGTTCAACGAGACGAGTTTCATACGAAGGTAGCTTGC
TCTGTGTCGGGAACTTGCTTATCTTGTCTATCTTCCAGACTGTTCGACCTATTCCAGAGCTCTTAATTGT
TGGTTGTGGAAGGAACATTCACCCCGTAACTCCCGAGGTCCGTCAGTTTGTGAAGTCTATTGGCATGAAG
CTAGAAACCGTTGATTCTAGAAATGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTG
CTGCTGCATTGCTTCCATATGGAGTTGCATCTTAA
Upstream Sequence
ATGTCCATCCAAGATTCCAACATCACCTCCAATAGTTCAACGAGACGAGTTTCATACGAAGGTAGCTTGC
TCTGTGTCGGGAACTTGCTTATCTTGTCTATCTTCCAGACTGTTCGACCTATTCCAGAGCTCTTAATTGT
TGGTTGTGGAAGGAACATTCACCCCGTAACTCCCGAGGTCCGTCAGTTTGTGAAGTCTATTGGCATGAAG
CTAGAAACCGTTGATTCTAGAAATGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTG
CTGCTGCATTGCTTCCATATGGAGTTGCATCTTAA
Downstream Sequence
GTAATACGAGAGTAATCTCAATTCGAACATCTACCCTTTTCGGTTTTGGAGTTTGATTCT
CAGTGGTTGGTTGGATTGTGCAGGTTCAACGAGACGAGTTTCATACGAAGGTAGCTTGCT
CTGTGTCGGGAACTTGCTTATGTAATGGACCCCTCGTCAATTCTCTGAGATCACCCCTGT
TAGGTAGTTGAAATGAAACCTCCCTCTTCTCTAAAAGACAACAGCTCCAGTCTTTAAGCT
ATGTAGATACTTTAGTCATTGGTTTCTCTGTCTTGGATTCTAACCAATTTGATGTCGCAA
CCTGATGTTGCTTTTTTAATTGTTTTGAGTGAACTTTATGTGCTTTTTGATGTTCATTGT
CATCAAAAGGGGTTTGATCAAACATGTGGTACATGTATGATTGAGAGGTTGTAGTATGTG
TTTGAAAGGTATTCTATGTTGTTATTGCTCTTATGCTCGTTGTCTGTATAGTTTATGAAT
AAGTTCTTTCGATAAACGGTTGCTAAACGTATCTACATTTCTACTTCCATGGATGCAGCT
TGTCTATCTTCCAGACTGTTCGACCTATTCCAGGTAATATTATTTGTTCGTGTTCATTTG
AACAACTAGATTTGCATGTTATAGCATCAACGTCAGGATTTATTATATATGTATTCTGTT
GAGCTGTGTTTCTTTCATTTCAGAGCTCTTAATTGTTGGTTGTGGAAGGAACATTCACCC
CGTAACTCCCGAGGTCCGTCAGTTTGTGAAGTCTATTGGCATGAAGCTAGAAACCGTTGA
TTCTGTATGTTTTCTTCTAATCCCTTACAGCATTCTCTAGTCCCACACAAGCCTAATTCT
TATATTGATTACTTGATTCAGAGAAATGCTGCATCAACTTACAACATTCTGAATGAAGAA
GGAAGGGTTGTTGCTGCTGCATTGCTTCCATATGGAGTTGCATCTTAAAGAATTTTTTAA
AAAAGCTAGCAACTCGAGCTCGGTCTGTACAACTGTAGATGAATGTTGAGACTTTATCTC
TTGTGAAAATAAACCGAAACACATCGGATTTTTCTTGCTTCTCGAGGTTAATAACAGACG
TTGTAACAAACATGAACCTTTTCATTGCATTTCTCACCTTTCTATATATCTCGGAGTTTG
CTTATGTGATGACTTTTATGGCGCAATAGGTCTAACACAATGAAAGAAATGTCCACAACC
TTTTTAAAATATAATTCCTTCGTTTCAAAATGATTCATGTTTTCCAAAAAAATGTTTCAA
AAAATACATTTTTATAATTCTGTAAACTTTGAAAACGTTAAATGCGTATTAAATTTTTAT
TGGCGAAAGATAGTTAAATTTATAATTAAATTTAATGTTTTACTAATGTGTGAATTTTTT
TAAACATTAACCATTTTGAAACGAAAGGAATAAATGATGTTAACATGGGATTCAGACAAT
ACTAATATAAAGCACATTTCGAGATATTTAAAATTATTTTATTGTATCAAGCCACAAAGT
TACATATTTTCCACATTAAATCTATGTAAACTATCACAACCTATGACTTTTACTATGATA
CATAACAAAAGAGAGAAAGATCAAGCAACGGCGGCCAAAACACCAACAAATGGAGCAACT
GTGACGGTCACAGGCTCACTTTGCTGAAAATTAGTCCTCGCATCTCCATAAGCATCGTTC
GCGTCGGGTCCTCCCACAAGTGCTCCGGTTAGTACGTTAGGGTTTGGTGCAGGATTGTTA
TACCAATTGTTCATTCCGTCATTGCACGTCACGGCGGTGCTGTTCTGTTTGATCGACACT
ATAGAGGCTCCTCTATGGTGTGGACTCTTTGGATAGTTGGTTCCGAATCCAACCATGTAG
CTCATGCTCTTCGGGTTTGATCCAAGTATGTAGTCTACCTATATAAACCAATATTATCAT
GTGTAAATTGTTAGGCAATAAATATCGTTCGTGGTACTAGGCAATACCATAGTGTATAAT
ACGTTTTAGCTACCTGAGTA
Pro Sequence
MSIQDSNITSNSSTRRVSYEGSLLCVGNLLILSIFQTVRPIPELLIVGCG
RNIHPVTPEVRQFVKSIGMKLETVDSRNAASTYNILNEEGRVVAAALLPY
GVAS
mRNA Sequence
ATGTCCATCCAAGATTCCAACATCACCTCCAATAGTTCAACGAGACGAGTTTCATACGAAGGTAGCTTGC
TCTGTGTCGGGAACTTGCTTATCTTGTCTATCTTCCAGACTGTTCGACCTATTCCAGAGCTCTTAATTGT
TGGTTGTGGAAGGAACATTCACCCCGTAACTCCCGAGGTCCGTCAGTTTGTGAAGTCTATTGGCATGAAG
CTAGAAACCGTTGATTCTAGAAATGCTGCATCAACTTACAACATTCTGAATGAAGAAGGAAGGGTTGTTG
CTGCTGCATTGCTTCCATATGGAGTTGCATCTTAA