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Detail for ZS11_A05G08500.t1

Genome:
ZS11: ZS11_A05G08500.t1
ZS11_v0: BnaA05T0074200ZS
WE: WE_A05G08000.t1
WE_v0: BnaA05T0063100WE
Darmor: A05p07960.1_BnaDAR
BH: BnaA05T083700BH
Quinta: BnaA05T0070400QU
ZS2: BnaA05T077400ZS2
SW: BnaA05T073900SW
Express61: A05p007210.1_BnaEXP
Xiaoyun: BnaC04G0088000XY
P202: BnaC04G005890P202.2
BL: BnaA05T083700BH
TA: BnaC04T089100TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA05T080700RB
No2127: BnaC04T0085400NO
P130: BnaA05G006880P130.1
Length: 558
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1100.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_013748376.1
NR E-value: Not available
NR Score: 1101.3
NR Annotation: XP_013748376.1 laccase-4 [Brassica napus]
SwissProt Protein: O80434|LAC4_ARATH
SwissProt E-value: Not available
SwissProt Score: 1107.0
SwissProt Annotation: Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2
CDS Sequence (1700 bp)
ATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTTCTTGTCTGTGTTCCCAGCTCCATCGGAGA
GCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAACATTACTAGACTATGCTCAAGCAAGCCAAC
CGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAA
GTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCACGGTGTGAGACAAGTGAGAACGGGATGGG
CCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCAGGTCAAGTCTACACATACAACTACACCTT
GACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCCTGTGGCTTCGAGCCACGGTTCACGGCGCA
ATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTTATCGTTC
TAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTGGATTAGCCCCTAA
TGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATCTCAGGGTTACAAA
CTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAATGAAGAGCTCTTTT
TTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTGGACGCTGTCTACGTCAAACCGTTCAAGACCGA
CACCGTCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAAATCTGCCGGCAAATAC
CTTGTAACCGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGACAATGTTACCGCCACCGCCACTGTCC
ATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACTCTCCCTCCGCCGCAAAACGCTACTACCAT
CGCCAACAATTTTACAAACTCTCTTCGTAGTCTCAACTCTAAGAAGTACCCTGCCCTAGTCCCGACCACC
ATCGACCACCACCTATTTTTCACCGTCGGCCTCGGATTAAACCCGTGCCCCACTTGTAAGGCTGGGAACG
GAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACTATGCCCAAAACCGCTTTGCTTCCAGCTCA
TTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCAAGAACCCACCGCATGTTTTCAACTACAGC
GGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAGGCTTTACAAGCTACCTTACAACGCCACGG
TGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAGAACCATCCTATTCATCTACATGGCTTTAA
CTTTTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCAAGAAAGATCCAAGCAATTTCAATTTGGTC
GATCCGGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGGATGGGTTGTCATCAGATTCAGAGCGGATA
ATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAAAGATGGCTTTCTT
GGTGGAGAACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATCTTCCCAAGTGTTGA
Upstream Sequence
GTTGCCTCCTTCTCTCGTTTCTAAACTCTTTCTCCTCTCTCATTTATAAGCTTGCGTTGCCCAGTCGCTC
ATCTCAAACACAAAGACAAGAATATTAAATACACAGAAGAAGAAGAAGAGAAAGGACGAGAGAAACCGAG
GAGAGAGAGAGATATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTTCTTGTCTGTGTTCCCA
GCTCCATCGGAGAGCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAACATTACTAGACTATGCT
CAAGCAAGCCAACCGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACGCACGAGAAGACGACAC
GTTGCTCATCAAAGTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCACGGTGTGAGACAAGTG
AGAACGGGATGGGCCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCAGGTCAAGTCTACACAT
ACAACTACACCTTGACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCCTGTGGCTTCGAGCCAC
GGTTCACGGCGCAATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAG
AAAGTTATCGTTCTAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTG
GATTAGCCCCTAATGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATC
TCAGGGTTACAAACTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAAT
GAAGAGCTCTTTTTTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTGGACGCTGTCTACGTCAAAC
CGTTCAAGACCGACACCGTCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAAATC
TGCCGGCAAATACCTTGTAACCGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGACAATGTTACCGCC
ACCGCCACTGTCCATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACTCTCCCTCCGCCGCAAA
ACGCTACTACCATCGCCAACAATTTTACAAACTCTCTTCGTAGTCTCAACTCTAAGAAGTACCCTGCCCT
AGTCCCGACCACCATCGACCACCACCTATTTTTCACCGTCGGCCTCGGATTAAACCCGTGCCCCACTTGT
AAGGCTGGGAACGGAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACTATGCCCAAAACCGCTT
TGCTTCCAGCTCATTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCAAGAACCCACCGCATGT
TTTCAACTACAGCGGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAGGCTTTACAAGCTACCT
TACAACGCCACGGTGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAGAACCATCCTATTCATC
TACATGGCTTTAACTTTTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCAAGAAAGATCCAAGCAA
TTTCAATTTGGTCGATCCGGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGGATGGGTTGTCATCAGA
TTCAGAGCGGATAATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAA
AGATGGCTTTCTTGGTGGAGAACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATCTTCC
CAAGTGTTGATTCTTCAACTAAACAAGGCCACGTTTAAGAAGACCAGCGAGTGGTGAACCAATGCGTGGA
TTTGGTTAGCAAATTATATTTTTTGAGCAAAGTTAAAGGTTCGATTTTTTTGCTCAAGCAAAGTTTGAAT
AAAAGAGGAAGGAAAAGAAAAGAGATTGTATTACAACAATATTTTTTATCATTATATCCAACATCCATTT
ATATTATTATATCATTATTCTCTCCAACACAACTCTTatatgaccca
Downstream Sequence
CGTGAGTTTATATCTATCCATTTGCATAGATGTATATATACATACATATTATGTGTTCGT
GTACGTGCCATGCCGATCTCTTTCGCTACATAGGAAGTAGTCGCAAGATGTCCATATATA
TGCACACACACTACTGTAACTTATAAGCATAAGTTATATTTCGTACATGCTTACGTAGTG
ATATATATGGTTTATGGCTTCACATAATTAGAACATATATATGTAATTTGTACTGATGTC
AAAAAATAAAAGTAATTTATACTTCATATAGCATATTTATACCTAAATTTTCTTTGAATA
TATTTTTACTTCTTTTGAGCCTTTTACTGGCACACATTACCATTTTAAAGTTATGTACGT
CAGGTGTTTTCCCCCTTTTAAACATGACAATCATTTTATATAAAAGGGCTATATAATGTT
TTGACTTTTGACGTACATGTGAATGAAGTGAAGTATGATTTTATCTATTTTTGGTTACAA
CTTACAATCAGATAATGATTATAGTTATTGGTTTGCTTTTCTTTTATTTACCTTTTTCCC
TTTTGCCTAACTTTGCAATATAATTATTACTGATTATATTTGTGTTTGAAAATCACACAG
GTTGTGATGAAAAACATTACTAGACTATGCTCAAGCAAGCCAACCGTGACCGTGAACGGT
AGATATCCAGGTCCCACAATCTACGCACGAGAAGACGACACGTTGCTCATCAAAGTCGTT
AATCACGTCAAGTACAACGTCTCCATCCACTGGTAACCTCCTACTTAATCTTCAAATGAA
TCATCATTGGTAAGTTTATTAGTTAATTGATTGGTGACTGTGGACGACCGAGAACAGGCA
CGGTGTGAGACAAGTGAGAACGGGATGGGCCGATGGGCCAGCTTACATCACCCAGTGCCC
ACTCCAGCCAGGTCAAGTCTACACATACAACTACACCTTGACCGGCCAACGCGGGACTCT
CTGGTGGCACGCTCACATCCTGTGGCTTCGAGCCACGGTTCACGGCGCAATTGTTATCCT
CCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAGAAAGTTATCGTTCT
AGGTAGATTAATCATTCTATTTTAGAAAGTTCGGATATATTGAATCTAATTCTCATGTGG
CTTGCACTTCATCGTGTTAATTAAAAACCTATAAAGCTGAATGCGGTTATCTTATGTGGC
AATGAATATATGTTAATTTGGCATGGCTAACTAATGCTCATCATAATGGCAGCTGAATGG
TGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTGGATTAGCCCCTAAT
GTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATCTCAG
GGTAATTAATTTCTTAGTTACCTTTATAAATTTTTATAGTAATACTAATAGTTGCCAAAA
AGCTGATTATGAAACCCTCATTCTGCTCTCGAAGGTTACAAACTGTCAGTAACAAATGGC
AAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAATGAAGAGCTCTTTTTTAAAGTC
GCTGGCCATCTTTTCACGGTGGTGGAAGTGGACGCTGTCTACGTCAAACCGTTCAAGACC
GACACCGTCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAAATCT
GCCGGCAAATACCTTGTAACCGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGACAAT
GTTACCGCCACCGCCACTGTCCATTACTCCGGAACACTATCCTCCTCCCCAACAACACTC
ACTCTCCCTCCGCCGCAAAACGCTACTACCATCGCCAACAATTTTACAAACTCTCTTCGT
AGTCTCAACTCTAAGAAGTACCCTGCCCTAGTCCCGACCACCATCGACCACCACCTATTT
TTCACCGTCGGCCTCGGATTAAACCCGTGCCCCACTTGTAAGGCTGGGAACGGAAGCCGT
GTGGTGGCCAGCATCAACAA
Pro Sequence
MKSHMVWFLFLVSFLSVFPAPSESMVRHYKFNVVMKNITRLCSSKPTVTV
NGRYPGPTIYAREDDTLLIKVVNHVKYNVSIHWHGVRQVRTGWADGPAYI
TQCPLQPGQVYTYNYTLTGQRGTLWWHAHILWLRATVHGAIVILPKRGVP
YPFPKPDHEKVIVLAEWWKSDTENVINEALKSGLAPNVSDAHMINGHSGP
VNNCPSQGYKLSVTNGKTYLLRLVNAALNEELFFKVAGHLFTVVEVDAVY
VKPFKTDTVLIAPGQTTNVLLTTSKSAGKYLVTASPFMDSPIAVDNVTAT
ATVHYSGTLSSSPTTLTLPPPQNATTIANNFTNSLRSLNSKKYPALVPTT
IDHHLFFTVGLGLNPCPTCKAGNGSRVVASINNVTFTMPKTALLPAHYFN
ISGVFTTDFPKNPPHVFNYSGGSVTNMATETGTRLYKLPYNATVQLVLQD
TGVIAPENHPIHLHGFNFFEVGRGLGNFNAKKDPSNFNLVDPVERNTIGV
PSGGWVVIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVENGKGPNQSILP
PPKDLPKC
mRNA Sequence
GTTGCCTCCTTCTCTCGTTTCTAAACTCTTTCTCCTCTCTCATTTATAAGCTTGCGTTGCCCAGTCGCTC
ATCTCAAACACAAAGACAAGAATATTAAATACACAGAAGAAGAAGAAGAGAAAGGACGAGAGAAACCGAG
GAGAGAGAGAGATATGAAGTCTCATATGGTTTGGTTTCTGTTTCTTGTGTCCTTCTTGTCTGTGTTCCCA
GCTCCATCGGAGAGCATGGTTCGCCATTACAAATTTAACGTTGTGATGAAAAACATTACTAGACTATGCT
CAAGCAAGCCAACCGTGACCGTGAACGGTAGATATCCAGGTCCCACAATCTACGCACGAGAAGACGACAC
GTTGCTCATCAAAGTCGTTAATCACGTCAAGTACAACGTCTCCATCCACTGGCACGGTGTGAGACAAGTG
AGAACGGGATGGGCCGATGGGCCAGCTTACATCACCCAGTGCCCACTCCAGCCAGGTCAAGTCTACACAT
ACAACTACACCTTGACCGGCCAACGCGGGACTCTCTGGTGGCACGCTCACATCCTGTGGCTTCGAGCCAC
GGTTCACGGCGCAATTGTTATCCTCCCCAAACGTGGTGTTCCCTATCCGTTCCCCAAACCCGACCACGAG
AAAGTTATCGTTCTAGCTGAATGGTGGAAATCAGATACTGAAAACGTTATTAACGAGGCGCTTAAGTCTG
GATTAGCCCCTAATGTCTCTGACGCTCACATGATCAACGGACACTCTGGCCCCGTAAATAATTGTCCATC
TCAGGGTTACAAACTGTCAGTAACAAATGGCAAAACCTATCTGCTACGACTAGTCAATGCTGCACTTAAT
GAAGAGCTCTTTTTTAAAGTCGCTGGCCATCTTTTCACGGTGGTGGAAGTGGACGCTGTCTACGTCAAAC
CGTTCAAGACCGACACCGTCCTTATAGCACCCGGTCAAACCACCAACGTCCTCCTAACCACCTCAAAATC
TGCCGGCAAATACCTTGTAACCGCTTCTCCCTTCATGGACTCCCCCATCGCGGTGGACAATGTTACCGCC
ACCGCCACTGTCCATTACTCCGGAACACTATCCTCCTCCCCAACAACACTCACTCTCCCTCCGCCGCAAA
ACGCTACTACCATCGCCAACAATTTTACAAACTCTCTTCGTAGTCTCAACTCTAAGAAGTACCCTGCCCT
AGTCCCGACCACCATCGACCACCACCTATTTTTCACCGTCGGCCTCGGATTAAACCCGTGCCCCACTTGT
AAGGCTGGGAACGGAAGCCGTGTGGTGGCCAGCATCAACAATGTAACATTCACTATGCCCAAAACCGCTT
TGCTTCCAGCTCATTACTTTAACATTAGCGGCGTTTTCACGACGGATTTTCCCAAGAACCCACCGCATGT
TTTCAACTACAGCGGAGGATCAGTCACGAACATGGCCACGGAAACAGGGACGAGGCTTTACAAGCTACCT
TACAACGCCACGGTGCAGCTTGTTCTCCAGGATACCGGCGTCATAGCCCCAGAGAACCATCCTATTCATC
TACATGGCTTTAACTTTTTTGAAGTTGGTCGTGGATTAGGTAACTTCAACGCCAAGAAAGATCCAAGCAA
TTTCAATTTGGTCGATCCGGTTGAGAGGAACACAATCGGAGTTCCATCTGGTGGATGGGTTGTCATCAGA
TTCAGAGCGGATAATCCCGGGGTTTGGTTCATGCATTGTCACTTGGAGGTACACACGACGTGGGGATTAA
AGATGGCTTTCTTGGTGGAGAACGGCAAAGGACCCAATCAGTCGATTTTGCCACCGCCTAAGGATCTTCC
CAAGTGTTGATTCTTCAACTAAACAAGGCCACGTTTAAGAAGACCAGCGAGTGGTGAACCAATGCGTGGA
TTTGGTTAGCAAATTATATTTTTTGAGCAAAGTTAAAGGTTCGATTTTTTTGCTCAAGCAAAGTTTGAAT
AAAAGAGGAAGGAAAAGAAAAGAGATTGTATTACAACAATATTTTTTATCATTATATCCAACATCCATTT
ATATTATTATATCATTATTCTCTCCAACACAACTCTTatatgaccca