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Detail for ZS11_A05G12560.t1

Genome:
ZS11: ZS11_A05G12560.t1
ZS11_v0: BnaC09T0158700ZS
WE: WE_C09G19190.t1
WE_v0: BnaA05T0166700WE
Darmor: C09p18240.1_BnaDAR
BH: BnaA09T206500BH
Quinta: BnaC09T0158000QU
ZS2: BnaA05T173200ZS2
SW: BnaA09T202200SW
Express61: A09p015130.1_BnaEXP
Xiaoyun: BnaA05G0108900XY
P202: BnaC09G022910P202.1
BL: BnaA09T206500BH
TA: BnaA09T162400TA
Da-Ae: Not available
RB: BnaA09T172300RB
No2127: BnaA09T0105100NO
P130: BnaC03G086320P130.1
Length: 157
KOG ID: KOG1223
KOG E-value: 2.610000e-15
KOG Score: 73.6
KOG Annotation: Amino acid transport and metabolism
Biological Process: -
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: CDY53438.1
NR E-value: 9.800000e-67
NR Score: 258.1
NR Annotation: CDY53438.1 BnaC03g77990D [Brassica napus]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: 1.450000e-15
SwissProt Score: 75.9
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (480 bp)
ATGATGCTGCACGAACGGAGTTCTCAAGAAGAGTCGTTGTATTCAACAGGGCTAAGTTTCTTCACTCCAG
AGATGATATCAGATCTTCGTTATCTGATAGGTCCTAGAGGTGAGGAGGGGTCATCATCAAACCAGGAGAC
ATCCAGAGAAACACAGGCAGTGGACGGAGGTGGACCAATGTCCTCCTTGCCGTTAACGTTATGTAATGTA
ATGTATATTGCACAAGTTGCATCCAATGGTAGAGTGCTGACATGGGGAGCCAAGGTTACGTATAGGGAGT
CTCTAGGATTATATGTTCTTAGCAAGAATTATGTTCCCACAAAAGGATCGCATTACACTGCTGTAAAGAA
GGCTTTGGAGATGATTAAGCAAAATATTTCATCCCTTAGTAAGAGTGAAGGGCATGATGCTTATCACTTC
TCTCTGCAACTAACTGGTGCACCAGCTCTTATCGGGAACACGATATGTATATAA
Upstream Sequence
ATGATGCTGCACGAACGGAGTTCTCAAGAAGAGTCGTTGTATTCAACAGGGCTAAGTTTCTTCACTCCAG
AGATGATATCAGATCTTCGTTATCTGATAGGTCCTAGAGGTGAGGAGGGGTCATCATCAAACCAGGAGAC
ATCCAGAGAAACACAGGCAGTGGACGGAGGTGGACCAATGTCCTCCTTGCCGTTAACGTTATGTAATGTA
ATGTATATTGCACAAGTTGCATCCAATGGTAGAGTGCTGACATGGGGAGCCAAGGTTACGTATAGGGAGT
CTCTAGGATTATATGTTCTTAGCAAGAATTATGTTCCCACAAAAGGATCGCATTACACTGCTGTAAAGAA
GGCTTTGGAGATGATTAAGCAAAATATTTCATCCCTTAGTAAGAGTGAAGGGCATGATGCTTATCACTTC
TCTCTGCAACTAACTGGTGCACCAGCTCTTATCGGGAACACGATATGTATATAA
Downstream Sequence
GTATGTTTCTTTAGTGGATGAGAGAGTAGGATAGGTCCTAGAGGTGAGGAGGGGTCATCA
TCAAACCAGGAGACATCCAGAGAAACACAGGCAGTGGACGGAGGTGGACCAATGTCCTCC
TTGCCGTTAACGTTATGTAATGTGTTTAGTTCTTCTCTCTGTTACATGTAACAATAGATC
ATGTCTTTTGGTTTGAGATGTTGCATTAGATAAATGCTTTAGGCTTATGGGTTTCATTCT
TGTGTCATGATAGAATGTATATTGCACAAGTTGCATCCAATGGTAGAGTGCTGACATGGG
GAGCCAAGGTATCATATTCAGAGACTTGATTAAATACAAGAGGGAAACAGTTTGATATCT
GAATATCTCTGTTCCATTTCTCTTAAGTCTATCTCCAATGAATTTTTTTGGTTCTTACGA
TAAGCCAACTCATCTAATAGCTTTTACAGATAAAACGTTTTTTGTTCTCTTCTCACCGCT
TGCTCGAAACAGGTATGTTAATTATTTTTTTTGGTCCTGTGGAATTTCAGGGCTTTGTTT
TTTTTTTTAATAAGTTACATTGTTTAGATTAAGAGTTTTGAAtttaatgagtttggtgga
agctcaacgttggctgcaactcttacttgggacaataaactgtcttggacgctgaagaat
actactgaagaactttaagagactaCTAGATTTTGATCCAAGCGCGGGTTTGTTTTTGTA
ATTAAATATATTTTAAACGAATTTTTATATAAGATAGTGTATAAGTTTTAGCACATTTAT
CCGAAATCACGGATCAAACCGTACCAAACTGATCAACCAAAACTGaactgaattgcaaat
cgtatatctatgactgaaaaattgaaactgaaccgagaaccaaatgagtacctgaatttt
taaataaaaattatatatttaaaaatattaattgcattcaattttaaATAACCAAATATC
CTAAAACTACTATTTATAAACCGGATAACACGAAAACTTTAATTACCCGAATATTTTTAT
TTGGTTGATAAATAATTTAGTTACAAAAGTATAATTTATCTGTTTATTATGTGTACGGAA
GCATTGGTCGCAAATATTAAAAAGGCAGAACGAAATAAGCAACTAACGGGTCTAAAGGTT
GCTAGGGCCTGCCCCCCAATTTCCCATTTATTATTTGCAGACGATAGCCTTTTCTTTTGC
AAAGCTCAGAAGGAAGAATGTCAGACAATTCTTAGGATTCTCAAGGAATATGAAGGGGCT
TCAGGACAACAAATAAATTTTGAAAAATCTTCGATTCAATTTGGACACAAGATTGCAGAG
GCTACACGACAGGAAGTTCGAGATATCTTAGGTATACATAATTTAGGAGGAATGGGGTCT
TATTTGGGCATCCCAGAAAATCTGGGAGGATCAAAGGTGCAAGTTTTTGGATTTGTTCAG
GAGCGTCTAAATAGCAGAGTAAATGGTTGGACTTTTAAGTTTTTCACCAGAGGGGGTAAG
GAAGTGATTATAAAATCTGTGATTACAGCCTTACCAAACAGTGTGATGTCATGCTTTCGA
ATTCCCAAAACGGTAATGAAGAAATTAGTTAGTGCTGTAGCACAATTCTGGTGAAGTCCA
GGGGGTAACAAGAGAGGTATGCATTGGAAATCATGGGACAAACTGTGTAGCTCTAAGGAC
GATGGAGGTTTGGGATTCAAAGATCTCACAGATTTTAATACAGCTATGCTTGGGAAACAA
TTTTGGAGATTAATGGACAAACCGAATACTTTATTTTCTCGTGTATTCAAAGGGAGATAT
TTCAGGAATGCTTCACCCCTGGAACCCATTAGATCATACTCGTCATCTTATGGTTGGCGT
AGTATTGTCTCTGCTAGATCTCTGGTTAGCAAAGGACTAATCAAAAGGGTGGGAACAGGA
TCATCTATATCAGTATGGAATGATCCTTGGCTTCCATCCACTCGCCCGAGACCAGCAAAT
AAAAATCAACACAATCTTTA
Pro Sequence
MMLHERSSQEESLYSTGLSFFTPEMISDLRYLIGPRGEEGSSSNQETSRE
TQAVDGGGPMSSLPLTLCNVMYIAQVASNGRVLTWGAKVTYRESLGLYVL
SKNYVPTKGSHYTAVKKALEMIKQNISSLSKSEGHDAYHFSLQLTGAPAL
IGNTICI
mRNA Sequence
ATGATGCTGCACGAACGGAGTTCTCAAGAAGAGTCGTTGTATTCAACAGGGCTAAGTTTCTTCACTCCAG
AGATGATATCAGATCTTCGTTATCTGATAGGTCCTAGAGGTGAGGAGGGGTCATCATCAAACCAGGAGAC
ATCCAGAGAAACACAGGCAGTGGACGGAGGTGGACCAATGTCCTCCTTGCCGTTAACGTTATGTAATGTA
ATGTATATTGCACAAGTTGCATCCAATGGTAGAGTGCTGACATGGGGAGCCAAGGTTACGTATAGGGAGT
CTCTAGGATTATATGTTCTTAGCAAGAATTATGTTCCCACAAAAGGATCGCATTACACTGCTGTAAAGAA
GGCTTTGGAGATGATTAAGCAAAATATTTCATCCCTTAGTAAGAGTGAAGGGCATGATGCTTATCACTTC
TCTCTGCAACTAACTGGTGCACCAGCTCTTATCGGGAACACGATATGTATATAA