SEARCH

DETAIL

Detail for ZS11_A05G31870.t1

Genome:
ZS11: ZS11_A05G31870.t1
ZS11_v0: BnaA05T0369100ZS
WE: WE_A05G31900.t1
WE_v0: BnaC05T0385500WE
Darmor: A05p30570.1_BnaDAR
BH: BnaA05T284200BH
Quinta: BnaC03T0415300QU
ZS2: BnaA05T253800ZS2
SW: BnaA05T271000SW
Express61: A05p024660.1_BnaEXP
Xiaoyun: BnaA05G0273600XY
P202: BnaA05G022800P202.1
BL: BnaA05T284200BH
TA: BnaA05T255800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g28920D
RB: BnaA05T279400RB
No2127: BnaA05T0286000NO
P130: BnaA05G026330P130.1
Length: 349
KOG ID: KOG0143
KOG E-value: Not available
KOG Score: 669.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism; General function prediction only
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013749347.1
NR E-value: 1.600000e-210
NR Score: 736.9
NR Annotation: XP_013749347.1 flavonol synthase/flavanone 3-hydroxylase [Brassica napus]
SwissProt Protein: Q9SRM3|DIOX6_ARATH
SwissProt E-value: 6.830000e-59
SwissProt Score: 198.0
SwissProt Annotation: Probable 2-oxoglutarate-dependent dioxygenase At3g111800 OS=Arabidopsis thaliana OX=3702 GN=At3g11180 PE=2 SV=1
CDS Sequence (1064 bp)
ATGGAGGATCTTGATCAAACTTTCATCCAAGCACCAGAGCATAGAGCAGATTCCAACTCCATCCCTAACC
AACCCGAAGAAATACCCGTGATCGATCTCTCACGTCTCAACGACCCTGAAGATATCCAAAACGTGATCTC
GGAGATTGGTGATGCATGTGAAACATGGGGATTTTTCCAGGTGATCAATCATGGTGTGCCTTGCGACGCA
AGGAAGCGCGTGGAGGAGACGGTGAAGATATTTTTCGATTTGCCTATGGAAGAGAAGATCAAAGTAAAGA
GAGACGAGGTGAATCCAGCAGGGTATCATGATGGAGAACACACGAAGAACGTTAGAGATTGGAAAGAAGT
GTTTGATATTTATTTCAAAGATCCAATGGTTATGCCTTCTTCCACAGATCCTGAAGATGAAGGTTTAAGA
GTTGTTTACAACAAGTGGCCTCAGTTTCCttctgattacagGGAGGCATGTCAGGAATATGCAGGCCACG
CTGAAAAACTAGCGTTCAGACTCTTAGAACTCATCTCATTAAGCTTAGGCTTACCAAAAGAGCGTTTTCA
TGATTACTTCAAAGAACAAATGAGTTTTTTCAGGATAAATCGTTATCCACCATGTCCACGGCCTGACCTA
GCTCTAGGTGTAGGCCACCACAAAGACGCAGATGTTATAAGTCTATTGGCTCAAGACGACGTTGGAGGGC
TACAAATTAGTCGCAGATCGGACGGTGTTTGGTTTCCTATTAGACCCGTTCCTAATGCTCTTGTCATCAA
TATTGGCAATTGTATGGAGGTATGGACAAATGATAAGTATTGGAGTGCAGAACATAGAGTGGTGGTGAAC
TCAACAAGGGAAAGATACTCAATACCGTTCTTCTTGTTGCCTTCACATGATGTGGAAGTGAAACCATTAG
AAGAGCTTCTGAGTCCTGAAAACCCTCCAAGATACAAAGGATATAAATATGGCAAGTTTTATGTCAGCAG
AAACAGAAGCGATTTTAAAAAACTTGAGATCCAAAACATTCAGATCGATGACTTTAAAGTTGTAACTTAG
Upstream Sequence
GGTATATAGTTAGCTACATTCCATCCAAATAGGCAAAACATAGCAACTCTCTTGACTTGCCCAAAACTTC
TTTACTTTTAACAAATGGAGGATCTTGATCAAACTTTCATCCAAGCACCAGAGCATAGAGCAGATTCCAA
CTCCATCCCTAACCAACCCGAAGAAATACCCGTGATCGATCTCTCACGTCTCAACGACCCTGAAGATATC
CAAAACGTGATCTCGGAGATTGGTGATGCATGTGAAACATGGGGATTTTTCCAGGTGATCAATCATGGTG
TGCCTTGCGACGCAAGGAAGCGCGTGGAGGAGACGGTGAAGATATTTTTCGATTTGCCTATGGAAGAGAA
GATCAAAGTAAAGAGAGACGAGGTGAATCCAGCAGGGTATCATGATGGAGAACACACGAAGAACGTTAGA
GATTGGAAAGAAGTGTTTGATATTTATTTCAAAGATCCAATGGTTATGCCTTCTTCCACAGATCCTGAAG
ATGAAGGTTTAAGAGTTGTTTACAACAAGTGGCCTCAGTTTCCttctgattacagGGAGGCATGTCAGGA
ATATGCAGGCCACGCTGAAAAACTAGCGTTCAGACTCTTAGAACTCATCTCATTAAGCTTAGGCTTACCA
AAAGAGCGTTTTCATGATTACTTCAAAGAACAAATGAGTTTTTTCAGGATAAATCGTTATCCACCATGTC
CACGGCCTGACCTAGCTCTAGGTGTAGGCCACCACAAAGACGCAGATGTTATAAGTCTATTGGCTCAAGA
CGACGTTGGAGGGCTACAAATTAGTCGCAGATCGGACGGTGTTTGGTTTCCTATTAGACCCGTTCCTAAT
GCTCTTGTCATCAATATTGGCAATTGTATGGAGGTATGGACAAATGATAAGTATTGGAGTGCAGAACATA
GAGTGGTGGTGAACTCAACAAGGGAAAGATACTCAATACCGTTCTTCTTGTTGCCTTCACATGATGTGGA
AGTGAAACCATTAGAAGAGCTTCTGAGTCCTGAAAACCCTCCAAGATACAAAGGATATAAATATGGCAAG
TTTTATGTCAGCAGAAACAGAAGCGATTTTAAAAAACTTGAGATCCAAAACATTCAGATCGATGACTTTA
AAGTTGTAACTTAGTATTACTGGTACTATGTGTGAATTTGTTTTATGAAGCTGTGATCTTATAATGTAAG
CCCTTAATGTAATAATGTGTGTGAGACTTGAGTCTTGTCAGAAACAATAAATTTGATAATGTTTAATGAA
AGTTTGTGAGGT
Downstream Sequence
gtaagttattttaaatacataaagttgtgattatgagagataacacaaacgtaatccggt
taagatattatatatatttttttatttttattctaatagttgaccttaaacatGAAATTT
TTCTTTAAATGATGAACTTTGTACTAAAATTTATTTATCAAATTATAGGATCAGTCTAAC
ATATATACACATTATAATTTTCTTTTAATTTTGTGACAAAGTTACTTTGGTTTCTTTCTT
ATTCTTGATTTATTATTCTCTATTTTCGAGTAAAAATACAAACTTCAAAAAATACAAACT
TGAAATCCCAATATGATCAGAAACTTCATCACTTTTCCACAACTCTATTGAAGGCACGTG
AACTCGCTATCTTCCAACGCTGCATATGTGATAAGTTACAACTTACACGTAGGACATATC
AAACAAAAATTTGGTGAAAAAAACTTCTTTTTCAACGGTGTAAGCTAATCTCTTTTCTCT
TTTTTTTGTTTGTCTAATTTGATTCTAGGGAGGCATGTCAGGAATATGCAGGCCACGCTG
AAAAACTAGCGTTCAGACTCTTAGAACTCATCTCATTAAGCTTAGGCTTACCAAAAGAGC
GTTTTCATGATTACTTCAAAGAACAAATGAGTTTTTTCAGGATAAATCGTTATCCACCAT
GTCCACGGCCTGACCTAGCTCTAGGTGTAGGCCACCACAAAGACGCAGATGTTATAAGTC
TATTGGCTCAAGACGACGTTGGAGGGCTACAAATTAGTCGCAGATCGGACGGTGTTTGGT
TTCCTATTAGACCCGTTCCTAATGCTCTTGTCATCAATATTGGCAATTGTATGGAGGTAA
AATTTTTCATATTATATCTCAttttaaaatatataaatttaaatatcgaattgtaatgac
tatataTACTATTAGGTATGGACAAATGATAAGTATTGGAGTGCAGAACATAGAGTGGTG
GTGAACTCAACAAGGGAAAGATACTCAATACCGTTCTTCTTGTTGCCTTCACATGATGTG
GAAGTGAAACCATTAGAAGAGCTTCTGAGTCCTGAAAACCCTCCAAGATACAAAGGATAT
AAATATGGCAAGTTTTATGTCAGCAGAAACAGAAGCGATTTTAAAAAACTTGAGATCCAA
AACATTCAGATCGATGACTTTAAAGTTGTAACTTAGTATTACTGGTACTATGTGTGAATT
TGTTTTATGAAGCTGTGATCTTATAATGTAAGCCCTTAATGTAATAATGTGTGTGAGACT
TGAGTCTTGTCAGAAACAATAAATTTGATAATGTTTAATGAAAGTTTGTGAGGTTTTGGT
GACAACCCAAATTAGCAGTGAGAAACTGACGCTTTCTTAATTTCATGTAATGACAGACAG
AAATAAGAAAACAACATAAGGTAGTTGACATGGTGGGTAGCCCAATAAAATTGATAGGTT
AAAACTTTAAAACTTCGAAGTTTTAACCTAAAAATATGATGTACGTACCAACTTTTCTTT
ATTAACCAATTAAACTACATATGCCATTTTGTGTGTTCGGTGAGATTGAGTTTATGTCGG
AAACTAATCCATACTAATAAAAGGGACCTTTTGAGGCTCCATAATAAAAGGGACCTTTTG
AGGCTCCATAGAGCGTCCACATCAGCGAAAAAAATTCTCCCGAAAGATGACACGTGGCAT
AAAATATAGTTTTACATTTTAATATTACTTATTTTCAAAAATTGTAAAAAATATGTAAAC
ATACAGAATAAAAAAATGGAAAAACTACATTAAACATATCTAAAATTACTATTTTTCACT
TAAAAAAAGACGGCTTATctccataatgtaacattcccgttttataaaaaaaacaaaaaa
aattatATATAATTTCGAAAATAATAAATATATGTAAAACATACAACATAAAAATGGAAA
TACTACATTAAACATATGTAAGATTACCATTTTACATTTAAAAATAACAATAATATGTAA
ACATACAACATAAAAAAAAT
Pro Sequence
MEDLDQTFIQAPEHRADSNSIPNQPEEIPVIDLSRLNDPEDIQNVISEIG
DACETWGFFQVINHGVPCDARKRVEETVKIFFDLPMEEKIKVKRDEVNPA
GYHDGEHTKNVRDWKEVFDIYFKDPMVMPSSTDPEDEGLRVVYNKWPQFP
SDYREACQEYAGHAEKLAFRLLELISLSLGLPKERFHDYFKEQMSFFRIN
RYPPCPRPDLALGVGHHKDADVISLLAQDDVGGLQISRRSDGVWFPIRPV
PNALVINIGNCMEVWTNDKYWSAEHRVVVNSTRERYSIPFFLLPSHDVEV
KPLEELLSPENPPRYKGYKYGKFYVSRNRSDFKKLEIQNIQIDDFKVVT
mRNA Sequence
GGTATATAGTTAGCTACATTCCATCCAAATAGGCAAAACATAGCAACTCTCTTGACTTGCCCAAAACTTC
TTTACTTTTAACAAATGGAGGATCTTGATCAAACTTTCATCCAAGCACCAGAGCATAGAGCAGATTCCAA
CTCCATCCCTAACCAACCCGAAGAAATACCCGTGATCGATCTCTCACGTCTCAACGACCCTGAAGATATC
CAAAACGTGATCTCGGAGATTGGTGATGCATGTGAAACATGGGGATTTTTCCAGGTGATCAATCATGGTG
TGCCTTGCGACGCAAGGAAGCGCGTGGAGGAGACGGTGAAGATATTTTTCGATTTGCCTATGGAAGAGAA
GATCAAAGTAAAGAGAGACGAGGTGAATCCAGCAGGGTATCATGATGGAGAACACACGAAGAACGTTAGA
GATTGGAAAGAAGTGTTTGATATTTATTTCAAAGATCCAATGGTTATGCCTTCTTCCACAGATCCTGAAG
ATGAAGGTTTAAGAGTTGTTTACAACAAGTGGCCTCAGTTTCCttctgattacagGGAGGCATGTCAGGA
ATATGCAGGCCACGCTGAAAAACTAGCGTTCAGACTCTTAGAACTCATCTCATTAAGCTTAGGCTTACCA
AAAGAGCGTTTTCATGATTACTTCAAAGAACAAATGAGTTTTTTCAGGATAAATCGTTATCCACCATGTC
CACGGCCTGACCTAGCTCTAGGTGTAGGCCACCACAAAGACGCAGATGTTATAAGTCTATTGGCTCAAGA
CGACGTTGGAGGGCTACAAATTAGTCGCAGATCGGACGGTGTTTGGTTTCCTATTAGACCCGTTCCTAAT
GCTCTTGTCATCAATATTGGCAATTGTATGGAGGTATGGACAAATGATAAGTATTGGAGTGCAGAACATA
GAGTGGTGGTGAACTCAACAAGGGAAAGATACTCAATACCGTTCTTCTTGTTGCCTTCACATGATGTGGA
AGTGAAACCATTAGAAGAGCTTCTGAGTCCTGAAAACCCTCCAAGATACAAAGGATATAAATATGGCAAG
TTTTATGTCAGCAGAAACAGAAGCGATTTTAAAAAACTTGAGATCCAAAACATTCAGATCGATGACTTTA
AAGTTGTAACTTAGTATTACTGGTACTATGTGTGAATTTGTTTTATGAAGCTGTGATCTTATAATGTAAG
CCCTTAATGTAATAATGTGTGTGAGACTTGAGTCTTGTCAGAAACAATAAATTTGATAATGTTTAATGAA
AGTTTGTGAGGT