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Detail for ZS11_A05G46380.t1

Genome:
ZS11: ZS11_A05G46380.t1
ZS11_v0: BnaC05T0548400ZS
WE: WE_A05G46050.t1
WE_v0: BnaA05T0438500WE
Darmor: A05p44110.1_BnaDAR
BH: BnaC05T589600BH
Quinta: BnaC05T0496000QU
ZS2: BnaA05T382700ZS2
SW: BnaC05T490600SW
Express61: A05p034990.1_BnaEXP
Xiaoyun: BnaA05G0400500XY
P202: BnaC01G081890P202.1
BL: BnaC05T589600BH
TA: BnaC05T542200TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g38720D
RB: BnaC05T584200RB
No2127: BnaA05T0401500NO
P130: BnaC05G064900P130.1
Length: 112
KOG ID: KOG3456
KOG E-value: 1.100000e-71
KOG Score: 210.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03939 NDUFS6; NADH dehydrogenase (ubiquinone) Fe-S protein 6
NR Protein: XP_009130328.1
NR E-value: 6.300000e-60
NR Score: 235.0
NR Annotation: XP_009130328.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial [Brassica rapa]
SwissProt Protein: Q9M9M6|NDUS6_ARATH
SwissProt E-value: 4.650000e-71
SwissProt Score: 210.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g03070 PE=1 SV=1
CDS Sequence (343 bp)
ATGGCGTCGAATCTCCTGAAAGCTCTGATCCGATCGCAGATTCTTCCATCTTCGAGGAGGAACTTTAGCG
TAGCGGCGGCTAGCACTCAGCTCGACATTCCAACAAACGATTTAGTCGGAAACCACACCGCCAAATGGAT
GCAGGATAGAAGCAAGAAGTCGCCAATGGAACTGATCCATGAGGTTCCACCTATCAAGGTTGTTGGAAGA
ACTGCTGCTTGTGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACCTAC
ACGAGCCTGCTGTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAA
Upstream Sequence
CTCGCTAGCTATTTTTCTCTTGAGGATTATTTTTCTGGTTGGGTGTTGAAGGAGCGAAAATGGCGTCGAA
TCTCCTGAAAGCTCTGATCCGATCGCAGATTCTTCCATCTTCGAGGAGGAACTTTAGCGTAGCGGCGGCT
AGCACTCAGCTCGACATTCCAACAAACGATTTAGTCGGAAACCACACCGCCAAATGGATGCAGGATAGAA
GCAAGAAGTCGCCAATGGAACTGATCCATGAGGTTCCACCTATCAAGGTTGTTGGAAGAACTGCTGCTTG
TGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACCTACACGAGCCTGCT
GTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAAATGCAATTTTCGCAAGTGAAAC
ATCTCTCCCCTCTCATCTCTCTCTTCCTTTTTATTGCATTGTCAAGTTTGTGTATTGCTTCTATGAGGCT
CCGACATCTTGATATATCATTTCTAATAAAGGATTCTATCACATTAGTGCAAGTGCGACTTTATTTGATC
GCATTTGTCAGATTGTAACATCCAATATTTGATACTCTTTTCCATGACAAGGC
Downstream Sequence
GGTAACTTATAGATCTTTCTTTCTCATCCTAAATGATTGTCGATGATGAGCTCCCCAATA
GTTAGATCTAGATATGACATGTTTAGGATTTTCTCATCTGGTATTGGTACTGGATTCGTT
TTTGCTTAAACTGCTTCACGGTTTTCTGGATTCGTGAAACTTAGTGTGATGTTTAAAATA
AATGTTTTCATGCTTCCTTTTTACTCAACAGTTTTCGTATGTAAGGAACTTAAACTGTAA
CACAGGATAGAAGCAAGAAGTCGCCAATGGAACTGATCCATGAGGTTCCACCTATCAAGG
TTGTTGGAAGAACTGCTGCTTGTGAAGGAGGTTCGTTCGTCTCCTCTTCTCAACACTGCT
TTAAGATACTCTTTAACGTTGTGATTTTTACTCAACTGGAGACTGATATATTAGTATAAC
GTATAACGTGCAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGAC
CTACACGAGCCTGCTGTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCAC
TAAATGCAATTTTCGCAAGTGAAACATCTCTCCCCTCTCATCTCTCTCTTCCTTTTTATT
GCATTGTCAAGTTTGTGTATTGCTTCTATGAGGCTCCGACATCTTGATATATCATTTCTA
ATAAAGGATTCTATCACATTAGTGCAAGTGCGACTTTATTTGATCGCATTTGTCAGATTG
TAACATCCAATATTTGATACTCTTTTCCATGACAAGGCTTGTGGATTTCTTACATAACCA
GTGTCGAGTAATGGTCTTTTTGCCGTAAAGAATCTCGTTTTTATTTTAAttatAGTATGG
ACTTTGCCAAGAGCAAATAATTTAACGCAGTAAGAGTACAAAAACTCTCCTTAACCAAAA
AGGACTAACAGTAGGATTCAAATCTCCTCCTCTAAACAATGTTGTGATGGTGAAACCACT
TGATCAGAGCTTATACCGTATGTAAAATCTCATTCCGTATCTGTTCCAGCCAGTTTTCTT
CTCTGCTGATGCTCTGCAACTTTGTAATCCACAACCTCTCTGAACAGCACAGAGTCCAAC
ACACAGTCTTCACTTCCATAAACAGCTGCTTGAACACTCGCCATCAGCTTCGCAATCTCT
CTCCCTGAGAACCCATCGGTTTTGGCAGCCGCTTCCTCTAAAAGCTCTTCGGTGACACCC
TTTATCTCGATCTTCTGCTGCTCTTTCTTGAAGAGGCGGTCGAATAAACCTGGCTTTGTC
GGACCAGCTTGAGCTATGTACTTTTCTAGATATAGGCTTAGAAGCTTGGACCGCTCTCCT
TCTCCGGGTAAAGGGAATTCGAGAACCTCATCCACACGGTCAGCCACAGCTGAGTCTAGG
TCACCTGGTCGATTTGTGGCAAGTGCTAAGACTATGTCTTTGGACTGATCACCCGTGCGG
AAGAGAAGGGCGTTTAGTGCACTCCTTTGAGCTTCACTCATGTATGTTTTGTTCCTCCTG
TTAAATTGTGATAAAACACATTATGAACAAAGTGTTGAAATGACCAGCATGTAATATGAT
TTGAGTAACAAGACTTACTCGCATAAAAATGCATCGGCTTCATCAATGAAGAGCAATAAG
ACACTGTTAGActtcttccccaatcaaacagttggtgaatctttgtaacagcctgagatc
caagggtgcaacatctccaccagtcatcagtgcataatccaatccctacacgaattataa
acgttacaataacaaaaaaaGATGAAATAACAAAACCAGACAACACCATGAACAACATAT
AACTAAGAGCTAAACTTCAAATTTCATATGCAATCATGAAAATTAGCAACCACCATCCTA
TATGCTTGAGACTCCACTGTCCATTTGGGTGTCTTAAATAACAATTTTTGCAATAATAAA
CAGATATTAAAGAGAATACATACAGATTTACGAGCCAGCTCTCTGGCGACCATTGTTTTT
CCTGTTCCCGGAGGACCATA
Pro Sequence
MASNLLKALIRSQILPSSRRNFSVAAASTQLDIPTNDLVGNHTAKWMQDR
SKKSPMELIHEVPPIKVVGRTAACEGDTNPALGHPIEFICLDLHEPAVCK
YCGLRYVQDHHH
mRNA Sequence
CTCGCTAGCTATTTTTCTCTTGAGGATTATTTTTCTGGTTGGGTGTTGAAGGAGCGAAAATGGCGTCGAA
TCTCCTGAAAGCTCTGATCCGATCGCAGATTCTTCCATCTTCGAGGAGGAACTTTAGCGTAGCGGCGGCT
AGCACTCAGCTCGACATTCCAACAAACGATTTAGTCGGAAACCACACCGCCAAATGGATGCAGGATAGAA
GCAAGAAGTCGCCAATGGAACTGATCCATGAGGTTCCACCTATCAAGGTTGTTGGAAGAACTGCTGCTTG
TGAAGGAGACACCAATCCAGCACTCGGTCATCCAATTGAGTTCATTTGCCTCGACCTACACGAGCCTGCT
GTCTGCAAGTACTGTGGCCTTCGTTATGTTCAAGATCATCATCACTAAATGCAATTTTCGCAAGTGAAAC
ATCTCTCCCCTCTCATCTCTCTCTTCCTTTTTATTGCATTGTCAAGTTTGTGTATTGCTTCTATGAGGCT
CCGACATCTTGATATATCATTTCTAATAAAGGATTCTATCACATTAGTGCAAGTGCGACTTTATTTGATC
GCATTTGTCAGATTGTAACATCCAATATTTGATACTCTTTTCCATGACAAGGC