SEARCH

DETAIL

Detail for ZS11_A06G09200.t1

Genome:
ZS11: ZS11_A06G09200.t1
ZS11_v0: BnaA06T0081900ZS
WE: WE_A06G09520.t1
WE_v0: BnaA06T0080400WE
Darmor: A06p09090.1_BnaDAR
BH: BnaA06T093200BH
Quinta: BnaA06T0079600QU
ZS2: BnaA07T253000ZS2
SW: BnaA06T092800SW
Express61: C06p037140.1_BnaEXP
Xiaoyun: BnaA07G0250200XY
P202: BnaA06G007390P202.1
BL: BnaA06T093200BH
TA: BnaC06T406200TA
Da-Ae: Not available
RB: BnaC06T423800RB
No2127: BnaC06T0401000NO
P130: BnaA06G008210P130.1
Length: 155
KOG ID: KOG1223
KOG E-value: 1.370000e-59
KOG Score: 193.0
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013592783.1
NR E-value: 1.300000e-47
NR Score: 194.5
NR Annotation: XP_013592783.1 PREDICTED: isochorismate synthase 1, chloroplastic isoform X1 [Brassica oleracea var. oleracea]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: 1.730000e-58
SwissProt Score: 193.0
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (474 bp)
ATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCGCTAGGAGTACATGTTCTTAGCAAAA
ATCATGTTCTTACAAAAGGAGTGTATTACCCTGCTGTAGAGAAGGCCTTGGAGATGATTAAACATAAAAG
TTCATCTCTTAGCAAGGGTGTGTTTGCTCGCAACAGCAGGATTATAATGGATTCTGACATTAATCCCATT
GCTTGGCTTGCAAAGTTACAGAGTGAAGGGCATGATCCTTATCAATTATGTCTGCAACCGCCTGGTGCAT
CAGCTTTTATTGGGAACACGATATGGTGTCTTCATGAAGCTTTGGCTGCAGCTAGGCCTCGAGCTGCTTC
AACTGCGCGTGATATGGAGATAGAGTGTGGCTTACTAATCGTTCTATATGAGACAAAAAACTGTGAGGAA
GCTTGCAAGATTGCATCACCTATATTCTCAATTGGTGGGGAAGGTTAG
Upstream Sequence
ATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCGCTAGGAGTACATGTTCTTAGCAAAA
ATCATGTTCTTACAAAAGGAGTGTATTACCCTGCTGTAGAGAAGGCCTTGGAGATGATTAAACATAAAAG
TTCATCTCTTAGCAAGGGTGTGTTTGCTCGCAACAGCAGGATTATAATGGATTCTGACATTAATCCCATT
GCTTGGCTTGCAAAGTTACAGAGTGAAGGGCATGATCCTTATCAATTATGTCTGCAACCGCCTGGTGCAT
CAGCTTTTATTGGGAACACGATATGGTGTCTTCATGAAGCTTTGGCTGCAGCTAGGCCTCGAGCTGCTTC
AACTGCGCGTGATATGGAGATAGAGTGTGGCTTACTAATCGTTCTATATGAGACAAAAAACTGTGAGGAA
GCTTGCAAGATTGCATCACCTATATTCTCAATTGGTGGGGAAGGTTAG
Downstream Sequence
GGTAAACATAGAACAAATTCTGCTTTTAAATTATTGAATGGTCTTTACACTAACGAGAAC
TTTGTTGTGTTAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCGCTAGGAGTACA
TGTTCTTAGCAAAAATCATGTTCTTACAAAAGGAGTGTATTACCCTGCTGTAGAGAAGGC
CTTGGAGATGATTAAACATAAAAGTTCATCTCTTAGCAAGGTAGTTTAGTGACCAATGTC
TGTATCTATCTTGCAATGTTATGTTTTCTAGCTTAACTGATGTTTTGTGTTTGCAAAAAT
AGGGTGTGTTTGCTCGCAACAGCAGGATTATAATGGATTCTGACATTAATCCCATTGCTT
GGCTTGCAAAGTTACAGGTGTGTTTTTTGGTCTAAGGATACTATATTCACTTTTTAGAAT
AAAGTAAGGTTAGGACTTGAATCTCACTCGAGTTATTGTTTGACAGAGTGAAGGGCATGA
TCCTTATCAATTATGTCTGCAACCGCCTGGTGCATCAGCTTTTATTGGGAACACGATATG
GTATATCAGTAGTCTTTTTGTGCATTCTGTTTGATCCACATATCTGGAAGAAATTGCTGT
TAAAGATATGTGCATTTTGTTTGACACGCATCTTTGTGAAACAGCTTGAAAGACTTTTTG
AAAGGAATCAGTTAGGTGTCTTCATGAAGCTTTGGCTGCAGCTAGGCCTCGAGCTGCTTC
AACTGCGCGTGATATGGAGATAGAGTGTGGCTTACTAATCGTGTGAGTTTTTAATTCTTT
TGAACAATCACACAATCGATTTTTTCGTTGAAATTTGCCGCAGCCCCAAAAAAAACCTTG
AGTTCTTTTGTACGAGAGAATGTAAGAGAAAAGTTAAACTTAAGATCAATCTTATTGCTC
TTCATCTTTCAAACCTTTTGTCTACAATTAATTTGTATTTTGACACTTTAAGAAGTGTAT
TGACACATGTTCTATTACCATATTTCTTCCTTTCAGTCTATATGAGACAAAAAACTGTGA
GGAAGCTTGCAAGATTGCATCACCTATATTCTCAATTGGTGGGGAAGGTTAGGAGAGAAG
ATGACAAGCTAAGATAAAATAGTATTTAAATTTTACAACAACTGAGCACCTAGATAGCTT
GAAGTTAAGGGTTGTGAATATTATCTCGAAGCTTTTTGTCTTCACATTGTTTTAACTCTT
TCATGTTTTTATCAGCAGTTTGACATCTAGACTGCTCTGTATCCAACTCCAGCTGTTTGT
GTGCTTCCAGCATAAGAAGCCAGACTTTTGATTAAGGAAATAGGTGAAATATTAGCTGTT
TGTAATGTTTTTTATTTATATTTTGAGAATTGTTATTTTTCTTCTACTGATGTACTCTTG
ATAATTGAATTGTCATTTAGCATTTGTTATGATCAATATATGACCGGATGAATATATCTT
TATAGATTATATATATATATATATATATTAATATCAAAAACCTTAAATGGGACATTGTTT
AAATGGTTACATTGAAACATTGATTTACAAAACACATCGGAATAAACTGAAAAGAAACAA
AGAAAATCCTTGAGAGTGAGGCATAGATCATCTCCAACCAATATAGTGCATGCAACTAAA
TGGGAGACCAATAATGAATCACACAGAATACGTTAAAAGCTCGATATAGAAACAGTGAGG
CTCACTACGTCCGAGGGATACAAAACTATTTTCGTAATAACAACACATATAAGGCTTACA
ACATCTACACATGTACAACAATTGAAGTGTATAACAATAACATTTATGAATACGGCATAA
TGATATATTCAGTCATGCATAGTTCGAACATGTTTGGGTGGAGAATAAGCATAATCAAAA
TGAACCAATGCTATAGACTCCCATCCACATGCTGCTACTACCGAAATAGATATCACTCCA
CGAGGTTAAGGTAACAAGACTATCAGTTTACATTGTAACTTATTTGAATGTCAAAGCTAC
AATTACATGGCATCCCTACA
Pro Sequence
MLQVSSVVMRLRRESLGVHVLSKNHVLTKGVYYPAVEKALEMIKHKSSSL
SKGVFARNSRIIMDSDINPIAWLAKLQSEGHDPYQLCLQPPGASAFIGNT
IWCLHEALAAARPRAASTARDMEIECGLLIVLYETKNCEEACKIASPIFS
IGGEG
mRNA Sequence
ATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCGCTAGGAGTACATGTTCTTAGCAAAA
ATCATGTTCTTACAAAAGGAGTGTATTACCCTGCTGTAGAGAAGGCCTTGGAGATGATTAAACATAAAAG
TTCATCTCTTAGCAAGGGTGTGTTTGCTCGCAACAGCAGGATTATAATGGATTCTGACATTAATCCCATT
GCTTGGCTTGCAAAGTTACAGAGTGAAGGGCATGATCCTTATCAATTATGTCTGCAACCGCCTGGTGCAT
CAGCTTTTATTGGGAACACGATATGGTGTCTTCATGAAGCTTTGGCTGCAGCTAGGCCTCGAGCTGCTTC
AACTGCGCGTGATATGGAGATAGAGTGTGGCTTACTAATCGTTCTATATGAGACAAAAAACTGTGAGGAA
GCTTGCAAGATTGCATCACCTATATTCTCAATTGGTGGGGAAGGTTAG