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Detail for ZS11_A06G12840.t1

Genome:
ZS11: ZS11_A06G12840.t1
ZS11_v0: BnaC06T0446200ZS
WE: WE_A06G13120.t1
WE_v0: BnaA06T0111600WE
Darmor: A06p12670.1_BnaDAR
BH: BnaA06T126600BH
Quinta: BnaA06T0111000QU
ZS2: BnaA06T123600ZS2
SW: BnaA06T126800SW
Express61: C06p040560.1_BnaEXP
Xiaoyun: BnaA06G0119700XY
P202: BnaA06G009930P202.1
BL: BnaA06T126600BH
TA: BnaA06T125800TA
Da-Ae: Not available
RB: BnaC05T143400RB
No2127: BnaA06T0112700NO
P130: BnaA06G011100P130.1
Length: 222
KOG ID: KOG3256
KOG E-value: 4.950000e-161
KOG Score: 445.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0016020(membrane)
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H),GO:0051539(4 iron, 4 sulfur cluster binding)
KEGG Ortholog: K03941 NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2]
NR Protein: XP_013641627.1
NR E-value: 2.800000e-99
NR Score: 366.7
NR Annotation: XP_013641627.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial [Brassica napus]
SwissProt Protein: Q9FX83|NDS8B_ARATH
SwissProt E-value: 2.100000e-160
SwissProt Score: 445.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g16700 PE=1 SV=1
CDS Sequence (678 bp)
ATGGCTTCATTGCTAGCTCGCAGGTCGTTCAATGCTCTCCGCGCCCGACATCTCGTTTTTTCGGGGCAAG
CTTTACAGGGACCTCATCTCTCTGCGCTACAATCCCGTGCTATATCGTATGGCACTAACAAAGATGATGA
AGAAGCTGAGAAACTTGCTAAGGAGATCTCCAAGGACTGGAGCACTGTCTTTGAGCGGAGCATGAACACC
CTATTTCTCACTGAAATGGTCCGGGGTTTGTCTCTGACCCTCAAGTACTTCTTTGATCCAAAAGTTACTA
TCAATTATCCTTTTGAAAAGGGTCCATTGAGCCCTCGCTTCCGTGGTGAGCACGCTCTTCGAAGGTATCC
AACTGGGGAAGAACGCTGCATTGCTTGTAAACTCTGTGAAGCTGTATGTCCAGCTCAAGCAATCACCATA
GAGGCAGAGGAGAGGGAAGATGGAAGCCGCAGAACCACTAGGTATGATATCGACATGACAAAGTGCATCT
ACTGTGGTTTCTGCCAAGAAGCTTGCCCTGTTGATGCAATCGTCGAAGGACCCAACTTTGAGTTTGCAAC
CGAGACCCATGAGGAACTTTTGTATGACAAAGAGAAACTTCTTGAGAATGGAGATCGGTGGGAGACAGAG
ATTGCCGAGAATCTGAAGTCGGAGAGCCTCTACCGCTGA
Upstream Sequence
TTGTCTTCTTCGTGTCCATGCCCTTGTCCTTGTGAGAGAGATCGAACTTTCTCGGGTTTATTTGTGTATC
ATCGTGTTCAAGGTTAGCGTGTAATACCAGTGAAAGTGATATTTGGAGCTCCATCAATGGCTTCATTGCT
AGCTCGCAGGTCGTTCAATGCTCTCCGCGCCCGACATCTCGTTTTTTCGGGGCAAGCTTTACAGGGACCT
CATCTCTCTGCGCTACAATCCCGTGCTATATCGTATGGCACTAACAAAGATGATGAAGAAGCTGAGAAAC
TTGCTAAGGAGATCTCCAAGGACTGGAGCACTGTCTTTGAGCGGAGCATGAACACCCTATTTCTCACTGA
AATGGTCCGGGGTTTGTCTCTGACCCTCAAGTACTTCTTTGATCCAAAAGTTACTATCAATTATCCTTTT
GAAAAGGGTCCATTGAGCCCTCGCTTCCGTGGTGAGCACGCTCTTCGAAGGTATCCAACTGGGGAAGAAC
GCTGCATTGCTTGTAAACTCTGTGAAGCTGTATGTCCAGCTCAAGCAATCACCATAGAGGCAGAGGAGAG
GGAAGATGGAAGCCGCAGAACCACTAGGTATGATATCGACATGACAAAGTGCATCTACTGTGGTTTCTGC
CAAGAAGCTTGCCCTGTTGATGCAATCGTCGAAGGACCCAACTTTGAGTTTGCAACCGAGACCCATGAGG
AACTTTTGTATGACAAAGAGAAACTTCTTGAGAATGGAGATCGGTGGGAGACAGAGATTGCCGAGAATCT
GAAGTCGGAGAGCCTCTACCGCTGAATGTTTCCGAAGGTCTTTCGCCTGATTTATTGGTTTGAATAAAGA
TACTGATGTGAAAACTGGGGTTGGTTTTGTTTACGGTTTAAATTGGACCATAAATACCATACCGAACACT
TTGGAATATGAAGTTATGATTACATGGAGTTGTTACTCTCTCTAGCCTAG
Downstream Sequence
GTATGACTCTTTTTTTTTTTTTTTGCATTTTATGTCCTGAGTGTTGCTATCCATTCCAAT
CTGCATCTTTTGGTCTATAGATTGGTGGAAATTGGAATTTGTAATTTAACACCAATTGGA
ACTGGCTACAGATTTTAAAGATTTAGTTTATTGTTATTGTTGATTATCATCAGGAGGCTA
TATTATTCTATATGTCGTTACTCTTCCTTTAAGATAGAATGGGTGGTGTTGGTGGTAATG
TTTTAGCTCAATCTCTGCAAGTACATGTCCTTTAAGTGAGAGCAACCTTTGTTATAGTTA
ACTTTTAGGTTCTTTAGCTTCTTCTGCTGGGTTATGATAATGATGAGATTCTTCTTGTAT
AGGTTTTTTCGGGGCAAGCTTTACAGGGACCTCATCTCTCTGCGCTACAATCCCGTGCTA
TATCGTATGGCACTAACAAAGGTATATATATATTTCTTCTCTTGTTTCAGGCATATATGA
TTAGACTAATTAATGGTTTGCCTTTATAACTTGCAGATGATGAAGAAGCTGAGAAACTTG
CTAAGGAGATCTCCAAGGACTGGAGCACTGGTAAGCTATTTGATCCACGCACACTTTTCT
ACCTTTCTATGAGTATTGACGGTTCTTAATTTTACAGTCTTTGAGCGGAGCATGAACACC
CTATTTCTCACTGAAATGGTCCGGGGTTTGTCTCTGACCCTCAAGTACTTCTTTGATCCA
AAAGTTACTGTGAGTGACAGTCTTCCCTGACTTTAGTTATTAGGTTGAAAGAAGAAACAT
TTTGTGAATTCTGAAGTTTTTGTCCTGTATGCAGATCAATTATCCTTTTGAAAAGGGTCC
ATTGAGCCCTCGCTTCCGTGGTGAGCACGCTCTTCGAAGGTATCCAACTGGGGAAGAACG
CTGCATTGCTTGTAAACTCTGTGAAGCTGTAAGTTTTTAAAAGTCTTATGTTACTCGTAC
CATAGCATCACAATTCACCTGAAATTTGAGGGATACTGGGTTTTTTTTTCCTTTTCATCA
GGTATGTCCAGCTCAAGCAATCACCATAGAGGCAGAGGAGAGGGAAGATGGAAGCCGCAG
AACCACTAGGTCTCCACTTAAGCTCCCATTCATTAACCATATGCTTTCTTCTAGATACCA
TCTTGTCTCTCTGGTTATGTACATTTCATAGTGTAAGTGTAGTGATGGTTTGGAGCTGTA
CACAGGTATGATATCGACATGACAAAGTGCATCTACTGTGGTTTCTGCCAAGAAGCTTGC
CCTGTTGATGCAATCGTCGAAGGACCCAACTTTGAGTTTGCAACCGAGACCCATGAGGTA
AACACTAGAATAGATAGAGACATACCATTTGTCCATGATCCTAAAGTTAAGATGGTGTAT
CTGATTCTTCTTTTTTATGAAAACGCTGCAGGAACTTTTGTATGACAAAGAGAAACTTCT
TGAGAATGGAGATCGGTGGGAGACAGAGATTGCCGAGAATCTGAAGTCGGAGAGCCTCTA
CCGCTGAATGTTTCCGAAGGTCTTTCGCCTGATTTATTGGTTTGAATAAAGATACTGATG
TGAAAACTGGGGTTGGTTTTGTTTACGGTTTAAATTGGACCATAAATACCATACCGAACA
CTTTGGAATATGAAGTTATGATTACATGGAGTTGTTACTCTCTCTAGCCTAGTGTAAAGT
ACTGCTGTAAAGTAGCTGAAGAAAAGAAACAGAGACAGTCACGACTTCTAAAATCAGCAA
AGATGGCTCTTGTTTCTGTTTCAAGCTGTGTTGAACCTCGGTGTTTGTATGTTCGTAGTC
GTCCTCCCACAAAGGGCATTTATTAGCCACTATAAAAAAAAACTGCAAGGAGGCCAGTCA
CGACCTGCCTTGAGGAACAAGCTAATGTACGTGTCCTTGCCGGTTTGAAAATCGAAAGCA
GTAGTACTACAATGGACAAAGCTCTAGTAGTATCAAATGGTGCTAATTGGGTGGGTGCCT
CTAACCCAAGTAAATTTGCT
Pro Sequence
MASLLARRSFNALRARHLVFSGQALQGPHLSALQSRAISYGTNKDDEEAE
KLAKEISKDWSTVFERSMNTLFLTEMVRGLSLTLKYFFDPKVTINYPFEK
GPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITIEAEEREDGSR
RTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL
LENGDRWETEIAENLKSESLYR
mRNA Sequence
TTGTCTTCTTCGTGTCCATGCCCTTGTCCTTGTGAGAGAGATCGAACTTTCTCGGGTTTATTTGTGTATC
ATCGTGTTCAAGGTTAGCGTGTAATACCAGTGAAAGTGATATTTGGAGCTCCATCAATGGCTTCATTGCT
AGCTCGCAGGTCGTTCAATGCTCTCCGCGCCCGACATCTCGTTTTTTCGGGGCAAGCTTTACAGGGACCT
CATCTCTCTGCGCTACAATCCCGTGCTATATCGTATGGCACTAACAAAGATGATGAAGAAGCTGAGAAAC
TTGCTAAGGAGATCTCCAAGGACTGGAGCACTGTCTTTGAGCGGAGCATGAACACCCTATTTCTCACTGA
AATGGTCCGGGGTTTGTCTCTGACCCTCAAGTACTTCTTTGATCCAAAAGTTACTATCAATTATCCTTTT
GAAAAGGGTCCATTGAGCCCTCGCTTCCGTGGTGAGCACGCTCTTCGAAGGTATCCAACTGGGGAAGAAC
GCTGCATTGCTTGTAAACTCTGTGAAGCTGTATGTCCAGCTCAAGCAATCACCATAGAGGCAGAGGAGAG
GGAAGATGGAAGCCGCAGAACCACTAGGTATGATATCGACATGACAAAGTGCATCTACTGTGGTTTCTGC
CAAGAAGCTTGCCCTGTTGATGCAATCGTCGAAGGACCCAACTTTGAGTTTGCAACCGAGACCCATGAGG
AACTTTTGTATGACAAAGAGAAACTTCTTGAGAATGGAGATCGGTGGGAGACAGAGATTGCCGAGAATCT
GAAGTCGGAGAGCCTCTACCGCTGAATGTTTCCGAAGGTCTTTCGCCTGATTTATTGGTTTGAATAAAGA
TACTGATGTGAAAACTGGGGTTGGTTTTGTTTACGGTTTAAATTGGACCATAAATACCATACCGAACACT
TTGGAATATGAAGTTATGATTACATGGAGTTGTTACTCTCTCTAGCCTAG