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Detail for ZS11_A06G13420.t1

Genome:
ZS11: ZS11_A06G13420.t1
ZS11_v0: BnaA06T0119100ZS
WE: WE_A06G13750.t1
WE_v0: BnaA06T0117100WE
Darmor: A06p13310.1_BnaDAR
BH: BnaA06T132100BH
Quinta: BnaA06T0116400QU
ZS2: BnaA06T129800ZS2
SW: BnaA06T132100SW
Express61: A06p011910.1_BnaEXP
Xiaoyun: BnaA06G0125000XY
P202: BnaA07G028720P202.1
BL: BnaA06T132100BH
TA: BnaC05T145900TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g09670D
RB: BnaA06T131700RB
No2127: BnaC05T0138000NO
P130: BnaA06G011580P130.1
Length: 283
KOG ID: KOG2435
KOG E-value: 1.290000e-123
KOG Score: 352.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K18159 NDUFAF1, CIA30; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
NR Protein: XP_013641552.1
NR E-value: 3.900000e-122
NR Score: 443.0
NR Annotation: XP_013641552.1 probable complex I intermediate-associated protein 30 [Brassica napus]
SwissProt Protein: Q9LQI7|CIA30_ARATH
SwissProt E-value: 9.440000e-148
SwissProt Score: 416.0
SwissProt Annotation: Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana OX=3702 GN=At1g17350 PE=1 SV=2
CDS Sequence (864 bp)
ATGTCAAGGTTTCGATCATTGTTGCAAGCCTCAGTAAATGCAACGAAAAGGGCTTTTACGTGGAACATTG
AAGAATGGATACCACCTCCAGAGAAGTATATATTTAAGTTTCATTCGAAAGAAGACTTGAAGAAATGGCA
TCTCTATTCTGATTCTGAATATGGAGGATTATCTTCGGCTTCCTTGGAGATCCCAGATGGAGGAAAAGAA
TCAGATGGAACTGGAATTTTCTCGGGAAACCTTTCCGTAGACCTTAGTGAGGGATCAAAGTGGAACATCA
GTCGGAGTGGCTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGCTTCATTGATCTGGACGGGTATGATGC
AATAGCCATGAGGCTTAGAGGAGATGGAAGGTGTTATATATCTACCATCTATACCGAAAACTGGGTGAAT
TCACCAGGACAAACAGAAGATAACTCGTGGCAAGCTTTCGTCTTTGCTCCAAAGGACAGGTGGTATACTG
CCAAGATCCCTCTGGCTAGATACTTGCCAACATGGAGAGGAAATGTAATCGATGTGGAAATGGAGATGAA
TCCAGGTCGTGTTCTGGGTATGTCACTGTCGGTTAACGCAGAAGGTGGTGCGGTTGGAGCCAAGTCAGGA
GCAGACTGTTACGCGAAGGAAGAAATAAAAAAGGTGAAAGTTGTCCGAAAGGAAGCACTCTCTCTCTCTA
GAGCTTCACATTCTCTATCTACTAGAGATATAAAAAAGGGAAAGTTCTTCCTCAATTTGGGCAAGGAGAA
AGATTGCAAAACACCATTGTCCTCACGACAGGTTTCTCTGGGATTATATAATCTGTTGAAGGATACACAT
TTTGGTCTATAA
Upstream Sequence
ATGTCAAGGTTTCGATCATTGTTGCAAGCCTCAGTAAATGCAACGAAAAGGGCTTTTACGTGGAACATTG
AAGAATGGATACCACCTCCAGAGAAGTATATATTTAAGTTTCATTCGAAAGAAGACTTGAAGAAATGGCA
TCTCTATTCTGATTCTGAATATGGAGGATTATCTTCGGCTTCCTTGGAGATCCCAGATGGAGGAAAAGAA
TCAGATGGAACTGGAATTTTCTCGGGAAACCTTTCCGTAGACCTTAGTGAGGGATCAAAGTGGAACATCA
GTCGGAGTGGCTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGCTTCATTGATCTGGACGGGTATGATGC
AATAGCCATGAGGCTTAGAGGAGATGGAAGGTGTTATATATCTACCATCTATACCGAAAACTGGGTGAAT
TCACCAGGACAAACAGAAGATAACTCGTGGCAAGCTTTCGTCTTTGCTCCAAAGGACAGGTGGTATACTG
CCAAGATCCCTCTGGCTAGATACTTGCCAACATGGAGAGGAAATGTAATCGATGTGGAAATGGAGATGAA
TCCAGGTCGTGTTCTGGGTATGTCACTGTCGGTTAACGCAGAAGGTGGTGCGGTTGGAGCCAAGTCAGGA
GCAGACTGTTACGCGAAGGAAGAAATAAAAAAGGTGAAAGTTGTCCGAAAGGAAGCACTCTCTCTCTCTA
GAGCTTCACATTCTCTATCTACTAGAGATATAAAAAAGGGAAAGTTCTTCCTCAATTTGGGCAAGGAGAA
AGATTGCAAAACACCATTGTCCTCACGACAGGTTTCTCTGGGATTATATAATCTGTTGAAGGATACACAT
TTTGGTCTATAA
Downstream Sequence
GTATTCACTTTCCACCTTTCCGTCAATTAAAATATTCGTGATCTACTGATTTCCTGCTTG
TGTGTCGATGTTCTTGCTTTTGTTCAACTGTGTTTGTGCCTTTATTTAGACGGTGAATCA
TAGCAAGTAATGTTTGAGAAGCTGAATGGCGCTGTTTTTATGTTCCAAGATTTATCAACA
TTTTGTGATTACCATTATATCTTTCTACTAGCTTTAATGCTTTTGAATGCTAGTTTCTGA
CTTATCTTCACCACTTTTCAAACTGTTAGCTTTTACGTGGAACATTGAAGAATGGATACC
ACCTCCAGAGAAGTATATATTTAAGTTTCATTCGAAAGAAGACTTGAAGAAATGGCATCT
CTATTCTGATTCTGAATATGGAGGTACTTAATAAAGAGTGTCTGATATTGTTTTCTGTTG
TTGTTTCCCTTGCATTTCCATGCGTTGTTGATTTATATGGACAACTAACTACTGAGACAA
AATAAGATTCATAAAGATTTAGAATTAAATGATATCGTAAAGAATTCGTTATGAATTTTA
TAATTTATTTGGTGGCAACATGTTTGATGATTATTTTCACAGGATTATCTTCGGCTTCCT
TGGAGATCCCAGATGGAGGAAAAGAATCAGATGGAACTGGTTAGCAACTTCGTAACTCTT
TTTTTTTTTTGTGGACATGATTTTCGTTAACAAACATATGAGACGTTTCTATGTTACGGT
AGCGTTGTTTATGTCTTTATTATGTTTCTTACACTGCTCACTTGGTGATATTTTTCTCCC
TTATATCTTATATAGGAATTTTCTCGGGAAACCTTTCCGTAGACCTTAGTGAGGGATCAA
AGTGGAACATCAGTCGGAGTGGCTTCTGTGGAATGCGCTCAAAGAAGGTTAACAACGAAC
AGCTTTTATTTTACTTACAATGCAAATCTTAAGCAAACTCTAACTCTTACATTCAACTAT
TGTTTGAAGACAAGATTGAATTGTCATCTTGGTTTGTAACCCGAAGACTTTGCGAGTTAA
CTGATCATACTATTTCAACTAACTAACTTCCTTTTTTTTGTTTTGCAGTTTGATGGCTTC
ATTGATCTGGACGGGTATGATGCAATAGCCATGAGGCTTAGAGGAGATGGAAGGTGTTAT
ATATCTACCGTAAGTTTTCATGCTCATATTCACCTTTCCTATTACTCCAGATGAAACAAC
AAATGTTGTAGGAGGGAAAAGGGTTGTTATACTAAACCTTGATTTTGATTCAGATCTATA
CCGAAAACTGGGTGAATTCACCAGGACAAACAGAAGATAACTCGTGGCAAGCTTTCGTCT
TTGCTCCAAAGGACAGGTGGTATACTGCCAAGGCAAGTACTCACTTCTACAAATGTTACC
GATAAGGAGTTTTAGTGCATTGTACATATCCTGTTTTCTGAACTCCCAAAAAGACAGATA
GAGATTATGAGTTCACTTGAATGTTTCGCTTCTAGTCTAAGGCCATTAGTAACTGGAGTT
TTGATTATATATCAGATCCCTCTGGCTAGATACTTGCCAACATGGAGAGGAAATGTAATC
GATGTGGAAATGGAGATGAATCCAGGTCGTGTTCTGGGTATGTCACTGTCGGTTAACGCA
GAAGGTGGTGCGGTTGGAGCCAAGTCAGGAGCAGGTGATTTCAGAGTTGAAATTGACTGG
ATCAAAGCCTTGAGAATGCCATGAACGGGTGAAGCGTTATGGCAATGTATGATGTCTTTG
TTGCTTATTCTTTGTTTTAGCTTGTAAAAAACAGGCCTGAGTTGATACTTTGGTGGCCTT
GTTTAAGCTGGTCAACACTTTGAGCATGTTTTAACTATGTTCATCAAATAAAAAATACAT
GACACGAATCAAAAAGATATGATCATTATCTTATGTTTTGTAGTTTATCCGTTTTTGGTC
AACTTGTTAATACTTATTTATGGTCGTGATTGAATAAGAGAGAGTATGTTAAGTTACTAT
AATTGGTTGGTAAACAAAGA
Pro Sequence
MSRFRSLLQASVNATKRAFTWNIEEWIPPPEKYIFKFHSKEDLKKWHLYS
DSEYGGLSSASLEIPDGGKESDGTGIFSGNLSVDLSEGSKWNISRSGFCG
MRSKKFDGFIDLDGYDAIAMRLRGDGRCYISTIYTENWVNSPGQTEDNSW
QAFVFAPKDRWYTAKIPLARYLPTWRGNVIDVEMEMNPGRVLGMSLSVNA
EGGAVGAKSGADCYAKEEIKKVKVVRKEALSLSRASHSLSTRDIKKGKFF
LNLGKEKDCKTPLSSRQVSLGLYNLLKDTHFGL
mRNA Sequence
ATGTCAAGGTTTCGATCATTGTTGCAAGCCTCAGTAAATGCAACGAAAAGGGCTTTTACGTGGAACATTG
AAGAATGGATACCACCTCCAGAGAAGTATATATTTAAGTTTCATTCGAAAGAAGACTTGAAGAAATGGCA
TCTCTATTCTGATTCTGAATATGGAGGATTATCTTCGGCTTCCTTGGAGATCCCAGATGGAGGAAAAGAA
TCAGATGGAACTGGAATTTTCTCGGGAAACCTTTCCGTAGACCTTAGTGAGGGATCAAAGTGGAACATCA
GTCGGAGTGGCTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGCTTCATTGATCTGGACGGGTATGATGC
AATAGCCATGAGGCTTAGAGGAGATGGAAGGTGTTATATATCTACCATCTATACCGAAAACTGGGTGAAT
TCACCAGGACAAACAGAAGATAACTCGTGGCAAGCTTTCGTCTTTGCTCCAAAGGACAGGTGGTATACTG
CCAAGATCCCTCTGGCTAGATACTTGCCAACATGGAGAGGAAATGTAATCGATGTGGAAATGGAGATGAA
TCCAGGTCGTGTTCTGGGTATGTCACTGTCGGTTAACGCAGAAGGTGGTGCGGTTGGAGCCAAGTCAGGA
GCAGACTGTTACGCGAAGGAAGAAATAAAAAAGGTGAAAGTTGTCCGAAAGGAAGCACTCTCTCTCTCTA
GAGCTTCACATTCTCTATCTACTAGAGATATAAAAAAGGGAAAGTTCTTCCTCAATTTGGGCAAGGAGAA
AGATTGCAAAACACCATTGTCCTCACGACAGGTTTCTCTGGGATTATATAATCTGTTGAAGGATACACAT
TTTGGTCTATAA