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Detail for ZS11_A06G14710.t1

Genome:
ZS11: ZS11_A06G14710.t1
ZS11_v0: BnaA06T0129500ZS
WE: WE_A06G15240.t1
WE_v0: BnaA06T0127300WE
Darmor: A06p14840.1_BnaDAR
BH: BnaA06T143500BH
Quinta: BnaA06T0127100QU
ZS2: BnaA06T141400ZS2
SW: BnaA06T142000SW
Express61: Not available
Xiaoyun: BnaA06G0136000XY
P202: BnaA06G011310P202.1
BL: BnaA06T143500BH
TA: BnaA06T144400TA
Da-Ae: Not available
RB: BnaA06T143100RB
No2127: BnaA06T0128000NO
P130: BnaA06G012750P130.2
Length: 175
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009773(photosynthetic electron transport in photosystem I)
Cellular Component: GO:0009535(chloroplast thylakoid membrane),GO:0010598(NAD(P)H dehydrogenase complex (plastoquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_009149360.1
NR E-value: 7.700000e-97
NR Score: 358.2
NR Annotation: XP_009149360.1 PREDICTED: photosynthetic NDH subunit of subcomplex B 4, chloroplastic [Brassica rapa]
SwissProt Protein: Q8RXS1|PNSB4_ARATH
SwissProt E-value: 4.750000e-118
SwissProt Score: 334.0
SwissProt Annotation: Photosynthetic NDH subunit of subcomplex B 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB4 PE=2 SV=1
CDS Sequence (535 bp)
ATGGCCTCAGCATTCAAAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAGTTACTCGACTA
AGCAGATTTCAGGGCCAAATCATGGATGTTGGTTCTCTATGAAAAAGAATGAGAAGAGGGAAAAAGTTCT
GATGAGAGGAAGCTTGTGTGTAAGAAAGGCACTGCCACATGATTTGCCACTTATGGCTGTGATGGTTCAA
CAAATAGAGGGGATGCGTGATATTATTACAGAGAAACACGTGTGGCATCTAAGTGATAAAGCCATCAAGA
ATGTCTATTTGTTCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATT
CTATGACTCGGAGGAATACCGTGGAGATGGAGGTGATGGGACAGGATATTGGGTCTATGAAACTCAAGAA
GACATAGAAGAGAAGGCAAGAGCAGAGCTATGGCGTGAAGAGCTTATCGAAGAAATTGAACAGAAAGTTG
GTGGTTTAAGAGAGCTCGAAGAAGCTGTTAATAAGTAG
Upstream Sequence
ACCGATTCCCTTATCCACACATCTTCTGCCTCCAAAAATCTAATCTTAAAACTTAGAAATAAAAAAATAT
TGCAACAACATTGTCTCCTCTCGTTCCTCCGTTGCTGCCACTAATCAAAGAAGTATCAATGGCCTCAGCA
TTCAAAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAGTTACTCGACTAAGCAGATTTCAG
GGCCAAATCATGGATGTTGGTTCTCTATGAAAAAGAATGAGAAGAGGGAAAAAGTTCTGATGAGAGGAAG
CTTGTGTGTAAGAAAGGCACTGCCACATGATTTGCCACTTATGGCTGTGATGGTTCAACAAATAGAGGGG
ATGCGTGATATTATTACAGAGAAACACGTGTGGCATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGT
TCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGACTCGGA
GGAATACCGTGGAGATGGAGGTGATGGGACAGGATATTGGGTCTATGAAACTCAAGAAGACATAGAAGAG
AAGGCAAGAGCAGAGCTATGGCGTGAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAG
AGCTCGAAGAAGCTGTTAATAAGTAG
Downstream Sequence
GTATTAACTATTTTCATATACTAACTATATCATCATCTATAATAGAACATAAAGACTTGA
GTCTCGTGTTTGTAGACTAAGCAGATTTCAGGGCCAAATCATGGATGTTGGTTCTCTGTA
AGTAACTATCTTTAACTACGGATTTAATGAAGAATCTCATTATTTATTGCGGTATATGAA
TTTTACGTTTAAGAATTTTGAAAATTAGATGAAAAAGAATGAGAAGAGGGAAAAAGTTCT
GATGAGAGGAAGCTTGTGTGTAAGAAAGGCACTGCCACATGATTTGCCACTTATGGCTGT
GATGGTTCAACAAATAGAGGGGATGCGTGATATTATTACAGAGAAACACGTGTGGCATCT
AAGTGATAAAGCCATCAAGAATGTCTGTAAGTGCAAAAAAAATTTTAGTTATTCATTAAG
ACAACTAAAAATGTTTTGTCTTCAGTCTGGTTTTTGAATGTTTTGATATAATATTGGTGG
TCGTTTGATGTGGCAGATTTGTTCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTC
GGTTCCGCAAAAGTATGGGAAAAACTCAAATGAATCGAATCAATTCATCCCCATTTGCTT
CATTTGGGATCTTAGTTGTTTTTGATGAGTTATTTGTCAATAATGGTGTATGTATAGGAT
CCATTCTATGACTCGGAGGAATACCGTGGAGATGGAGGTGATGGGACAGGATATTGGGTC
TATGAAACTGTAAGTATCTTTCTTTCTAACTTTAGAAACATACAAATTATAACTTTGGGA
TGTTGTACTGACTAGCCCCACACTGGTCTTTATAGACCCTGACCTTGTGGACTAGGTTAG
GTCCGGCCCCTCCTTTATGTAGATGGCTTTAGGTTTGCCTTCAGATGTCATAATCTTAAG
CATCTGCGTACATTATGCTTGTTATGTATCTCCAGAACCTACTACAGACATGTTAATTAT
AAACTTCAAACACAAATGGAATGAAAAGGTTTAGTTTATGTTTAAAACTTATATCATTTG
ATGAAATACTGAAATTTATAAGAAAATGTGAACTCTGGTAACAACGAATTCAAACCTAAC
TGATTTGATGTAATTTGAGCAAAGATCGGGGTGGACCTGGGGACAATATTTTCTACAGAA
TCTTGTATAGTAAATTTAGGCCGCCGGTTCGGGACAGGTTGGGCTAAATTGGGCCATAGA
CTTAGTACATCACAATTTAATTACGCACAACTATTCTAAAATTGGAAAGAGTTGTTATTG
TGCTTTGGCTTCTATGATGCAGCAAGAAGACATAGAAGAGAAGGCAAGAGCAGAGCTATG
GCGTGAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAGAGCTCGAAGA
AGCTGTTAATAAGTAGACAACTAACATGTAAATCATACACAAATTATACATATACTTTTT
GTTTTCTGATAACAGTCATAACCCAGTCTTCATTTATATAATATAAGTTATCTGTTTAGT
GTTCTGGATCATTGAATGAGCATGTTAGGAGCAATCGTCTCCTTCAGATTTTTGTCTCAA
CTGGGGCTTAAATTAATTGGTCGCGTACGCTGGGCAGCGAGTCTCATGAGGAACCATTTG
CGGGAAATACGCTTTTGCACGATTTCACCTGTCCTTTAACTGAAAGAAAGTATACTAAAC
TAATCAAACTTGAAAAATAATAATCTGAAGAAGAAAGAGAGCTTGTCATGTCTTGGTCAA
TAATCTACGTGCTTTCATTTTACACAGCCTCTTCGACCTTGTGAGTTGTGAATCCCACGT
GTGGGTTTTTATTTGTTTATGTTTTTTCTTTCAATCTTCAGATATTTGTTTTTTTTTCAA
CTGGCTTTTTTTGGAACACACATGACAGAAGATCAGGGGATATTATGTAATAGATTTTTC
TCCTTTTTAATACTTTGATATCTGTATGGTAGTGTATATTGTCATGTATGAATTTAATTC
TTGTATGTTGTGCAATAATT
Pro Sequence
MASAFKSFTFTNLHIPSSSSYSTKQISGPNHGCWFSMKKNEKREKVLMRG
SLCVRKALPHDLPLMAVMVQQIEGMRDIITEKHVWHLSDKAIKNVYLFYI
MFTCWGCLYFGSAKDPFYDSEEYRGDGGDGTGYWVYETQEDIEEKARAEL
WREELIEEIEQKVGGLRELEEAVNK
mRNA Sequence
ACCGATTCCCTTATCCACACATCTTCTGCCTCCAAAAATCTAATCTTAAAACTTAGAAATAAAAAAATAT
TGCAACAACATTGTCTCCTCTCGTTCCTCCGTTGCTGCCACTAATCAAAGAAGTATCAATGGCCTCAGCA
TTCAAAAGTTTCACCTTCACAAACCTTCATATCCCTTCTTCCTCAAGTTACTCGACTAAGCAGATTTCAG
GGCCAAATCATGGATGTTGGTTCTCTATGAAAAAGAATGAGAAGAGGGAAAAAGTTCTGATGAGAGGAAG
CTTGTGTGTAAGAAAGGCACTGCCACATGATTTGCCACTTATGGCTGTGATGGTTCAACAAATAGAGGGG
ATGCGTGATATTATTACAGAGAAACACGTGTGGCATCTAAGTGATAAAGCCATCAAGAATGTCTATTTGT
TCTACATCATGTTCACTTGTTGGGGATGTCTGTACTTCGGTTCCGCAAAAGATCCATTCTATGACTCGGA
GGAATACCGTGGAGATGGAGGTGATGGGACAGGATATTGGGTCTATGAAACTCAAGAAGACATAGAAGAG
AAGGCAAGAGCAGAGCTATGGCGTGAAGAGCTTATCGAAGAAATTGAACAGAAAGTTGGTGGTTTAAGAG
AGCTCGAAGAAGCTGTTAATAAGTAG