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Detail for ZS11_A06G14880.t1

Genome:
ZS11: ZS11_A06G14880.t1
ZS11_v0: BnaA06T0131200ZS
WE: WE_A06G15400.t1
WE_v0: BnaA06T0128500WE
Darmor: A06p15100.1_BnaDAR
BH: BnaA06T145400BH
Quinta: BnaA06T0128400QU
ZS2: BnaA06T143300ZS2
SW: BnaA06T143800SW
Express61: A06p013240.1_BnaEXP
Xiaoyun: BnaA06G0137300XY
P202: BnaA06G011410P202.1
BL: BnaA06T145400BH
TA: BnaA06T146400TA
Da-Ae: Not available
RB: BnaA06T145000RB
No2127: BnaA06T0129100NO
P130: BnaA06G012880P130.2
Length: 563
KOG ID: KOG1223
KOG E-value: Not available
KOG Score: 913.0
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013724531.1
NR E-value: Not available
NR Score: 1110.5
NR Annotation: XP_013724531.1 isochorismate synthase 2, chloroplastic-like [Brassica napus]
SwissProt Protein: Q9M9V6|ICS2_ARATH
SwissProt E-value: Not available
SwissProt Score: 984.0
SwissProt Annotation: Isochorismate synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS2 PE=2 SV=2
CDS Sequence (1716 bp)
ATGGCATCGCTGCACTGTTCATCTTATTTTCTGGGCACAAATCTTACAAAACAAAACTCCGTTGCGATCT
TCCAAAGCTACTCTCCAACCTCATTCACCAAGCTTGCCTCTCGTGTCTCTCGCCAGAGGTTCCTACTCTG
CTCGCTGGCCATGAACGGGTGTGAGGCTGACCATAAAGAGCCACTTGGCACGGTAGAGACAAGAACTCTA
TCCACGGTTACGTCACCGGCTATTGCGACGGAGAAGCTGATAACCGCCGTCTCTAACCTTAAAACGGAAC
CGCCTTCGTTCTCATCCGGTATCATCCGATTACAGGTGCCCATTGACCAGACAATCGGTGCAATAGATTG
GCTTCATGCGCAAGATGGTGCTCTTCCTCGCAGTTTCTTTTCATGTCGTCGCAGCGACGCTGGCCGTCAA
GATCTTCTCCAAGACTTGGCGAGCGAGAATGTGAATGGATCATCTGATCGTAATCCGGTCAGTGTTGCTG
GAATCGGGTCTGCTGTATTTTTCCGTGATCTGAGCCCATTCTCTCATGATCACTGGAGATGTATCCGAAG
GTTTCTGTCTTCGACGTCTCCTTTGATTCGTGCGTACGGTGGACTTCGGTTTGATCCTAGAGGAAAGATC
GCTGTCGAATGGGAACAGTTTGGCTCTTTTTATTTCACAGTGCCTCAGGTCGAGTTTGCTGAGTTTGGGG
AAAACTCAGTGCTGGCTGCAACTGTTGCTTGGGACGAGGAGATCTCATGGACGCTTGAAAATGCTATTGA
AGCACTTCAGGAGACTATGCTTCAGGTTTCTTCTGGAATAATGAGATTACGGAGAGAATCTTTAGGAGTT
TCTGTTGTTAGCAAGAACCACGTTCCTAGTGAAGGAGCCTATTACCCTGCTGTAGCTAGTGCTCTGGAGA
TTATAAAGGCCAAAAATTCACCCCTAAGCAAGGTTGTGCTTGCACGCAGCACTAGAATCATTACTGATAC
CAATATTGATCCTATTGCTTGGTTAGCACGGTTGCAGCGTGAAGGACAAGACGCGTATCAATTCTGTCTT
CAGCCACCAGGTGCACCTGCATTCATAGGAAACACGCCTGAGAGGCTCTTCCACAGAAAACATCTAGGTG
TCTGCAGCGAGGCTTTGGCTGCAACTAGGCCTAGAGGTGATTCAGCAGTTTCTGATATGGAAATAGAGCG
TGACTTACTAACCAGTCCTAAAGACGATCTTGAGTTCTCCATCGTGCGAGAGAATATAAGAGAAAAACTA
AAAGCTATATGTGACAGAGTAATTGTGAGGCCCCCAAAAACAGTGAGAAAGCTTGCAAGAGTACAACACC
TTTATTCACAATTGGCAGGGCAGCTAAGAAGAGAAGATGATGAGTTTGACATCTTAACTGCTTTGCATCC
AACGCCAGCTGTTTGTGGATGTCCAGTAGATGAAGCACGGATTTTGATTAAGCAAATTGAGTCATTTGAT
AGAGGAATGTATGCTGGACCTGTTGGATACTTTGGTGGTTGGGAGAGTGAATTTTCTGTAGGCATAAGAT
CTGCTTTAGTCGAGAAGGGTCTTGGAGCATTGATCTATGCAGGAACAGGAATAGTTTCAGGAAGCGATTC
ATCCTCAGAGTGGAACGAGCTTGATCTTAAGATCTCTCAGTTCACTAAATCACTTGAACCAGCTTTGCAG
CCTATCAACTAA
Upstream Sequence
ATGGCATCGCTGCACTGTTCATCTTATTTTCTGGGCACAAATCTTACAAAACAAAACTCCGTTGCGATCT
TCCAAAGCTACTCTCCAACCTCATTCACCAAGCTTGCCTCTCGTGTCTCTCGCCAGAGGTTCCTACTCTG
CTCGCTGGCCATGAACGGGTGTGAGGCTGACCATAAAGAGCCACTTGGCACGGTAGAGACAAGAACTCTA
TCCACGGTTACGTCACCGGCTATTGCGACGGAGAAGCTGATAACCGCCGTCTCTAACCTTAAAACGGAAC
CGCCTTCGTTCTCATCCGGTATCATCCGATTACAGGTGCCCATTGACCAGACAATCGGTGCAATAGATTG
GCTTCATGCGCAAGATGGTGCTCTTCCTCGCAGTTTCTTTTCATGTCGTCGCAGCGACGCTGGCCGTCAA
GATCTTCTCCAAGACTTGGCGAGCGAGAATGTGAATGGATCATCTGATCGTAATCCGGTCAGTGTTGCTG
GAATCGGGTCTGCTGTATTTTTCCGTGATCTGAGCCCATTCTCTCATGATCACTGGAGATGTATCCGAAG
GTTTCTGTCTTCGACGTCTCCTTTGATTCGTGCGTACGGTGGACTTCGGTTTGATCCTAGAGGAAAGATC
GCTGTCGAATGGGAACAGTTTGGCTCTTTTTATTTCACAGTGCCTCAGGTCGAGTTTGCTGAGTTTGGGG
AAAACTCAGTGCTGGCTGCAACTGTTGCTTGGGACGAGGAGATCTCATGGACGCTTGAAAATGCTATTGA
AGCACTTCAGGAGACTATGCTTCAGGTTTCTTCTGGAATAATGAGATTACGGAGAGAATCTTTAGGAGTT
TCTGTTGTTAGCAAGAACCACGTTCCTAGTGAAGGAGCCTATTACCCTGCTGTAGCTAGTGCTCTGGAGA
TTATAAAGGCCAAAAATTCACCCCTAAGCAAGGTTGTGCTTGCACGCAGCACTAGAATCATTACTGATAC
CAATATTGATCCTATTGCTTGGTTAGCACGGTTGCAGCGTGAAGGACAAGACGCGTATCAATTCTGTCTT
CAGCCACCAGGTGCACCTGCATTCATAGGAAACACGCCTGAGAGGCTCTTCCACAGAAAACATCTAGGTG
TCTGCAGCGAGGCTTTGGCTGCAACTAGGCCTAGAGGTGATTCAGCAGTTTCTGATATGGAAATAGAGCG
TGACTTACTAACCAGTCCTAAAGACGATCTTGAGTTCTCCATCGTGCGAGAGAATATAAGAGAAAAACTA
AAAGCTATATGTGACAGAGTAATTGTGAGGCCCCCAAAAACAGTGAGAAAGCTTGCAAGAGTACAACACC
TTTATTCACAATTGGCAGGGCAGCTAAGAAGAGAAGATGATGAGTTTGACATCTTAACTGCTTTGCATCC
AACGCCAGCTGTTTGTGGATGTCCAGTAGATGAAGCACGGATTTTGATTAAGCAAATTGAGTCATTTGAT
AGAGGAATGTATGCTGGACCTGTTGGATACTTTGGTGGTTGGGAGAGTGAATTTTCTGTAGGCATAAGAT
CTGCTTTAGTCGAGAAGGGTCTTGGAGCATTGATCTATGCAGGAACAGGAATAGTTTCAGGAAGCGATTC
ATCCTCAGAGTGGAACGAGCTTGATCTTAAGATCTCTCAGTTCACTAAATCACTTGAACCAGCTTTGCAG
CCTATCAACTAA
Downstream Sequence
GTTCTTCTTCTTTTCTCCAAAATCTTTCACTTGTTGCGTTTCACTGTATTATATATATAT
ACACGTAATGAACGAATACAAACCATCGGCATGAAACAGAGGTTCCTACTCTGCTCGCTG
GCCATGAACGGGTGTGAGGCTGACCATAAAGAGCCACTTGGCACGGTAGAGACAAGAACT
CTATCCACGGTTACGTCACCGGCTATTGCGACGGAGAAGCTGATAACCGCCGTCTCTAAC
CTTAAAACGGAACCGCCTTCGTTCTCATCCGGTATCATCCGATTACAGGTACGTAATAGT
TTTCTTCATACTTACGCCACGTGGAGATCCAGCATTGGTATGTGTGATGTTAGAGCATGA
TTAACCCACAAACTCTATTGGGTCTCTTAATGAATATTTTACTAATTAAATATAATTAAG
AACTTGTTTAAGAAACACCTTGATTCATACCCTCCAATTAGTTTCTTATTTAGGGGTTCT
TAGAAAATGTTGTTTTTGTTGCTCAAAAAAACAAGACCAAACAATGCATACCAAGCAAAG
CATTCAAGACCAAACAAAAACAATCACCAATCTCATCCTCTACTTCTTCTGTTAAAACAA
AAACAATCCCATGAGAGATGAGTAAACAAGTACACATTTTCAACGAGTATAAAGACACAA
AGATCAAAACTTTCTGAATCTCAACCACAACAGATTATACAAACCAACGAGTATAGAGAC
ATTACTCTTCTCTTTGGATGCTTGATCATGGGAGACGTCGGAGAACTGAATGCTGCTCCC
AAAGACAAGCTATGTATCAATCGCAACACACGCAACCCAAAGCTTGACATAATCAAAACT
CATATGCTTCAAAAGCTCCAATGTAATGTACAAATCTCTCGTTCAACATGTTTAAAGAAA
GATGACAGAAAGTAAGCAACTTTTGTCTGAATTTGAGCAAATAAACAGAGCTAAAGAGAC
TTTAAAGTAAAAAGCAAACTGAAGTAAACATTACAATACAAGTACGAAACAGAACTTTCA
CCATATCTGTCTGTTACAACATCAACAAGAAAAAAAAGAAACTACAGATTTAAGGTATAT
AAAACCCCTAATTTACAGAGTTTCTAAGTACCTTTAATTCATACAAACAACGAAAACAGA
GAGATACCCAGAAGAGAATCAACCGGTGTAGATGTGTAGATTGACGGCGATGATCAAAAT
GGAGTAAATCTCGAAGTAAGATGAGAGTGTGAACAGCTATGGCTTTTCCGTTGATTTTGA
GATTACCGAAGTCTACTCCTCGGTTGGTTCGGGGCAGTGAGAAGAGAAGTCCAGGCGAGA
GAATCACTAAGAGGATGACGCCGACGATAACCGGAGCCCAATCCGCCATTGTTGTCATGT
AAAAGTGAAAAAGGTTACACCTTTTAGAGAGCGGTGGGTATAGAAAAGGACAGGAAGAGA
GATGGAAGAATCTAGAGAGGACGAACGGCTACTCGCCGGAGCCGTGATGGGAGGCGTCGT
CCACACGATCGTGGCCCCAATCGAGAGAGCCAAGCTCCTCCTTCAAACCCAAGAGAGCAA
TATCGGAATCGCAGAAGAAGGAGAGAAGTCGCGGAAGAGATGAAAGCCCAGAGGGAGACA
CGTGTGTCGTAAGACCCGTCTCTTGTAACTCCTAATTAAGAGACGTTTTTTCACATTGAA
GCTAATTTCTTTTTTTTTTAATCCTAATAATACTAAGAGACAGACTTAAGAAACAGCGTT
CATCATGTTCTTACTCTTGTCGTTTGCAAGAATCATTGAATGACTATTTAAAAATATTAT
TGTTAGAGGTAGGGGTCCGAATTTGAATTATTTTGCAATCATTGTTAAACTAAATTATAT
AATATTTTACAGAATAAATTATTGTATAAATAAGAAAATACAAAAACATTTCTTTTATTA
AATTTGAAAAATGCATTTCTTTTATTCAGTTTATAATTCTACAGTATTTTACAAAATAAG
TTATTGTAAAAGTAATAAAA
Pro Sequence
MASLHCSSYFLGTNLTKQNSVAIFQSYSPTSFTKLASRVSRQRFLLCSLA
MNGCEADHKEPLGTVETRTLSTVTSPAIATEKLITAVSNLKTEPPSFSSG
IIRLQVPIDQTIGAIDWLHAQDGALPRSFFSCRRSDAGRQDLLQDLASEN
VNGSSDRNPVSVAGIGSAVFFRDLSPFSHDHWRCIRRFLSSTSPLIRAYG
GLRFDPRGKIAVEWEQFGSFYFTVPQVEFAEFGENSVLAATVAWDEEISW
TLENAIEALQETMLQVSSGIMRLRRESLGVSVVSKNHVPSEGAYYPAVAS
ALEIIKAKNSPLSKVVLARSTRIITDTNIDPIAWLARLQREGQDAYQFCL
QPPGAPAFIGNTPERLFHRKHLGVCSEALAATRPRGDSAVSDMEIERDLL
TSPKDDLEFSIVRENIREKLKAICDRVIVRPPKTVRKLARVQHLYSQLAG
QLRREDDEFDILTALHPTPAVCGCPVDEARILIKQIESFDRGMYAGPVGY
FGGWESEFSVGIRSALVEKGLGALIYAGTGIVSGSDSSSEWNELDLKISQ
FTKSLEPALQPIN
mRNA Sequence
ATGGCATCGCTGCACTGTTCATCTTATTTTCTGGGCACAAATCTTACAAAACAAAACTCCGTTGCGATCT
TCCAAAGCTACTCTCCAACCTCATTCACCAAGCTTGCCTCTCGTGTCTCTCGCCAGAGGTTCCTACTCTG
CTCGCTGGCCATGAACGGGTGTGAGGCTGACCATAAAGAGCCACTTGGCACGGTAGAGACAAGAACTCTA
TCCACGGTTACGTCACCGGCTATTGCGACGGAGAAGCTGATAACCGCCGTCTCTAACCTTAAAACGGAAC
CGCCTTCGTTCTCATCCGGTATCATCCGATTACAGGTGCCCATTGACCAGACAATCGGTGCAATAGATTG
GCTTCATGCGCAAGATGGTGCTCTTCCTCGCAGTTTCTTTTCATGTCGTCGCAGCGACGCTGGCCGTCAA
GATCTTCTCCAAGACTTGGCGAGCGAGAATGTGAATGGATCATCTGATCGTAATCCGGTCAGTGTTGCTG
GAATCGGGTCTGCTGTATTTTTCCGTGATCTGAGCCCATTCTCTCATGATCACTGGAGATGTATCCGAAG
GTTTCTGTCTTCGACGTCTCCTTTGATTCGTGCGTACGGTGGACTTCGGTTTGATCCTAGAGGAAAGATC
GCTGTCGAATGGGAACAGTTTGGCTCTTTTTATTTCACAGTGCCTCAGGTCGAGTTTGCTGAGTTTGGGG
AAAACTCAGTGCTGGCTGCAACTGTTGCTTGGGACGAGGAGATCTCATGGACGCTTGAAAATGCTATTGA
AGCACTTCAGGAGACTATGCTTCAGGTTTCTTCTGGAATAATGAGATTACGGAGAGAATCTTTAGGAGTT
TCTGTTGTTAGCAAGAACCACGTTCCTAGTGAAGGAGCCTATTACCCTGCTGTAGCTAGTGCTCTGGAGA
TTATAAAGGCCAAAAATTCACCCCTAAGCAAGGTTGTGCTTGCACGCAGCACTAGAATCATTACTGATAC
CAATATTGATCCTATTGCTTGGTTAGCACGGTTGCAGCGTGAAGGACAAGACGCGTATCAATTCTGTCTT
CAGCCACCAGGTGCACCTGCATTCATAGGAAACACGCCTGAGAGGCTCTTCCACAGAAAACATCTAGGTG
TCTGCAGCGAGGCTTTGGCTGCAACTAGGCCTAGAGGTGATTCAGCAGTTTCTGATATGGAAATAGAGCG
TGACTTACTAACCAGTCCTAAAGACGATCTTGAGTTCTCCATCGTGCGAGAGAATATAAGAGAAAAACTA
AAAGCTATATGTGACAGAGTAATTGTGAGGCCCCCAAAAACAGTGAGAAAGCTTGCAAGAGTACAACACC
TTTATTCACAATTGGCAGGGCAGCTAAGAAGAGAAGATGATGAGTTTGACATCTTAACTGCTTTGCATCC
AACGCCAGCTGTTTGTGGATGTCCAGTAGATGAAGCACGGATTTTGATTAAGCAAATTGAGTCATTTGAT
AGAGGAATGTATGCTGGACCTGTTGGATACTTTGGTGGTTGGGAGAGTGAATTTTCTGTAGGCATAAGAT
CTGCTTTAGTCGAGAAGGGTCTTGGAGCATTGATCTATGCAGGAACAGGAATAGTTTCAGGAAGCGATTC
ATCCTCAGAGTGGAACGAGCTTGATCTTAAGATCTCTCAGTTCACTAAATCACTTGAACCAGCTTTGCAG
CCTATCAACTAA