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Detail for ZS11_A06G19770.t1

Genome:
ZS11: ZS11_A06G19770.t1
ZS11_v0: BnaA06T0172300ZS
WE: WE_A06G20280.t1
WE_v0: BnaA06T0167800WE
Darmor: A06p19790.1_BnaDAR
BH: BnaA06T193600BH
Quinta: BnaA06T0166000QU
ZS2: BnaA06T183100ZS2
SW: BnaA06T191800SW
Express61: A06p017120.1_BnaEXP
Xiaoyun: BnaA06G0178200XY
P202: BnaC08G051210P202.1
BL: BnaA06T193600BH
TA: BnaA06T187800TA
Da-Ae: Not available
RB: BnaA06T187500RB
No2127: BnaA06T0167400NO
P130: BnaC08G033320P130.1
Length: 93
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: GO:0005749(mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_009149866.1
NR E-value: 3.100000e-44
NR Score: 182.6
NR Annotation: XP_009149866.1 PREDICTED: succinate dehydrogenase subunit 7A, mitochondrial [Brassica rapa]
SwissProt Protein: Q9C5E8|SDH7A_ARATH
SwissProt E-value: 1.960000e-37
SwissProt Score: 124.0
SwissProt Annotation: Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH7A PE=1 SV=1
CDS Sequence (286 bp)
ATGGCGTTTTTGCTCAAGAACAACTCTATTTCATCTCACCTCCGATCTTCTTCCCAGAAGATGGATGGTG
GAGCCCTAGGTCAATCCCGTCGGGGGTTCCATGTGGAGCTAGGAGCTCGCGAGAAAGATCTATTGGCTGA
GAATGATGCTTTGAGGAGATTCAAGTCGCATAAGAAAGGAGTGCGCCAATTGAAAAGAATTGGAGATGTT
ATCACTGCTGTCGTTGTTGCTGGGTGCTGCTATGAGATCTATGCGAGAGCAACTATGAAAAAGGAAGCTT
AG
Upstream Sequence
GTCAAAACTGAATAATGCGTTAGCATTGGGGCAGAAACCAAAACACTAAAATTTACAATTTACACCCACA
TTGGAAACTGTACTTGTGCGCTTTTCGTCGTCTTTTCATCAATCGTTGTTATCGTCTCATTAAAATCGTT
GCTTACTCATCGCATCGGAGATGGCGTTTTTGCTCAAGAACAACTCTATTTCATCTCACCTCCGATCTTC
TTCCCAGAAGATGGATGGTGGAGCCCTAGGTCAATCCCGTCGGGGGTTCCATGTGGAGCTAGGAGCTCGC
GAGAAAGATCTATTGGCTGAGAATGATGCTTTGAGGAGATTCAAGTCGCATAAGAAAGGAGTGCGCCAAT
TGAAAAGAATTGGAGATGTTATCACTGCTGTCGTTGTTGCTGGGTGCTGCTATGAGATCTATGCGAGAGC
AACTATGAAAAAGGAAGCTTAGGCTGCATGAGGAAGCTCATGAGTCCTCCTTATGCTTTTATCATCAATC
TTCCCTTTTTAGCAAGTCTCTTCTGGAATTCATGTTGTTAGTCATGTTGGCTATTTGCTCAACGGTCTTT
GAATAAAAGTGAATACACGAAAAGGAATTGGTATTTTTTTTTGTTATTTTGGATCAGAAAGTCTCGTTCG
TCTGGAACTCATAAACTGTGTTACAAGATTCGTCTAATGTTATTTCTATTATCGCCTCTT
Downstream Sequence
GGTTTTTATGATCGAATCTCATCAAACGGATATGGTTGGATTCGTTTGATCTATTACGAC
AAGATCGTTAAGACTCGTTTGATCTATTTTGCAGAAGATGGATGGTGGAGCCCTAGGTCA
ATCCCGTCGGGGGTTCCATGTGGAGCTAGGAGCTCGCGAGAAAGATGTAAGTTTATTCTT
ACATTGAATCAATCTGGGATCCGATTGGATCTTGTTAATTGTTATCTGGAAGCCTTGGTT
GGTGTATAATCGAAACTAGCGAGAGATGGCTCCTTTTTGTTATAGTTAGATCTTTATGAG
ATTCTTCCATGGTTGTCTTCTTGTTGCAGCTATTGGCTGAGAATGATGCTTTGAGGAGAT
TCAAGTCGCATAAGAAAGGAGTGCGCCAATTGAAAAGAATTGGAGATGTTATCACTGCTG
TCGTTGTTGCTGGTATCCACTGCTACACTCTCTCACTAGTGATTATTTCAATCACTTATA
ATAGATGGGGGGGATGGAGATATATATCCTTGTGCATCACTAACATATACGTTTGTGTTG
TGGGGCTCATATGGTTTAGATTTGATGAAATTACTCTTCTGTGTGTTTGAGTTGAATAGC
TTTTCTCATGTGTGATGTCTTTCATTCAGGGTGCTGCTATGAGATCTATGCGAGAGCAAC
TATGAAAAAGGAAGCTTAGGCTGCATGAGGAAGCTCATGAGTCCTCCTTATGCTTTTATC
ATCAATCTTCCCTTTTTAGCAAGTCTCTTCTGGAATTCATGTTGTTAGTCATGTTGGCTA
TTTGCTCAACGGTCTTTGAATAAAAGTGAATACACGAAAAGGAATTGGTATTTTTTTTTG
TTATTTTGGATCAGAAAGTCTCGTTCGTCTGGAACTCATAAACTGTGTTACAAGATTCGT
CTAATGTTATTTCTATTATCGCCTCTTCTTGTTGAATAGTATTTCTATGGGATTTAAAAC
CACAAAAAAGTCAAAAATCAAATTGAAGTTGCTTTGTTTCACATATTCTGTGTAAACAGC
TTCATGGAACATTATAGAAAATATAGAATGATGGAACAAAATGAAAAAGTTGTTTCTTTG
TTGTATTATGGAACATTCAGAATCGCATCACACAAAGTTTGATGAATTTATCAACCACAA
AAAAAAATCATTTATTTAATTGCTCCTAGTATCGAAACAATGATATACTTAAAGTGTATG
CAACGAAACAACATTCGCAGAGATTCATGGAAGGAAGCATCTGCTGCGTGAGGGAGATAG
ATTAGCAACTTGATTCAGATCATTCCGGTTGTTCTTCAGATTGCTCCATCTCCAATTTCT
GCAAGGAAAAGAAATACGAGTTGTAAGATACAGAAATGGACCTAAAATAATGAGAATGTT
ATATCAGCCAGCTAAATTCATAAGTACAAGAAAAACTATGCAATATGTAGACAAAAGATC
AAGTGAAAAAAAGTGAATGCAAAACCATGAATCTACAAACAGATCGCATCTACCAGTTGC
TTAAGAAAATTGCTTATATCATCATAACCAAAGAAACTGCACAAGGTGAATGGAACGTTA
GCCATGACAGCAACAATCTTAGCAACCCTAATGCACACAATTGTAATGAGAAGCCAAGAC
AGCGTGGAAAAGAAATTTGAAGATTTGGTTAACTGGCTGGAGGTGCAGATGTCGTGGTCG
GTTAGAAAGCAGTTAGCCAGGACTAGCCTTATAAGTGTGTCTGAAGAGATTGTCTAGTCT
GTGGATTATAATAGGGTTTAGGCTTTCGTCGAGAGTCTCTCTATGTTTTGTTGAATTGAA
CAAGAAGAATAAGAACAAGTGTAAGACTAACATCTCAGATTAAGATCTTGATGCTAGAAA
GATTAAAGACATGATTCACAGTTGCTCTCTGATTACATTTCCAGAGGACGGAAGCATGTA
ACAACTCAGACAGACAGCAATCACTACTGGTTAGGTCTAATATTCATATCAAAATCAGAA
GTAGCAACCGATGCCCTAAA
Pro Sequence
MAFLLKNNSISSHLRSSSQKMDGGALGQSRRGFHVELGAREKDLLAENDA
LRRFKSHKKGVRQLKRIGDVITAVVVAGCCYEIYARATMKKEA
mRNA Sequence
GTCAAAACTGAATAATGCGTTAGCATTGGGGCAGAAACCAAAACACTAAAATTTACAATTTACACCCACA
TTGGAAACTGTACTTGTGCGCTTTTCGTCGTCTTTTCATCAATCGTTGTTATCGTCTCATTAAAATCGTT
GCTTACTCATCGCATCGGAGATGGCGTTTTTGCTCAAGAACAACTCTATTTCATCTCACCTCCGATCTTC
TTCCCAGAAGATGGATGGTGGAGCCCTAGGTCAATCCCGTCGGGGGTTCCATGTGGAGCTAGGAGCTCGC
GAGAAAGATCTATTGGCTGAGAATGATGCTTTGAGGAGATTCAAGTCGCATAAGAAAGGAGTGCGCCAAT
TGAAAAGAATTGGAGATGTTATCACTGCTGTCGTTGTTGCTGGGTGCTGCTATGAGATCTATGCGAGAGC
AACTATGAAAAAGGAAGCTTAGGCTGCATGAGGAAGCTCATGAGTCCTCCTTATGCTTTTATCATCAATC
TTCCCTTTTTAGCAAGTCTCTTCTGGAATTCATGTTGTTAGTCATGTTGGCTATTTGCTCAACGGTCTTT
GAATAAAAGTGAATACACGAAAAGGAATTGGTATTTTTTTTTGTTATTTTGGATCAGAAAGTCTCGTTCG
TCTGGAACTCATAAACTGTGTTACAAGATTCGTCTAATGTTATTTCTATTATCGCCTCTT