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Detail for ZS11_A06G23440.t1

Genome:
ZS11: ZS11_A06G23440.t1
ZS11_v0: Bnascaffold2794T0000300ZS
WE: WE_A06G23960.t1
WE_v0: BnaA06T0194300WE
Darmor: A06p23250.1_BnaDAR
BH: BnaA06T220400BH
Quinta: BnaA06T0195300QU
ZS2: BnaC02T374500ZS2
SW: BnaA06T220900SW
Express61: A06p019060.1_BnaEXP
Xiaoyun: BnaC01G0351700XY
P202: BnaC09G043720P202.1
BL: BnaA06T220400BH
TA: BnaC02T384800TA
Da-Ae: Not available
RB: BnaA06T217900RB
No2127: BnaA06T0194400NO
P130: BnaC02G027910P130.1
Length: 42
KOG ID: KOG1713
KOG E-value: 4.220000e-22
KOG Score: 83.2
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0008137(NADH dehydrogenase (ubiquinone) activity)
KEGG Ortholog: -
NR Protein: YP_006666295.1
NR E-value: 2.700000e-16
NR Score: 88.6
NR Annotation: YP_006666295.1 NADH dehydrogenase subunit J (chloroplast) [Pachycladon enysii]
SwissProt Protein: A4QJK2|NDHJ_AETGR
SwissProt E-value: 1.610000e-21
SwissProt Score: 83.2
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=ndhJ PE=3 SV=1
CDS Sequence (130 bp)
ATGTTAGGAATCACTTATGATAGCCATCCGCGGCTGAAATGGATCTTAATGCCCGAAAGTTGGATAGGGT
GGCTTTTACGTAAGGATTATATTGCCCCTAGTTTTTATGAAATACAAGATGCTTATTGA
Upstream Sequence
ATGTTAGGAATCACTTATGATAGCCATCCGCGGCTGAAATGGATCTTAATGCCCGAAAGTTGGATAGGGT
GGCTTTTACGTAAGGATTATATTGCCCCTAGTTTTTATGAAATACAAGATGCTTATTGA
Downstream Sequence
ATGATAAAAAATTTGAATGATAAAAATGAGCCTTAGTTTCTACAACTACGGACCTTCGCG
GAATATTTTGAATTCGAGTCGTTTTTAGATCAATCAAACAGAAGAATTAAGGTTTTATTC
ATATTATTATAGATAGCTTAATCTCCAATTTGCAAGATAGTTTTTACCTAAAAGACGACC
AATAGGATGAACTAAAAAAAAAAGAGTTATGCATTATGAACTTTGTATCGCGCATATAAC
TTAGTCAACTTTAGTCACATAACTGGGAATGAATAAGAGGCTGCTGTTGCAAAACATTCA
GGCCAATTTAGGATTTGATCATTTGTTTACTGTTGAGCCACTTGGTCTCAGCGGAGGTTT
AGCTTTTTTTTTATGGATGAATTTCAAGTTAATGTTTTATTTTCGAATAACAGAATGATT
GACATTGAGGCAGTCATTGATGGAATAAAAGTCTTTATGACGTTTGTTTATGGTGACCCT
GTTTTGGAAAGACGAGATCAAGTTTGGGAACGTCTTACGCGTTTCTCAACAACTAGAACT
AGACCTTGGTTCATGATTGGAGATTTCAATGAAATCACGGATCACAATGAGAAGGAAGGA
GGGAGACAGCGTTCTGATAGCTCGTTCCTACCTTTTAAGCAAATCCTTACAGACTGTGGG
ATGTTAGAGTTTCCTTTTACAGGGGACATGCTTTCATGGGTAGGGAAGAGAGCAGGACGT
GTAACTGTTTGATGTCGTCTAGACAGAGCAGTAGGAAATGCTGATTGGCATGAGAAGTTC
CCACACTCTAATGCCAAGTACTTGAGATTATGGGGATCGGACCATCGTCCGATTCTTGCA
GACATACTGAAAAAGCCAACGAGAAGATCAAAGAAATTCAAATTTGATAGGAGATGGCTA
GACAATGAAGAACTGAGGCAAGTCATTCTTGAGGGATGGAAATCTCCTGATCTACCCCCC
AATGCGACTATAATGGAACATATTTCTAGTTGTCGAAAAGCCTTGAGTGAGTGGAGGAAA
CAACACAATATCAACTCGGCAAAGCTAGTGGAGGAGTTAAAGGAGAAAGTTGAGGGTTTA
TATGCAGACGACAATGCGGCAGCGGAGGAAATTGCAGCAGCGTTGAAGGAACTCTCTGAT
GCTCTTAAGGCAGAAGAAATGTTCTGGAAACAAAAGAGTAGAGTGTTTTGGCTGAGAGAG
GGAGATAAAAATACCAAATTTTTTCATGCCTTAACGAAGCAAAGGAGAGCGAGGAACAAA
ATCACGCAGCTTCGGGATGTTGATGGTAACATAGTTGAGGATGAGGAAGGCCTGGTAGCC
ATTGCTACTAGCTATTTTCGGCAAATCTTCGAATCATCTACACCAGAAGACATTGAAGAG
GCGCTATCTGAAGTTCCTACGACGATCATAGGATCAATGAATGACAGCCTCACAGCTCCT
ATTTCTGAATGGGAGGTTAAATTAGCTCTCTTTGCTATGCATCCAGATAAGGCGCCGGGA
CCAGATGGGATGACTGCACTTTTTTACCAACAGTTTTGGGATATAGTCAAGCAGGATTTA
ACTCTTATGGTGAATAAATTCCTGTTTGAAGGACATATAGCCAATGGTCTGAATGATACA
AACATATGCCTTATCCCGAAAACAACTAAGCCTAATGATATGGCTCAGTTTCGACCCATA
AGCTTGTGTAATGTTAGCTACAAGATCGTCTCGAAGGTCTTATGCCAGAGACTAAAGAAA
GTCTTGCCAGGATTGATATCAGAAACCCAGTCGGCCTTTGTTACTGGAAGACAGATTTCA
GATAATATCATGATTGCTCAAGAGATGTTTCATGCCCTACGAACTAAACCGAGTGGGCGT
AATAAGAGGAGGGCCATCAAGGCGGATATGAGTAAGGCATATGATAGGATGGAATGGTCG
TTTATCGAAGCTGTGATGCGTAAGATGGGATTCTCTGAGACATGGATCACCTGGATTATG
AGGTGCATTACGTCGGTCAA
Pro Sequence
MLGITYDSHPRLKWILMPESWIGWLLRKDYIAPSFYEIQDAY
mRNA Sequence
ATGTTAGGAATCACTTATGATAGCCATCCGCGGCTGAAATGGATCTTAATGCCCGAAAGTTGGATAGGGT
GGCTTTTACGTAAGGATTATATTGCCCCTAGTTTTTATGAAATACAAGATGCTTATTGA