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Detail for ZS11_A06G24610.t1

Genome:
ZS11: ZS11_A06G24610.t1
ZS11_v0: BnaA05T0244400ZS
WE: WE_C06G22530.t1
WE_v0: Bnascaffold2533T0001000WE
Darmor: C06p23140.1_BnaDAR
BH: Bnascaffold0318T000500BH
Quinta: BnaA06T0194000QU
ZS2: BnaA04T084600ZS2
SW: BnaA04T089700SW
Express61: C06p015450.1_BnaEXP
Xiaoyun: BnaC01G0350300XY
P202: BnaC06G050740P202.1
BL: Bnascaffold0318T000500BH
TA: BnaA04T084100TA
Da-Ae: Not available
RB: Not available
No2127: BnaC01T0197100NO
P130: BnaC01G000080P130.1
Length: 473
KOG ID: KOG4668
KOG E-value: 7.050000e-138
KOG Score: 403.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K05573 ndhB; NAD(P)H-quinone oxidoreductase subunit 2 [EC:7.1.1.2]
NR Protein: VDD65987.1
NR E-value: 8.200000e-234
NR Score: 814.7
NR Annotation: VDD65987.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: P0CC47|NU2C2_CITSI
SwissProt E-value: Not available
SwissProt Score: 630.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic OS=Citrus sinensis OX=2711 GN=ndhB2 PE=3 SV=1
CDS Sequence (1442 bp)
ATGATCTGGCATGTACAGAATGAAAATTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATT
TGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATCCTTCTTCTGAT
GATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCGTCAACAAGTTTCGTAATG
AGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCAGGAAATTTCCAAACGA
ACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTCTGTATTCCTCTATCCGTAGA
GTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTATTCTAGGAGGA
ATTGTTTTATGTGGTGCTAACGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCT
ACCTATTATCTGGATATACCAAGAAAGATGTACGATCTAATGAAGCTACTATGAAATATTTACTCATGGG
TGGGGCAAGCTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAG
CTTCAAGAAATAGTGAATGGTCTTATCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTA
TATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCTACAGGGTCAGGAACAACGAATCTCTTTATGATAA
ACGGATCCATTTTGCAAGTTTGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAAG
AAAGACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTCCACTGA
ATTTTCGATATTCCTTTTATTTCTCATCAAATGAATGGCATCTTCTTCTGGAAATCCTAGCTATTCTTAG
CATGATATGGGGGAATCTCATTGTTATTACTCAAACAAGCATGAAACGTATGCTTGCATATTCGTCCATA
GGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCGAGCATGATAA
CTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTTGCATTATATTATTTGGTCTACGTAC
CGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTGGCTCTCTTTAGCTCTA
TGTCTCTTATCCCTAGGAGGTCTTCCTCCACTAGCAGGTATGATTGTATGTGTGATAGCATCTACTATAC
CAGGAATATCAATGAACCCGATTATTGCGATTGCTCAGGATACCCTTTTAGCTTCTAGAATCTATTTCTT
AGTTCAAGATCCCTCTTACTAA
Upstream Sequence
ATGATCTGGCATGTACAGAATGAAAATTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATT
TGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATCCTTCTTCTGAT
GATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCGTCAACAAGTTTCGTAATG
AGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCAGGAAATTTCCAAACGA
ACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTCTGTATTCCTCTATCCGTAGA
GTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTATTCTAGGAGGA
ATTGTTTTATGTGGTGCTAACGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCT
ACCTATTATCTGGATATACCAAGAAAGATGTACGATCTAATGAAGCTACTATGAAATATTTACTCATGGG
TGGGGCAAGCTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAG
CTTCAAGAAATAGTGAATGGTCTTATCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTA
TATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCTACAGGGTCAGGAACAACGAATCTCTTTATGATAA
ACGGATCCATTTTGCAAGTTTGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAAG
AAAGACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTCCACTGA
ATTTTCGATATTCCTTTTATTTCTCATCAAATGAATGGCATCTTCTTCTGGAAATCCTAGCTATTCTTAG
CATGATATGGGGGAATCTCATTGTTATTACTCAAACAAGCATGAAACGTATGCTTGCATATTCGTCCATA
GGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCGAGCATGATAA
CTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTTGCATTATATTATTTGGTCTACGTAC
CGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTGGCTCTCTTTAGCTCTA
TGTCTCTTATCCCTAGGAGGTCTTCCTCCACTAGCAGGTATGATTGTATGTGTGATAGCATCTACTATAC
CAGGAATATCAATGAACCCGATTATTGCGATTGCTCAGGATACCCTTTTAGCTTCTAGAATCTATTTCTT
AGTTCAAGATCCCTCTTACTAA
Downstream Sequence
AGCCCCTTCTCATCAATGGACTCCTGACGTATACGAAGGAGTGCGGTTCGTTTGAGAAAT
TCCTACCTCTCTATCTATCTCTGAGATGTTTGGATTTTTCAAAACTCCATGGACATGCAG
AAGAGAAATGCTATCCCCACGCAGACCAAGACAGAACTTTGACTTGTTCAAATAACAATT
AATGTGAAGCAGGGTCAGGAACAACGAATCTCTTTATGATAAACGGATCCATTTTGCAAG
TTTGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAAGAAAGACTT
GAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTGTAAT
AGGAGCATCCGTCGACAAAAGGATCACCCTAAGATGATCATCTCATGGCTATTGAGAACG
AATCAAATCAGATGAGTTCCATTTCTCAATCTTTCGGACGTGCTCCTACGGAACCAAGGT
CGAAACGATTGAGAAAAATCAGTCATTCACAACCACTGATGAAGGATTCCTCGAAAAGTT
AAGGATTAGTAATCCGTTTTAGAAAGGATTCGATCTTATACATACGCGAGGAAAGTAATC
AAAAAAGAAAGAAGATGAGTTCTTCTTTACTTTTATCCTTTAGGAGCCGTGCGAGATGAA
AGTCTCATGCACGGTTTTGAATGAGAGAAAGAAGTGAGGAATCCTCTTTTCGACTCTGAC
TCTCCCACTCCAGTCGTTGCTTTTCTTTCTGTTACTTCGAAAGTAGCTGCTTCAGCTTTA
GCCACTGAATTTTCGATATTCCTTTTATTTCTCATCAAATGAATGGCATCTTCTTCTGGA
AATCCTAGCTATTCTTAGCATGATATGGGGGAATCTCATTGTTATTACTCAAACAAGCAT
GAAACGTATGCTTGCATATTCGTCCATAGGTCAAATCGGATATGTAATTATTGGAATAAT
TGTTGGAGACTCAAATGGTGGATATGCGAGCATGATAACTTATATGCTGTTCTATATCTC
CATGAATCTAGGAACTTTTGCTTGCATTATATTATTTGGTCTACGTACCGGAACTGATAA
CATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTGGCTCTCTTTAGCTCTATG
TCTCTTATCCCTAGGAGGTCTTCCTCCACTAGCAGGGTTTTTGGAAAACTCCATTTATTC
TGGTGTGGATGGCGGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTT
CTTTCTATCTACTATTATCTAAAAATAATCAAGTTATTAATGACTGGACGAAACCAAGAA
ATAACCCCTCACGTGCGAAATTATAGAATATCCCTTTAAGATCAACCAATTCCATCGAAT
TGAGTATGATTGTATGTGTGATAGCATCTACTATACCAGGAATATCAATGAACCCGATTA
TTGCGATTGCTCAGGATACCCTTTTAGCTTCTAGAATCTATTTCTTAGTTCAAGATCCCT
CTTACTAACTGGAATCAAAGAATTAGTAGATCGGTTCCGCCCTAAATGGAATGGACTAAG
GTTATGAACTTATAATCTATAATCTGATGATCGAGTCGATTCCATGATTATAAGTTCATT
CCATACCGGACCAGACCGGAATAAGGTTATATACATTCTCATTATGAGAAGGGGTCATTC
GAGCGTATCTAAATAGATACTATGTTTACATAGGGATCCCTACGTCGTTACATTCCATTT
AGGATTAGGAATAGGCGAAATCTGACCTACTTTTACATATCTCTCGTTATTTGGGACCCT
ATTCACCTCTTTGGTTGGACTTCTATTGAATCGAGAAATAGGTTTGATTGTCCATCTTTT
GATATAATATTAATATATATATAAGGCATCCTCCGGATAAGGATAATTCAAATCTAAGCA
ATTAGATGTCCGACTCGGGCCTATATGACATGACCGATCAATAGAAATACTTCAACACTC
CACCTTTGTCATATATTCAA
Pro Sequence
MIWHVQNENFILDSTRIFMKAFHLLLFDGSFIFPECILIFGLILLLMIDS
TSDQKDIPWLYFISSTSFVMSITALLFRWREEPMISFSGNFQTNNFNEIF
QFLILLCSTLCIPLSVEYIECTEMAITEFLLFVLTAILGGIVLCGANDLI
TIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSW
LYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSYRVRN
NESLYDKRIHFASLLLRVVPTKDRTNDVYKKDLNSRCRCYIVGSHPSETT
SPLNFRYSFYFSSNEWHLLLEILAILSMIWGNLIVITQTSMKRMLAYSSI
GQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIILFGLRTGTD
NIRDYAGLYTKDPFWLSLALCLLSLGGLPPLAGMIVCVIASTIPGISMNP
IIAIAQDTLLASRIYFLVQDPSY
mRNA Sequence
ATGATCTGGCATGTACAGAATGAAAATTTCATTCTCGATTCTACGAGAATTTTTATGAAAGCCTTTCATT
TGCTTCTCTTCGATGGAAGTTTTATTTTCCCAGAATGTATCCTAATTTTTGGCCTAATCCTTCTTCTGAT
GATCGATTCAACCTCTGATCAAAAAGATATACCTTGGTTATATTTCATCTCGTCAACAAGTTTCGTAATG
AGCATAACGGCCCTATTGTTCCGATGGAGAGAAGAACCTATGATTAGCTTTTCAGGAAATTTCCAAACGA
ACAATTTCAACGAAATCTTTCAATTTCTTATTTTACTATGTTCAACTCTCTGTATTCCTCTATCCGTAGA
GTACATTGAATGTACAGAAATGGCTATAACAGAGTTTCTGTTATTCGTATTAACAGCTATTCTAGGAGGA
ATTGTTTTATGTGGTGCTAACGATTTAATAACTATCTTTGTAGCTCCAGAATGTTTCAGTTTATGCTCCT
ACCTATTATCTGGATATACCAAGAAAGATGTACGATCTAATGAAGCTACTATGAAATATTTACTCATGGG
TGGGGCAAGCTCTTCTATTCTGGTTCATGGTTTCTCTTGGCTATATGGTTCATCCGGGGGAGAGATTGAG
CTTCAAGAAATAGTGAATGGTCTTATCAATACACAAATGTATAACTCCCCAGGAATTTCAATTGCGCTTA
TATTCATCACTGTAGGAATTGGGTTCAAGCTTTCCTACAGGGTCAGGAACAACGAATCTCTTTATGATAA
ACGGATCCATTTTGCAAGTTTGTTATTACGGGTAGTTCCTACAAAGGATCGGACTAATGACGTATACAAG
AAAGACTTGAATTCTCGATGTAGATGCTACATAGTTGGTTCTCATCCTTCAGAGACTACGAGTCCACTGA
ATTTTCGATATTCCTTTTATTTCTCATCAAATGAATGGCATCTTCTTCTGGAAATCCTAGCTATTCTTAG
CATGATATGGGGGAATCTCATTGTTATTACTCAAACAAGCATGAAACGTATGCTTGCATATTCGTCCATA
GGTCAAATCGGATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCGAGCATGATAA
CTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTTGCATTATATTATTTGGTCTACGTAC
CGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTGGCTCTCTTTAGCTCTA
TGTCTCTTATCCCTAGGAGGTCTTCCTCCACTAGCAGGTATGATTGTATGTGTGATAGCATCTACTATAC
CAGGAATATCAATGAACCCGATTATTGCGATTGCTCAGGATACCCTTTTAGCTTCTAGAATCTATTTCTT
AGTTCAAGATCCCTCTTACTAA