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Detail for ZS11_A06G32230.t1

Genome:
ZS11: ZS11_A06G32230.t1
ZS11_v0: BnaA06T0308800ZS
WE: WE_A06G35910.t1
WE_v0: BnaA06T0341500WE
Darmor: A06p32830.1_BnaDAR
BH: BnaA06T283500BH
Quinta: BnaA06T0297500QU
ZS2: BnaA06T269900ZS2
SW: BnaA06T296500SW
Express61: A06p026010.1_BnaEXP
Xiaoyun: BnaA06G0331300XY
P202: BnaA06G024570P202.1
BL: BnaA06T283500BH
TA: BnaA06T271700TA
Da-Ae: Not available
RB: BnaA06T286400RB
No2127: BnaA06T0311300NO
P130: BnaC09G007770P130.2
Length: 153
KOG ID: KOG3389
KOG E-value: 1.110000e-97
KOG Score: 279.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022900(electron transport chain)
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03937 NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4
NR Protein: NP_001288995.1
NR E-value: 2.500000e-83
NR Score: 313.2
NR Annotation: NP_001288995.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Brassica rapa]
SwissProt Protein: Q9FJW4|NDUS4_ARATH
SwissProt E-value: 4.690000e-97
SwissProt Score: 279.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1
CDS Sequence (468 bp)
ATGGCGCTTCGTGCTACTCAATCGACTGCTCGCATGGCGGCGAATCTCCGACGCGTGGCTCGGCCTTTCT
CAACAGACGCGGTGGTGGAGTCGGATTACAAGCGTGGCGAGATCGGCAAGGTCTCCGGAATCCCAGAGGA
GCATCTCGCACGAAAGGTGATAATATACTCGCCTGCAAGAACAGCGACCCAGCAAGGATCTGGGAAACTT
GGGAAATGGAAGATTAACTTCGTCTCCACCCTCAAGTGGGAAAATCCATTGATGGGCTGGACTTCTACTG
GTGACCCTTATGCCAATGTTGGGGACTCCGCTCTTGGTTTTGATTCTGAGCTAGCTGCCAAGTCCTTTGC
TGAGCGTCATGGCTGGGACTATGTGGTCAAGGAGCCCAAAACACCGTTATTGAAGGCCAAGTCATACTCG
GACAACTTCAAGTGGAAAGGCAAACCTCAACTAGAGAACTGA
Upstream Sequence
GATTTTTTGCAGATCTCAACAACATTTGTAGGTGACGATGGCGCTTCGTGCTACTCAATCGACTGCTCGC
ATGGCGGCGAATCTCCGACGCGTGGCTCGGCCTTTCTCAACAGACGCGGTGGTGGAGTCGGATTACAAGC
GTGGCGAGATCGGCAAGGTCTCCGGAATCCCAGAGGAGCATCTCGCACGAAAGGTGATAATATACTCGCC
TGCAAGAACAGCGACCCAGCAAGGATCTGGGAAACTTGGGAAATGGAAGATTAACTTCGTCTCCACCCTC
AAGTGGGAAAATCCATTGATGGGCTGGACTTCTACTGGTGACCCTTATGCCAATGTTGGGGACTCCGCTC
TTGGTTTTGATTCTGAGCTAGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGACTATGTGGTCAAGGA
GCCCAAAACACCGTTATTGAAGGCCAAGTCATACTCGGACAACTTCAAGTGGAAAGGCAAACCTCAACTA
GAGAACTGATCTCCTTCTTCTTCTTCTTCCATTTCTCGAACAAAAGGAGAAGCCCCCACTTGATATAAAG
AAAGGCTCTCATTTTTTATTCGCTATTTACCATCTGTGAGCTTTTTTTCTGAACTATTATCCATGGTTGG
ATTCTCTTTTTTTTTTTTAATTCCTTATAACAATAATATGATGATGATGATGAC
Downstream Sequence
GGTATTCGATTTCGATGTCTTCCTCTCTTTTTTTTGTGAATTGATTTTAGGAATTAGGGT
TTCAGTCCACGGATTGAGGTAGATGATGAGTCTTGATTCGATTTGGATCAATTGATTATA
TGTGCAGGTGATAATATACTCGCCTGCAAGAACAGCGACCCAGCAAGGATCTGGGAAACT
TGGGAAATGGAAGATTAACTTCGTCTCCACCCTCAAGTATCCATTCCAATCTCTCTTTGT
TTTTGTTTTGTAATCCTCTTAGTGTATAGTGGTATTTGGGCTCATTTGTGGATTCACCTC
GATGTTCTCTTCGATATGAGTCTTATGATTAGTGTTGTCCAATCACTTTTAATAGCTTCT
GTTGTCATCAGTTATTTGGCCTTTGATGTGTTTTGTGTAGGTGGGAAAATCCATTGATGG
GCTGGACTTCTACTGGTGACCCTTATGCCAATGTTGGGGACTCCGCTCTTGGTTTTGATT
CTGAGCTAGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGACTATGTGGTAATGTTCT
TTCCTACTACTTTTGTCATAATAACCCTCTCTGGTTACAATACATTCATTCACATTTATA
TAAAACTGTGTAATGATTCCGTTCTAAGTATATACTTAAGATTGCACATCTTTGATTTGA
CTCATGGCAGGTCAAGGAGCCCAAAACACCGTTATTGAAGGTTAGTATCTTACAAATCCC
ACTTAATCTCTCTTCAATCTAACCCCCCTATCTGTTTAAGTCTAGGTAACCCTTGGATGT
TAAAAGATTGGATTTTTATCTCTAAGATTAGTGGTATTAAGGCTCTGCTTGAATGTAAAC
TTGTGTTGCTTCCTCAGTTCTGGCTTTCTGCCTTAGATATAGAATCGGACAGTGATTTGT
TTGTTAAATCATCATCATACGGCTTATCAAGCGAATGCATAACATGACTAAACAATATAA
AGTTATAATTTAGATAAGGATCCTCTCTTTGTCTCTCTGATCATTCATCTTACCATAACT
GCAGGCCAAGTCATACTCGGACAACTTCAAGTGGAAAGGCAAACCTCAACTAGAGAACTG
ATCTCCTTCTTCTTCTTCTTCCATTTCTCGAACAAAAGGAGAAGCCCCCACTTGATATAA
AGAAAGGCTCTCATTTTTTATTCGCTATTTACCATCTGTGAGCTTTTTTTCTGAACTATT
ATCCATGGTTGGATTCTCTTTTTTTTTTTTAATTCCTTATAACAATAATATGATGATGAT
GATGACAAACAGTTCTTTGGTATTTCATCAATCTTTATGGTCAAATATGCTGATCTACTT
CTCGATAGTTTCGATGTCATGCATGTGAAAGCGAGATATGGTCATAGTCGAGTCAATAAT
CCATAAGATACAAAACGAACGAAGATAAACAACGGAACATAAGTCTGTCTTTTTCATTGC
ATGTAATAGAAAAAGAAATCGTTGAACTGATAAATTCTCCGATCAGAAACAAGCATCCAG
GAGACAGCAACAGCAGAGCGCAGCCAAACTGTGATTGCATATGTTAAAAAACAGAGCATA
ACATATTAACACTACTGGATCAAGAACTAAAATAATAATAACAGTAGTAATAAACAAGAT
GGGATCAAGAACATACCATCCTTCGAGCATACCAGCTTGTTGCTTTTGCTGGGGAGCTTG
AGAGTACTGCGGTGGAGGATAACCTTGAGCAGGGTATCCCTGAGCATATCCTGGCGGTGG
ATAACCGGCGGGAGGATAGCCAGCCGGAGGATAACCGTCCTTAGGAGGATACCCTTCAAA
CAGGAATTTCAAAAGCACATTAAAACCAGCACAGAAGAAGCTAAAACAGAATATCAAAGA
TCAAAGAAACTAAAAAATAGAATATTACCTTGGGGAGGAGGAGCACCGACAGGATGTTCT
TGATTATACATCTTTGAGTTCTTCTAGCTTTTGAGTTCTTTTAAGTGTTTTGTTTCTCTC
CTCTCTTCTCTTCTCTTTTT
Pro Sequence
MALRATQSTARMAANLRRVARPFSTDAVVESDYKRGEIGKVSGIPEEHLA
RKVIIYSPARTATQQGSGKLGKWKINFVSTLKWENPLMGWTSTGDPYANV
GDSALGFDSELAAKSFAERHGWDYVVKEPKTPLLKAKSYSDNFKWKGKPQ
LEN
mRNA Sequence
GATTTTTTGCAGATCTCAACAACATTTGTAGGTGACGATGGCGCTTCGTGCTACTCAATCGACTGCTCGC
ATGGCGGCGAATCTCCGACGCGTGGCTCGGCCTTTCTCAACAGACGCGGTGGTGGAGTCGGATTACAAGC
GTGGCGAGATCGGCAAGGTCTCCGGAATCCCAGAGGAGCATCTCGCACGAAAGGTGATAATATACTCGCC
TGCAAGAACAGCGACCCAGCAAGGATCTGGGAAACTTGGGAAATGGAAGATTAACTTCGTCTCCACCCTC
AAGTGGGAAAATCCATTGATGGGCTGGACTTCTACTGGTGACCCTTATGCCAATGTTGGGGACTCCGCTC
TTGGTTTTGATTCTGAGCTAGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGACTATGTGGTCAAGGA
GCCCAAAACACCGTTATTGAAGGCCAAGTCATACTCGGACAACTTCAAGTGGAAAGGCAAACCTCAACTA
GAGAACTGATCTCCTTCTTCTTCTTCTTCCATTTCTCGAACAAAAGGAGAAGCCCCCACTTGATATAAAG
AAAGGCTCTCATTTTTTATTCGCTATTTACCATCTGTGAGCTTTTTTTCTGAACTATTATCCATGGTTGG
ATTCTCTTTTTTTTTTTTAATTCCTTATAACAATAATATGATGATGATGATGAC