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Detail for ZS11_A06G39050.t1

Genome:
ZS11: ZS11_A06G39050.t1
ZS11_v0: BnaC07T0325400ZS
WE: WE_C07G41750.t1
WE_v0: BnaA06T0398200WE
Darmor: C07p38790.1_BnaDAR
BH: BnaA06T345700BH
Quinta: BnaC07T0305400QU
ZS2: BnaC07T304200ZS2
SW: BnaA06T355800SW
Express61: C07p019350.1_BnaEXP
Xiaoyun: BnaC07G0339900XY
P202: Not available
BL: BnaA06T345700BH
TA: BnaA06T330800TA
Da-Ae: Not available
RB: BnaA06T346300RB
No2127: BnaC07T0308900NO
P130: Not available
Length: 98
KOG ID: KOG3446
KOG E-value: 3.780000e-59
KOG Score: 177.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03946 NDUFA2; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
NR Protein: XP_009151588.1
NR E-value: 4.000000e-50
NR Score: 202.2
NR Annotation: XP_009151588.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Brassica rapa]
SwissProt Protein: Q9FIJ2|NDUA2_ARATH
SwissProt E-value: 1.600000e-58
SwissProt Score: 177.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=3 SV=1
CDS Sequence (301 bp)
ATGGCATGGAGAGGAAACATATCGAAGTCTCTGAAAGAGCTCAGGATTCTCCTCTGTCAGTCTTCCCCAG
CTAGCGCTTCCACCAGGACGTTCGTGGAGAAGAATTACAAAGATTTGAAGACTCTGAACCCTAAGTTCCC
TTTCCTGATTCGCGAATGCAGTGGGATCCAGCCTCAGATGTGGGCCAGATATGATATGGGAGTGGAGAGG
TGTGTGAACTTGGACGGTATGAACGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTGAAAGCCGGCG
GAGCTACAAAAGCCTAA
Upstream Sequence
AATAACTTTAATATTTCCATTTTTTTTCATTTACTTGAACCACCCACAGAGAGAGTTTCGTCATTGTACA
ACTGTAGAAGGAGAGGAAGAAGAAGAAGAAGGAGCGATGGCATGGAGAGGAAACATATCGAAGTCTCTGA
AAGAGCTCAGGATTCTCCTCTGTCAGTCTTCCCCAGCTAGCGCTTCCACCAGGACGTTCGTGGAGAAGAA
TTACAAAGATTTGAAGACTCTGAACCCTAAGTTCCCTTTCCTGATTCGCGAATGCAGTGGGATCCAGCCT
CAGATGTGGGCCAGATATGATATGGGAGTGGAGAGGTGTGTGAACTTGGACGGTATGAACGAGTCACAGA
TTCTCAAGTCTCTTGAAGACCTTGTGAAAGCCGGCGGAGCTACAAAAGCCTAAAAGGTTGTTCTTTTTTT
AAAAAAAATCTATTTAGATGATCCCGAATAAGATACAAACTTGAAACACATTCAATCTTGACTGTTCCTG
TTTATTCTATTACTTTGCAACTACTTGGGTGTCATATCGCCTTTCGTTTTTGTTTGTAATCCTTGAACTT
GTTATTAAATGATCCTTTCGTGTGATTGTTGAAAACATATTAGAAAGAGGATGAAATAAACATGATAAAT
GTAGAAGTGATTTGGGGCAA
Downstream Sequence
GGTTTCTCTCCGATCTTTGATCAAACCAAAATCTGTGAGATCGGCGAATTCGATAGACCA
TTTTTAGGTTTTCGATTGTGTATGAAGGGGGTTTTGATTTGATTCAGGACGTTCGTGGAG
AAGAATTACAAAGATTTGAAGACTCTGAACCCTAAGTTCCCTTTCCTGATTCGCGAATGC
AGTGGGATCCAGCCTCAGATGTGGGCCAGATATGGTAATGATAGCTTAACTACCTTGGGC
TATCAATGATAATGTATTGTGTTGTGTTATGTTGTGTTGTAACATCATCTGCATAGTAGT
AGTGCCTAACCGCTTAGATGATTACATGAATTGATTGCTGTGTGTAACCCCCTAGGGCAC
ACTGGTCATTCTCATTGCTAGCTAGAGGATAGATAATGCGACTTCTTCTTATATTTTTAC
TGGTTTCGAGCAGCTAAAATTAATCAGGCCATCTTCTGTTAAGAGAACTAAATCATCTTG
AAGCTGTCGTGTGTGAAAGTAATAGTACAGAGATCTGTGCTCATGCAAATGGGCATGTTT
AGGAAGTTGTTAGCTTTGAGGTCAGAGACAAAAATCAATGGTGACAAGCGTCTGCTTTAA
GACTCCGCTTTTCATGACTGTGTTATAGGGGTTAGGTGAAAGTAACGCTTTTGCATAATG
GGCCGACTTTTTTGTTGTTCTTGTATTCTACTTTGGCAACTAGTATCATCTGTTTGTTTG
TTGTGTCTTGGCTTACTTGTGTGTGGCAGATATGGGAGTGGAGAGGTGTGTGAACTTGGA
CGGTATGAACGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTGAAAGCCGGCGGAGC
TACAAAAGCCTAAAAGGTTGTTCTTTTTTTAAAAAAAATCTATTTAGATGATCCCGAATA
AGATACAAACTTGAAACACATTCAATCTTGACTGTTCCTGTTTATTCTATTACTTTGCAA
CTACTTGGGTGTCATATCGCCTTTCGTTTTTGTTTGTAATCCTTGAACTTGTTATTAAAT
GATCCTTTCGTGTGATTGTTGAAAACATATTAGAAAGAGGATGAAATAAACATGATAAAT
GTAGAAGTGATTTGGGGCAATTATAATTTTAATTTGTGTGAGGTTTGTGATGTATTCCCG
ATATAACACTCGTGAATTCTCAGTTCTAACCAAATATTATATTCAATGATTTTGCAAGTT
GAAGTGTCAAAATCCTGATTACGCATTTTCATGCACAAAATCATATAACTTTCCTATATA
AAACTGTAAAGTTGCATTACATGAGCTTTCCCTTACCTGAAGGCCCATAGAGAGAGAGAG
AGAATCATCTATCAGTCTTTTGAGAGCGAATCAAGTTCGTAACTGACAGCAAAAACTGAA
GGTCCAATCCCAAGGGAGAGTGGCACGTGCGAATACCAAGTTAGAAGAAAAAAAAGTGAT
TTAAGAACCAAACTGCTCAAGTGGCTATCCTCAAACCGTTGTCGTTAAGATAGAGAGATT
TAGTTGTCACTCAATAAATACTAATAAGATAAGTATATTTATCCATAGATATAGACGCAA
CAGTTTGATGAATGAAGATAGATTTGGTTTCTCTTTGATGCGGACGGAACTGGCAATGTA
CGAACCAATCAAAAGCACCGACGACGGTGATCAATGGCGTGAGAAGAAAGACATTGAGTC
CGCTTCCTCTCTCCAGATTTCTTCTCATCACGGTCCTTATCTCCCTTCCGACAAGGAACG
ATTAGTTTCTCTCGACGTCTTCCGTGGCATTACCGTAGCCGTGAGTTTCTCTCTAACCTT
GTTTTCATCGCTTACCCCTTTTTCTAGTAACAGTTTCAATCTCTTACATATACTTCAGTT
TCTGAATACAGTTAAGATCAGCCTTGAGTGTTTTGATGTTGTTGTGTATGTTAATAAACA
GCTGATGATACTTGTGGATGATGTTGGAGGGATCTTCCCAGCTATTAACCATTCACCTTG
GGACGGTGTAACGCTTGCTG
Pro Sequence
MAWRGNISKSLKELRILLCQSSPASASTRTFVEKNYKDLKTLNPKFPFLI
RECSGIQPQMWARYDMGVERCVNLDGMNESQILKSLEDLVKAGGATKA
mRNA Sequence
AATAACTTTAATATTTCCATTTTTTTTCATTTACTTGAACCACCCACAGAGAGAGTTTCGTCATTGTACA
ACTGTAGAAGGAGAGGAAGAAGAAGAAGAAGGAGCGATGGCATGGAGAGGAAACATATCGAAGTCTCTGA
AAGAGCTCAGGATTCTCCTCTGTCAGTCTTCCCCAGCTAGCGCTTCCACCAGGACGTTCGTGGAGAAGAA
TTACAAAGATTTGAAGACTCTGAACCCTAAGTTCCCTTTCCTGATTCGCGAATGCAGTGGGATCCAGCCT
CAGATGTGGGCCAGATATGATATGGGAGTGGAGAGGTGTGTGAACTTGGACGGTATGAACGAGTCACAGA
TTCTCAAGTCTCTTGAAGACCTTGTGAAAGCCGGCGGAGCTACAAAAGCCTAAAAGGTTGTTCTTTTTTT
AAAAAAAATCTATTTAGATGATCCCGAATAAGATACAAACTTGAAACACATTCAATCTTGACTGTTCCTG
TTTATTCTATTACTTTGCAACTACTTGGGTGTCATATCGCCTTTCGTTTTTGTTTGTAATCCTTGAACTT
GTTATTAAATGATCCTTTCGTGTGATTGTTGAAAACATATTAGAAAGAGGATGAAATAAACATGATAAAT
GTAGAAGTGATTTGGGGCAA