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DETAIL

Detail for ZS11_A06G40050.t1

Genome:
ZS11: ZS11_A06G40050.t1
ZS11_v0: BnaA06T0376100ZS
WE: WE_C07G40610.t1
WE_v0: BnaC07T0307800WE
Darmor: A06p40400.1_BnaDAR
BH: BnaA06T354600BH
Quinta: BnaC07T0294600QU
ZS2: BnaA06T338600ZS2
SW: BnaA06T364500SW
Express61: A06p032650.1_BnaEXP
Xiaoyun: BnaA06G0401400XY
P202: BnaA06G029650P202.6
BL: BnaA06T354600BH
TA: BnaA09T030200TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g22890D
RB: BnaA06T355300RB
No2127: BnaA06T0376000NO
P130: BnaA06G033860P130.4
Length: 844
KOG ID: KOG2901
KOG E-value: Not available
KOG Score: 845.0
KOG Annotation: Function unknown
Biological Process: GO:1902600(proton transmembrane transport)
Cellular Component: GO:0033179(proton-transporting V-type ATPase, V0 domain)
Molecular Function: GO:0046961(proton-transporting ATPase activity, rotational mechanism)
KEGG Ortholog: K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
NR Protein: VDC68418.1
NR E-value: Not available
NR Score: 1680.6
NR Annotation: VDC68418.1 unnamed protein product [Brassica rapa]
SwissProt Protein: Q9LJI5|VA0D1_ARATH
SwissProt E-value: Not available
SwissProt Score: 738.0
SwissProt Annotation: V-type proton ATPase subunit d1 OS=Arabidopsis thaliana OX=3702 GN=VHA-d1 PE=2 SV=1
CDS Sequence (2571 bp)
ATGCTGAGAAGATTACTGACGCAAACATCCTCTCCTCGCCGTCTTCTCTCTTCCAAGACTCCCTTCTTCT
CAAAACCCTCTCTTTCACCGTTTTCCTCATTACCCTCTTCACCGGATCCACCTTCCTCGGCGAGTAGCCA
TGTCGAAGAGTCAGGTTCCGCCGCCGCCGCTGGAACAACCATCTCCGTCGACCGTTCCGCTCTCTTCAAT
CCTCCCGACCACTCTCATGAACCCACACCGGACTCCGAGCTCGTCAAGCACCTCAAGAGCGTCATCAAGT
TTCGTGGTGGGCCAATCTCAGTGGCGGAGTATATGGAGGAGGTGTTGACGAATCCTAGATCAGGTTATTA
CATGAACCGTGATGTGTTTGGAGCTCAGGGTGATTTCATTACTTCTCCTGAAGTTAGCCAGATGTTTGGC
GAGATGATTGGTGTTTGGACTGTTTGTCTTTGGGAACAAATGGGTAAGCCAGAGAGGGTTAATCTCATTG
AGCTAGGACCAGGGAGAGGAACACTCATGGTCGATCTCCTTCGTGGTACATCAAAGTTTAGAAACTTCAC
GGAGTCATTGCATATACACTTGGTGGAGTGCAGTCCCGCGTTGCAGAAGATTCAGCACCAGAATCTGAAG
TGCACAGATGAAAGTAGTTCTGAGAAGAAAGCTATAAGTTCATTAGCTGGGACACCTGTGCATTGGCACG
CTACTCTTGAAGAGGTACCATCAGGAGTACCGACGATAATCATAGCTCATGAGTTTTATGATGCTCTTCC
AGTTCATCAGTTTCAGAAAACTCCCAGAGGTTGGTGTGAGAAGATGGTTGATGTGGGAGAAGATTCACAG
TTCCGCTTTGTTCTATCCCCACAGCCCACACCTGCAGCCTTATACCTTGTGAAACGTTGCACTTGGGCTA
CACCTGAGGAAAAGGAGAAGCTGGAGCATGTCGAGATCAGCCCCAAATCAATGGATTTGACTCAAGAAAT
AGCCAAGAGAGTAGGCTCTGATGGAGGTGGAGCACTAATAATCGATTACGGGAAGGATGTAATCATTTCA
GACAGTCTTCAGGCTATTAGAGAACACAAGTTTGTCAACATACTGGATGATCCAGGCTCTGCGGATCTAA
GTGCTTATGTCGATTTCCCTTCGATAAAACACTCTGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGG
ACCTATGACTCAGTCTCAGTTCTTGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAAC
TGCGACGATGAGCAAGCTGAGTCTTTGAGGTCAGGGTACTGGAGGCTTGTTGGAGATGGTGAGGCACCTT
TCTGGGAAGGACCTGATGAACAGACGCCGATTGGAATGGGGGAGAGGTATCTTGCAATGGCTATTGTCAA
CCGAAACCAAGGCACTCCGGCTCCGTTCCAATCTCTCCCGTGTCAATCATTGAGATCTGAATATCTCCTG
AAGGGAAGGATGTACGGATTCGAGGCGCTTACGTTCAACATCCATGGCGGATACTTGGAGGCGATCGTGA
GAGGCCACCGTGCTGGTCTTCTCACCACGGCCGATTACAACAATCTGTGCCAATGTGAGAACCTCGACGA
CATCAAAATGCACCTCTCCGCCACCAAGTACGGCTCTTACCTCCAGAACGAACCGTCACCTCTGCATACG
ACCACAATCGTGGAGAAGTGTACACTCAAGCTTGTTGATGATTACAAGCATATGCTTTGCCAAGCTACTG
AGCCCATGTCCACCTTCTTAGAGTACATCAGATACGGCCACATGATTGACAATGTCGTGCTGATTGTTAC
TGGAACTTTGCACGAGAGAGATGTTCAAGAGTTGATCGAGAAATGTCACCCTTTAGGCATGTTTGACAGC
ATTGCCACACTGGCAGTTGCTCAGAACATGAGGGAGCTCTATAGGTTGGTGCTTGTTGATACTCCTCTGG
CTCCATATTTTTCTGAATGCTTGACATCTGAGGATTTGGATGACATGAACATTGAGATTATGAGGAACAC
CCTCTACAAAGCATACCTTGAGGATTTTTACAAGTTCTGTCAGAAACTTGGTGGGGCAACATCAGAGATA
ATGTCTGACCTTCTGGCCTTCGAAGCTGACAGAAGAGCTGTGAACATCACCATCAATAGCATTGGCACTG
AGCTTACAAGAGAAGACAGGAAGAAACTGTACTCCAACTTTGGTCTCCTCTATCCATATGGTCACGAGGA
GCTTGCTATCTGCGAAGATATAGATCAGGTTCGTGGTGTAATGGAGAAGTATCCTCCTTACCAAGCTATA
TTCTCCAAGATGTCTTATGGAGAGAGCCAGATGCTTGACAAGGCATTTTATGAAGAAGAAGTCAGAAGGC
TTTGCTTAGCCTTTGAGCAACAGTTCCATTACGGGGTGTTCTTTGCGTATATGAGGTTGAGGGAGCAAGA
GATCAGGAACCTGATGTGGATATCCGAGTGTGTTGCACAGAACCAGAAGTCGAGGATCCACGACAGTGTC
GTCTACATGTTCTGA
Upstream Sequence
ATGCTGAGAAGATTACTGACGCAAACATCCTCTCCTCGCCGTCTTCTCTCTTCCAAGACTCCCTTCTTCT
CAAAACCCTCTCTTTCACCGTTTTCCTCATTACCCTCTTCACCGGATCCACCTTCCTCGGCGAGTAGCCA
TGTCGAAGAGTCAGGTTCCGCCGCCGCCGCTGGAACAACCATCTCCGTCGACCGTTCCGCTCTCTTCAAT
CCTCCCGACCACTCTCATGAACCCACACCGGACTCCGAGCTCGTCAAGCACCTCAAGAGCGTCATCAAGT
TTCGTGGTGGGCCAATCTCAGTGGCGGAGTATATGGAGGAGGTGTTGACGAATCCTAGATCAGGTTATTA
CATGAACCGTGATGTGTTTGGAGCTCAGGGTGATTTCATTACTTCTCCTGAAGTTAGCCAGATGTTTGGC
GAGATGATTGGTGTTTGGACTGTTTGTCTTTGGGAACAAATGGGTAAGCCAGAGAGGGTTAATCTCATTG
AGCTAGGACCAGGGAGAGGAACACTCATGGTCGATCTCCTTCGTGGTACATCAAAGTTTAGAAACTTCAC
GGAGTCATTGCATATACACTTGGTGGAGTGCAGTCCCGCGTTGCAGAAGATTCAGCACCAGAATCTGAAG
TGCACAGATGAAAGTAGTTCTGAGAAGAAAGCTATAAGTTCATTAGCTGGGACACCTGTGCATTGGCACG
CTACTCTTGAAGAGGTACCATCAGGAGTACCGACGATAATCATAGCTCATGAGTTTTATGATGCTCTTCC
AGTTCATCAGTTTCAGAAAACTCCCAGAGGTTGGTGTGAGAAGATGGTTGATGTGGGAGAAGATTCACAG
TTCCGCTTTGTTCTATCCCCACAGCCCACACCTGCAGCCTTATACCTTGTGAAACGTTGCACTTGGGCTA
CACCTGAGGAAAAGGAGAAGCTGGAGCATGTCGAGATCAGCCCCAAATCAATGGATTTGACTCAAGAAAT
AGCCAAGAGAGTAGGCTCTGATGGAGGTGGAGCACTAATAATCGATTACGGGAAGGATGTAATCATTTCA
GACAGTCTTCAGGCTATTAGAGAACACAAGTTTGTCAACATACTGGATGATCCAGGCTCTGCGGATCTAA
GTGCTTATGTCGATTTCCCTTCGATAAAACACTCTGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGG
ACCTATGACTCAGTCTCAGTTCTTGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAAC
TGCGACGATGAGCAAGCTGAGTCTTTGAGGTCAGGGTACTGGAGGCTTGTTGGAGATGGTGAGGCACCTT
TCTGGGAAGGACCTGATGAACAGACGCCGATTGGAATGGGGGAGAGGTATCTTGCAATGGCTATTGTCAA
CCGAAACCAAGGCACTCCGGCTCCGTTCCAATCTCTCCCGTGTCAATCATTGAGATCTGAATATCTCCTG
AAGGGAAGGATGTACGGATTCGAGGCGCTTACGTTCAACATCCATGGCGGATACTTGGAGGCGATCGTGA
GAGGCCACCGTGCTGGTCTTCTCACCACGGCCGATTACAACAATCTGTGCCAATGTGAGAACCTCGACGA
CATCAAAATGCACCTCTCCGCCACCAAGTACGGCTCTTACCTCCAGAACGAACCGTCACCTCTGCATACG
ACCACAATCGTGGAGAAGTGTACACTCAAGCTTGTTGATGATTACAAGCATATGCTTTGCCAAGCTACTG
AGCCCATGTCCACCTTCTTAGAGTACATCAGATACGGCCACATGATTGACAATGTCGTGCTGATTGTTAC
TGGAACTTTGCACGAGAGAGATGTTCAAGAGTTGATCGAGAAATGTCACCCTTTAGGCATGTTTGACAGC
ATTGCCACACTGGCAGTTGCTCAGAACATGAGGGAGCTCTATAGGTTGGTGCTTGTTGATACTCCTCTGG
CTCCATATTTTTCTGAATGCTTGACATCTGAGGATTTGGATGACATGAACATTGAGATTATGAGGAACAC
CCTCTACAAAGCATACCTTGAGGATTTTTACAAGTTCTGTCAGAAACTTGGTGGGGCAACATCAGAGATA
ATGTCTGACCTTCTGGCCTTCGAAGCTGACAGAAGAGCTGTGAACATCACCATCAATAGCATTGGCACTG
AGCTTACAAGAGAAGACAGGAAGAAACTGTACTCCAACTTTGGTCTCCTCTATCCATATGGTCACGAGGA
GCTTGCTATCTGCGAAGATATAGATCAGGTTCGTGGTGTAATGGAGAAGTATCCTCCTTACCAAGCTATA
TTCTCCAAGATGTCTTATGGAGAGAGCCAGATGCTTGACAAGGCATTTTATGAAGAAGAAGTCAGAAGGC
TTTGCTTAGCCTTTGAGCAACAGTTCCATTACGGGGTGTTCTTTGCGTATATGAGGTTGAGGGAGCAAGA
GATCAGGAACCTGATGTGGATATCCGAGTGTGTTGCACAGAACCAGAAGTCGAGGATCCACGACAGTGTC
GTCTACATGTTCTGA
Downstream Sequence
GGTAAATGATTCCACCTCCACACTCTATAGTGAGATTCAATTTGACAGCTTTGGAGAGTC
TGATTTGTTGTTTGTTAAATTAGACCACTCTCATGAACCCACACCGGACTCCGAGCTCGT
CAAGCACCTCAAGAGCGTCATCAAGGTAACTTAGACCGATTCTTAGTAGAAAGGTTGAAA
CTTTTTGTATGCAAGTTTGATCAAATTAGTGCATTCGCACAGTTTCGTGGTGGGCCAATC
TCAGTGGCGGAGTATATGGAGGAGGTGTTGACGAATCCTAGATCAGGTTATTACATGAAC
CGTGATGTGTTTGGAGCTCAGGGTGATTTCATTACTTCTCCTGAAGTTAGCCAGATGTTT
GGCGAGGTAACATTACTTAGAAACAGTGAATTTGTGTGTTTGAGATTTGTTTATTTTCTT
ACTAGGTGTGTTGTGATGATGTTAGATGATTGGTGTTTGGACTGTTTGTCTTTGGGAACA
AATGGGTAAGCCAGAGAGGGTTAATCTCATTGAGCTAGGACCAGGGAGAGGAACACTCAT
GGTCGATCTCCTTCGTGTATGTATTTTGATCCTCTTGTGTTATGTCTCCAGAACCGCGAA
AACTATCTCACTGCTGTCTCTGTTTTTTGGGGACTGTCCACGTTTAGGGTACATCAAAGT
TTAGAAACTTCACGGAGTCATTGCATATACACTTGGTGGAGTGCAGTCCCGCGTTGCAGA
AGATTCAGCACCAGAATCTGAAGTGCACAGATGAAAGTAGTTCTGAGAAGAAAGCTATAA
GTTCATTAGCTGGGACACCTGTGCATTGGCACGCTACTCTTGAAGAGGTACCATCAGGAG
GTATGCATTTTTTGCTACATATTACTTGGAACTTGAGACTCTCTTATGAGACTCTTGTCT
TAACATAGCAACAGTCAAAGTGCTAAACATGTCTTAAGCAATGAGTTTTATGATGCTCTT
CCTTGACAGTACCGACGATAATCATAGCTCATGAGTTTTATGATGCTCTTCCAGTTCATC
AGTTTCAGGTAAGTGTGGGTGTAACTTTCATATTATAGTCTTCTCCTTTAGTTTAGTATG
TGTATCTTATATGGACTCAATCTCTGCAGAAAACTCCCAGAGGTTGGTGTGAGAAGATGG
TTGATGTGGGAGAAGATTCACAGTAAGTATTTGTATATATACAATATGCAAAGAAAACTT
CAGAGCTGATGGATGAGTTGTTGGTTTTGTAGGTTCCGCTTTGTTCTATCCCCACAGCCC
ACACCTGCAGCCTTATACCTTGTGAAACGTTGCACTTGGGCTACACCTGAGGAAAAGGAG
AAGCTGGAGCATGTCGAGATCAGCCCCAAATCAATGGATTTGACTCAAGAAATAGCCAAG
AGAGTAGGCTCTGATGGAGGTGGAGCACTAATAATCGATTACGGGAAGGATGTAATCATT
TCAGACAGTCTTCAGGTGTGTGTCCTAAAAAAAATGCTCTGATCAAATGCTTATAAAGTC
TTTTGTGTCTGAATCTATGGATATGATATAAGGCTATTAGAGAACACAAGTTTGTCAACA
TACTGGATGATCCAGGCTCTGCGGATCTAAGTGCTTATGTCGATTTCCCTTCGATAAAAC
ACTCTGCTGAGGAAGCTTCAGGTTCGTTCCTATACTCACTGCTCGTTCCCTTATTGTTAT
AACTTACTTAAAAGCAAATGAAAACGTGTCTGTGTGTTGTGCAGAAAATGTGACAGTCCA
TGGACCTATGACTCAGTCTCAGTTCTTGGGTTCGCTTGGAATAAACTTCAGAGTTGATGC
GCTGCTGCAGAACTGCGACGATGAGCAAGCTGAGTCTTTGAGGTCAGGGTACTGGAGGCT
TGTTGGAGATGGTGAGGCACCTTTCTGGGAAGGACCTGATGAACAGACGCCGATTGGAAT
GGGGGAGAGGTATCTTGCAATGGCTATTGTCAACCGAAACCAAGGCACTCCGGCTCCGTT
CCAGTAACAAAGATTTAAAC
Pro Sequence
MLRRLLTQTSSPRRLLSSKTPFFSKPSLSPFSSLPSSPDPPSSASSHVEE
SGSAAAAGTTISVDRSALFNPPDHSHEPTPDSELVKHLKSVIKFRGGPIS
VAEYMEEVLTNPRSGYYMNRDVFGAQGDFITSPEVSQMFGEMIGVWTVCL
WEQMGKPERVNLIELGPGRGTLMVDLLRGTSKFRNFTESLHIHLVECSPA
LQKIQHQNLKCTDESSSEKKAISSLAGTPVHWHATLEEVPSGVPTIIIAH
EFYDALPVHQFQKTPRGWCEKMVDVGEDSQFRFVLSPQPTPAALYLVKRC
TWATPEEKEKLEHVEISPKSMDLTQEIAKRVGSDGGGALIIDYGKDVIIS
DSLQAIREHKFVNILDDPGSADLSAYVDFPSIKHSAEEASENVTVHGPMT
QSQFLGSLGINFRVDALLQNCDDEQAESLRSGYWRLVGDGEAPFWEGPDE
QTPIGMGERYLAMAIVNRNQGTPAPFQSLPCQSLRSEYLLKGRMYGFEAL
TFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSY
LQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMID
NVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVD
TPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATSEI
MSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAI
CEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRRLCLAFEQ
QFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF
mRNA Sequence
ATGCTGAGAAGATTACTGACGCAAACATCCTCTCCTCGCCGTCTTCTCTCTTCCAAGACTCCCTTCTTCT
CAAAACCCTCTCTTTCACCGTTTTCCTCATTACCCTCTTCACCGGATCCACCTTCCTCGGCGAGTAGCCA
TGTCGAAGAGTCAGGTTCCGCCGCCGCCGCTGGAACAACCATCTCCGTCGACCGTTCCGCTCTCTTCAAT
CCTCCCGACCACTCTCATGAACCCACACCGGACTCCGAGCTCGTCAAGCACCTCAAGAGCGTCATCAAGT
TTCGTGGTGGGCCAATCTCAGTGGCGGAGTATATGGAGGAGGTGTTGACGAATCCTAGATCAGGTTATTA
CATGAACCGTGATGTGTTTGGAGCTCAGGGTGATTTCATTACTTCTCCTGAAGTTAGCCAGATGTTTGGC
GAGATGATTGGTGTTTGGACTGTTTGTCTTTGGGAACAAATGGGTAAGCCAGAGAGGGTTAATCTCATTG
AGCTAGGACCAGGGAGAGGAACACTCATGGTCGATCTCCTTCGTGGTACATCAAAGTTTAGAAACTTCAC
GGAGTCATTGCATATACACTTGGTGGAGTGCAGTCCCGCGTTGCAGAAGATTCAGCACCAGAATCTGAAG
TGCACAGATGAAAGTAGTTCTGAGAAGAAAGCTATAAGTTCATTAGCTGGGACACCTGTGCATTGGCACG
CTACTCTTGAAGAGGTACCATCAGGAGTACCGACGATAATCATAGCTCATGAGTTTTATGATGCTCTTCC
AGTTCATCAGTTTCAGAAAACTCCCAGAGGTTGGTGTGAGAAGATGGTTGATGTGGGAGAAGATTCACAG
TTCCGCTTTGTTCTATCCCCACAGCCCACACCTGCAGCCTTATACCTTGTGAAACGTTGCACTTGGGCTA
CACCTGAGGAAAAGGAGAAGCTGGAGCATGTCGAGATCAGCCCCAAATCAATGGATTTGACTCAAGAAAT
AGCCAAGAGAGTAGGCTCTGATGGAGGTGGAGCACTAATAATCGATTACGGGAAGGATGTAATCATTTCA
GACAGTCTTCAGGCTATTAGAGAACACAAGTTTGTCAACATACTGGATGATCCAGGCTCTGCGGATCTAA
GTGCTTATGTCGATTTCCCTTCGATAAAACACTCTGCTGAGGAAGCTTCAGAAAATGTGACAGTCCATGG
ACCTATGACTCAGTCTCAGTTCTTGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAAC
TGCGACGATGAGCAAGCTGAGTCTTTGAGGTCAGGGTACTGGAGGCTTGTTGGAGATGGTGAGGCACCTT
TCTGGGAAGGACCTGATGAACAGACGCCGATTGGAATGGGGGAGAGGTATCTTGCAATGGCTATTGTCAA
CCGAAACCAAGGCACTCCGGCTCCGTTCCAATCTCTCCCGTGTCAATCATTGAGATCTGAATATCTCCTG
AAGGGAAGGATGTACGGATTCGAGGCGCTTACGTTCAACATCCATGGCGGATACTTGGAGGCGATCGTGA
GAGGCCACCGTGCTGGTCTTCTCACCACGGCCGATTACAACAATCTGTGCCAATGTGAGAACCTCGACGA
CATCAAAATGCACCTCTCCGCCACCAAGTACGGCTCTTACCTCCAGAACGAACCGTCACCTCTGCATACG
ACCACAATCGTGGAGAAGTGTACACTCAAGCTTGTTGATGATTACAAGCATATGCTTTGCCAAGCTACTG
AGCCCATGTCCACCTTCTTAGAGTACATCAGATACGGCCACATGATTGACAATGTCGTGCTGATTGTTAC
TGGAACTTTGCACGAGAGAGATGTTCAAGAGTTGATCGAGAAATGTCACCCTTTAGGCATGTTTGACAGC
ATTGCCACACTGGCAGTTGCTCAGAACATGAGGGAGCTCTATAGGTTGGTGCTTGTTGATACTCCTCTGG
CTCCATATTTTTCTGAATGCTTGACATCTGAGGATTTGGATGACATGAACATTGAGATTATGAGGAACAC
CCTCTACAAAGCATACCTTGAGGATTTTTACAAGTTCTGTCAGAAACTTGGTGGGGCAACATCAGAGATA
ATGTCTGACCTTCTGGCCTTCGAAGCTGACAGAAGAGCTGTGAACATCACCATCAATAGCATTGGCACTG
AGCTTACAAGAGAAGACAGGAAGAAACTGTACTCCAACTTTGGTCTCCTCTATCCATATGGTCACGAGGA
GCTTGCTATCTGCGAAGATATAGATCAGGTTCGTGGTGTAATGGAGAAGTATCCTCCTTACCAAGCTATA
TTCTCCAAGATGTCTTATGGAGAGAGCCAGATGCTTGACAAGGCATTTTATGAAGAAGAAGTCAGAAGGC
TTTGCTTAGCCTTTGAGCAACAGTTCCATTACGGGGTGTTCTTTGCGTATATGAGGTTGAGGGAGCAAGA
GATCAGGAACCTGATGTGGATATCCGAGTGTGTTGCACAGAACCAGAAGTCGAGGATCCACGACAGTGTC
GTCTACATGTTCTGA