SEARCH

DETAIL

Detail for ZS11_A06G43440.t1

Genome:
ZS11: ZS11_A06G43440.t1
ZS11_v0: BnaA06T0404800ZS
WE: WE_A06G47180.t1
WE_v0: BnaA06T0435200WE
Darmor: A06p43870.1_BnaDAR
BH: BnaA06T384900BH
Quinta: BnaA06T0389200QU
ZS2: BnaA06T367700ZS2.1
SW: BnaA09T262400SW.1
Express61: A06p035830.1_BnaEXP
Xiaoyun: BnaA06G0433700XY
P202: BnaA06G031700P202.1
BL: BnaA06T384900BH
TA: BnaA06T371100TA
Da-Ae: Not available
RB: BnaA06T386100RB.1
No2127: BnaA06T0405100NO
P130: BnaA06G036590P130.1
Length: 102
KOG ID: KOG3468
KOG E-value: 2.050000e-62
KOG Score: 186.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: GO:0005739(mitochondrion)
Molecular Function: -
KEGG Ortholog: K03963 NDUFB7; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
NR Protein: XP_013664979.1
NR E-value: 9.900000e-52
NR Score: 207.6
NR Annotation: XP_013664979.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Brassica napus]
SwissProt Protein: Q9SKC9|NDUB7_ARATH
SwissProt E-value: 8.700000e-62
SwissProt Score: 186.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=3 SV=1
CDS Sequence (313 bp)
ATGGAGGTTCCAGGTTCATCGAAGAAGATGATCGCAACGCAGGAAGAGATGGTGGCAGCCAAAGTACCGC
TCGGATACAGAGATCAGTGCGCTCATCTCCTGATGCCGCTCAACAAATGTCGCCAGGCTGAGTTCTTCCT
CCCGTGGAAGTGCGAGGACGAGCGCCACGTGTACGAGAAGTGCGAGTACGAGCTCGTGATGGAGAGGATG
CTCGCGATGCAGAAGATCCGCGAGGAAGAAGCCAAGGCTAAACAGAGTAAGCTACAAGGGAACGGTGTTC
CTCTTATCCCTAAGACCGCTAATGCGTAG
Upstream Sequence
CCGGGTCAAGCAAATCGGAGTCGCCAAAGAGAAAGAAGGAGAGAGGTTAGGGATCGCGAGAGGAAAATGG
AGGTTCCAGGTTCATCGAAGAAGATGATCGCAACGCAGGAAGAGATGGTGGCAGCCAAAGTACCGCTCGG
ATACAGAGATCAGTGCGCTCATCTCCTGATGCCGCTCAACAAATGTCGCCAGGCTGAGTTCTTCCTCCCG
TGGAAGTGCGAGGACGAGCGCCACGTGTACGAGAAGTGCGAGTACGAGCTCGTGATGGAGAGGATGCTCG
CGATGCAGAAGATCCGCGAGGAAGAAGCCAAGGCTAAACAGAGTAAGCTACAAGGGAACGGTGTTCCTCT
TATCCCTAAGACCGCTAATGCGTAGCCCCTCCTCGGTTCGATCTTCCAGCTTCCCGGGAATCTCTGGAAC
TGTGAAGAAGGTGGGGCTCTGCTTTTCAGTATTTTCTTCTTGTTGGTGATGAAAATTTGTTGCTACATTC
TCAGATGTTCAAAGATTATCTCTCTTTTCGTTTTTTTTCTTCCTCTTGTTTAACTTTGTGAAACTGTTTC
ACAGAAAGAAAAAAAATAAGATGCAAACACTCATCTTTTTGTTCGTTTTTCTATCTTTAATCTTTGAGAG
AGAGAAAATGGAACATATTATATACAATATAAACAATTTCATCGAGTTAAATTTATTCAGCCAATTATAT
TTAATATAGACAA
Downstream Sequence
GCCCCTCCTCGGTTCGATCTTCCAGCTTCCCGGTTAGTCTCCGGTTCCATTTGATTGAAT
TAGATATTCGCGGTTCTATTTTTCGGTTTAGGTTTGGTTGCGAATTGAATGAGATTGTTT
GGTGTTTAGATTTGAACATTTGACTAATATTGGATTCAGTTTTGAGGAAAGAGTCTTCTT
TTACACCACAAGCATAAGCCTTTTTTGGATCAATCATGCTTGAGAAATGTGTTCGTCTTT
GCATTTGATTGTTCTTGTAAGCTATCTCAAGTTTGGATAAGCCTAGTTCCATCGTTAACT
CGACTCTCTGCAGGTTGTGTTAGTCTTGTTTCCTGTTACACTCAAAAGCTTAATACATTA
GTCTTTAAGTAGGAAGTAATTAACACTATCAGTGTGTGAGCTTGTAAATTGTGTCTTAGA
TATTATGGCTACAGTTACTTTGGGGTTGTTAGTTATAAATCCTTAGGAATCTTTGTGATT
ACAGCAGGCAATGAACACTTAGCTCTGTTCTTCTGCTTTTTTACTAAGCCGGAAGAAGAG
ATTCGCTGATTAACAGGACGCAGCTCAAATTTGCTAGACTATATATATTATGTTTGATTT
ATGTTCTCTTACTTGTAGGCTTTGAAAGCCTTAAGCTTGGTTATTGTGTGAGCTTGTAAA
TTGTGTCACAGATAGGCTACAGTCACTTCGTGTTACTTGCTAAATCCTTATGAAGAATCA
CAGAACGCACTAATGTGTGTCTTAGTCTCCGGTTCATCGGGTCTTCTTGGTGATTTGATT
GAATTAGATATTCGTGGTTCCATTTTTCGGTTTAGGTTTGGTTCCGAATTGAATGAGATT
GGTTGGTGTTTAGATTTGAACATTTGACTAATATTGGATTCAGTTTTGAGGAAAGAGTCT
TCTTTGACGAATTGTTCTTCTTTGCATTTGTTTGTTCTTGTAAGCCATCTCAATCAGTGA
TGTCTCAAGTTTGGATAAGCCTAGTTCCATCGTTAACTCGACTCTCTGCAGGTTTTGTTA
GTCCTAGAGAGTTCTTTTTGCACTCAATTTAGCTTAAAGTACTACTCAGTAGTAGCTTGT
AAGTTGTTTCTCAGATATCATGGCTATAGTTACTTTGGTGTTGCTATTTATAAATCCTTA
GGACGCTTTGTGATTACAGCACGCACTACACACTTAGCTCTGTTCTTCTGCTTTAAAGAT
TCTGCAAGAAGATACACTCCTTTATTTGGTTGATTATATATGCATATAGCATATGTTCAG
AAGATACATTCCTCTGAACATTTATGTTATCCCACTTCTAGGCTTACAAACTCTTATGCT
TGGTCAATGTTTGAACTTGTAAACTGTCTCTTAGATATCGTGGCTAGTCACTATGTTGTA
CTTATATGAATCTGTAAGAAGCATTGTGAAATTACAGCACTCACTACAGATTTAGGCCTG
TGTCTGAACATCTTCTGGTTTAAAGATTCTGCAAAGCAGATACACACTCCTTGATTCGGT
GGATTGTATATGCATATGTCGGTCAGTGTCACAACAGCTACATGAATATTCTCTTTATTT
ATACCTTCTCACTTGCCATTGAGTACTACAATGTTCATTGTCCTTGCCACTATGATTTGA
CAGTAACGGGTGTTTCTCTGCTCTATAGACAGACACCCGTACTAAATGTTTGGTCTGAGA
TTCTCTAGCATGTCAATGATTTTGTTTCACCTGACTCTTTTGCTCATTCTTCTTCTGTGT
CCTAATTCATACTCTGAAATATTTGGACAGGGAATCTCTGGAACTGTGAAGAAGGTGGGG
CTCTGCTTTTCAGTATTTTCTTCTTGTTGGTGATGAAAATTTGTTGCTACATTCTCAGAT
GTTCAAAGATTATCTCTCTTTTCGTTTTTTTTCTTCCTCTTGTTTAACTTTGTGAAACTG
TTTCACAGAAAGAAAAAAAATAAGATGCAAACACTCATCTTTTTGTTCGTTTTTCTATCT
TTAATCTTTGAGAGAGAGAA
Pro Sequence
MEVPGSSKKMIATQEEMVAAKVPLGYRDQCAHLLMPLNKCRQAEFFLPWK
CEDERHVYEKCEYELVMERMLAMQKIREEEAKAKQSKLQGNGVPLIPKTA
NA
mRNA Sequence
CCGGGTCAAGCAAATCGGAGTCGCCAAAGAGAAAGAAGGAGAGAGGTTAGGGATCGCGAGAGGAAAATGG
AGGTTCCAGGTTCATCGAAGAAGATGATCGCAACGCAGGAAGAGATGGTGGCAGCCAAAGTACCGCTCGG
ATACAGAGATCAGTGCGCTCATCTCCTGATGCCGCTCAACAAATGTCGCCAGGCTGAGTTCTTCCTCCCG
TGGAAGTGCGAGGACGAGCGCCACGTGTACGAGAAGTGCGAGTACGAGCTCGTGATGGAGAGGATGCTCG
CGATGCAGAAGATCCGCGAGGAAGAAGCCAAGGCTAAACAGAGTAAGCTACAAGGGAACGGTGTTCCTCT
TATCCCTAAGACCGCTAATGCGTAGCCCCTCCTCGGTTCGATCTTCCAGCTTCCCGGGAATCTCTGGAAC
TGTGAAGAAGGTGGGGCTCTGCTTTTCAGTATTTTCTTCTTGTTGGTGATGAAAATTTGTTGCTACATTC
TCAGATGTTCAAAGATTATCTCTCTTTTCGTTTTTTTTCTTCCTCTTGTTTAACTTTGTGAAACTGTTTC
ACAGAAAGAAAAAAAATAAGATGCAAACACTCATCTTTTTGTTCGTTTTTCTATCTTTAATCTTTGAGAG
AGAGAAAATGGAACATATTATATACAATATAAACAATTTCATCGAGTTAAATTTATTCAGCCAATTATAT
TTAATATAGACAA