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Detail for ZS11_A06G44510.t1

Genome:
ZS11: ZS11_A06G44510.t1
ZS11_v0: BnaA06T0415100ZS
WE: WE_A06G48200.t1
WE_v0: BnaA02T0308000WE
Darmor: C07p31220.1_BnaDAR
BH: BnaA06T396500BH
Quinta: BnaC07T0240500QU
ZS2: BnaA06T378400ZS2
SW: BnaA06T406500SW
Express61: C09p023750.1_BnaEXP
Xiaoyun: BnaA06G0442900XY
P202: BnaC07G069210P202.1
BL: BnaA06T396500BH
TA: BnaA06T381100TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g36910D
RB: BnaA06T397300RB
No2127: BnaC02T0372000NO
P130: BnaC02G053560P130.1
Length: 712
KOG ID: KOG4205
KOG E-value: Not available
KOG Score: 563.0
KOG Annotation: RNA processing and modification
Biological Process: -
Cellular Component: -
Molecular Function: GO:0003676(nucleic acid binding),GO:0003723(RNA binding)
KEGG Ortholog: K14411 MSI; RNA-binding protein Musashi
NR Protein: VDD30526.1
NR E-value: 5.900000e-228
NR Score: 795.8
NR Annotation: VDD30526.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: Q9FGK0|NDUB8_ARATH
SwissProt E-value: 9.890000e-67
SwissProt Score: 218.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1
CDS Sequence (2169 bp)
ATGGGAAGCTTATTCATCCCACGTTGCTTCTTGTTATTCTTGTTCTTGTTTCAAGGAGCGTTTGCAGCTG
CAGGGAAGATATGGAGCAGAACAGAGATGGTGGAGATGGCTGGCTACGGTGAACAAAAACTCTCCTCCGT
GATCATCACCGGATCTCTTCTATGCGACAACACTTCGCGTCCTCACCTTCCCTCTATAGCTATTCCAGGC
GCCACTGTTGCCATCAAGTGCCACACTGGTTACAAAAGGAGATCCAAATGGATTAAAGCTGTTACTGATG
ATTTGGGAGAGTTTGAAATCGATCTCCCTTCCCAACTCCACGCAATCCCCGACATGGAAAACACCAAAGA
CACAAATGAAATTTTGCTGATGTCTCTAGAGTTTGATCAACAGAAGGATGAAACTCTGAGGCAAGTCAGG
ACTCTGACGCTTTGGGCTTTTGGATTTCAATCTCCTCTCTTCTCCGTTTTCTTAAACTTTCGGAATACAG
GATCGTGGGTCGATCGGTTCACAGAATCCGATCAAGACCCAGCTTTTCGTTTTCATCGTTACATCCTTTT
TGCTTTCCGTAAAGAATGGATATGGAGTCAGAGCTTCGGCGAGGTTTTGGAGGCTGTCATCATGAAGGAT
CGTGCCACTGGTCGTGCTCGTGGCTTTGGTTTCCTTGTCTTCGCTGATCCCAATGTTGCCGAGAGAGTCG
TCTTGCTCAGACACGTCATCGATGGTAAACTTGTTGAGGCGAAGAAGGCAGTTCCAAGAGATGATCACAA
GAGTAACAGTTGTCTCCAGGGATCACCACCTGGTCCAGCTAACAGTAAAAAGATCTTTGTTGGAGGTTTG
GCTTCATCCGTTACAGAGGCTGAGTTCAAGAAGTACTTTTCTCAGTTTGGGACCATCACTGACGTTGTGG
TGATGTATGACCACCGAACACAGAGACCGAGAGGCTTTGGGTTCATCTCTTATGAATCAGAGGACGCTGT
AGACAGAGTTTTGCGGAGGACGTTCCACGAACTCAATGGGAAGATGGTGGAAGTCAAACTGGCTGTTCCC
AAGGACCCAATCCGGAACCAAATGAATGTCAATGGCTTTGGGAGTGGTAGAATCAGTGCATTGCTGATGA
ACGAGTACTCACAAGGGTTCAGCACGAGTCCAGTCTCCAGTTATGGAGTGAAACCTGAAGTTAGGTACAG
TCCAGGAGTAGTTAATAGGGGCGGATTCTCACCTTTTGGACATGGATATGGGATTGATCTGAATTTCGAG
CAAGACCAGACTCAGAGCTATGGATCTGGCTCCAGTGCAGGCTTTGGAAGGCCCTTTAGCCCAGGATATA
CTCCGACCCTTAGCAGAGCTAACGGTTCTGTGCTAAATGCAGCAGCAAAGAACCATCTATGGGGGAATAG
TGGTGGTCTAGGTTACATGTCAAACTCACCAGTCTCTAGAAGCAGCTTCAATGGAAACTCAGGAATGTCT
TCACTAGGCAGCATTGGAGACAACTGGGGAGGAGCGGGTGCACGTGCACGTAATAGCTACCGCAGTGAGG
GAGGAGGCTTAGGATTAGAAGCAATAAGAGGAGTTCATGTTGGTGTTTACAGCAGCGGCTCAAACAGCTT
GGAGGCAGACTCTTTGTACAGTGACTCGGCGTGGCTTTCGCTGCCTGCAAAGGCGGAGGAAAGATTGGGA
ATGGGAGCATTTGACTTCATGTCTAGAGGACCGGCTGGATACATCAACAGGCAACCAAACGGAGAAAACT
CCGAAACGAAAATGGCAGGAAGATTGAGCGGTGTGGCGTCAAGGCTAATGGGTGGAAACGGCGTCGTTGC
ACGATCAAACGCCTCATCTCTCCGCCAACGCGCCGGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCC
GATAAGCCTCTTTCGGTTAACGACGAGCTGATGTGGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTG
ATCGAATTGCTGATACCGTTGGGAAGTATGAAGCATTGGGATGGTTGTGTGGCGGTTTAGGCTTCTTTGC
GACTCTCGGTTTGCTCGCTGTTGTGAATGATAAAGCTTCCAAGGTTCCTTTTACACCACGAGTGTATCCG
TATGACAACCTGAGAGTGGAGCTTGGTGGAGAGCCATAG
Upstream Sequence
ATGGGAAGCTTATTCATCCCACGTTGCTTCTTGTTATTCTTGTTCTTGTTTCAAGGAGCGTTTGCAGCTG
CAGGGAAGATATGGAGCAGAACAGAGATGGTGGAGATGGCTGGCTACGGTGAACAAAAACTCTCCTCCGT
GATCATCACCGGATCTCTTCTATGCGACAACACTTCGCGTCCTCACCTTCCCTCTATAGCTATTCCAGGC
GCCACTGTTGCCATCAAGTGCCACACTGGTTACAAAAGGAGATCCAAATGGATTAAAGCTGTTACTGATG
ATTTGGGAGAGTTTGAAATCGATCTCCCTTCCCAACTCCACGCAATCCCCGACATGGAAAACACCAAAGA
CACAAATGAAATTTTGCTGATGTCTCTAGAGTTTGATCAACAGAAGGATGAAACTCTGAGGCAAGTCAGG
ACTCTGACGCTTTGGGCTTTTGGATTTCAATCTCCTCTCTTCTCCGTTTTCTTAAACTTTCGGAATACAG
GATCGTGGGTCGATCGGTTCACAGAATCCGATCAAGACCCAGCTTTTCGTTTTCATCGTTACATCCTTTT
TGCTTTCCGTAAAGAATGGATATGGAGTCAGAGCTTCGGCGAGGTTTTGGAGGCTGTCATCATGAAGGAT
CGTGCCACTGGTCGTGCTCGTGGCTTTGGTTTCCTTGTCTTCGCTGATCCCAATGTTGCCGAGAGAGTCG
TCTTGCTCAGACACGTCATCGATGGTAAACTTGTTGAGGCGAAGAAGGCAGTTCCAAGAGATGATCACAA
GAGTAACAGTTGTCTCCAGGGATCACCACCTGGTCCAGCTAACAGTAAAAAGATCTTTGTTGGAGGTTTG
GCTTCATCCGTTACAGAGGCTGAGTTCAAGAAGTACTTTTCTCAGTTTGGGACCATCACTGACGTTGTGG
TGATGTATGACCACCGAACACAGAGACCGAGAGGCTTTGGGTTCATCTCTTATGAATCAGAGGACGCTGT
AGACAGAGTTTTGCGGAGGACGTTCCACGAACTCAATGGGAAGATGGTGGAAGTCAAACTGGCTGTTCCC
AAGGACCCAATCCGGAACCAAATGAATGTCAATGGCTTTGGGAGTGGTAGAATCAGTGCATTGCTGATGA
ACGAGTACTCACAAGGGTTCAGCACGAGTCCAGTCTCCAGTTATGGAGTGAAACCTGAAGTTAGGTACAG
TCCAGGAGTAGTTAATAGGGGCGGATTCTCACCTTTTGGACATGGATATGGGATTGATCTGAATTTCGAG
CAAGACCAGACTCAGAGCTATGGATCTGGCTCCAGTGCAGGCTTTGGAAGGCCCTTTAGCCCAGGATATA
CTCCGACCCTTAGCAGAGCTAACGGTTCTGTGCTAAATGCAGCAGCAAAGAACCATCTATGGGGGAATAG
TGGTGGTCTAGGTTACATGTCAAACTCACCAGTCTCTAGAAGCAGCTTCAATGGAAACTCAGGAATGTCT
TCACTAGGCAGCATTGGAGACAACTGGGGAGGAGCGGGTGCACGTGCACGTAATAGCTACCGCAGTGAGG
GAGGAGGCTTAGGATTAGAAGCAATAAGAGGAGTTCATGTTGGTGTTTACAGCAGCGGCTCAAACAGCTT
GGAGGCAGACTCTTTGTACAGTGACTCGGCGTGGCTTTCGCTGCCTGCAAAGGCGGAGGAAAGATTGGGA
ATGGGAGCATTTGACTTCATGTCTAGAGGACCGGCTGGATACATCAACAGGCAACCAAACGGAGAAAACT
CCGAAACGAAAATGGCAGGAAGATTGAGCGGTGTGGCGTCAAGGCTAATGGGTGGAAACGGCGTCGTTGC
ACGATCAAACGCCTCATCTCTCCGCCAACGCGCCGGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCC
GATAAGCCTCTTTCGGTTAACGACGAGCTGATGTGGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTG
ATCGAATTGCTGATACCGTTGGGAAGTATGAAGCATTGGGATGGTTGTGTGGCGGTTTAGGCTTCTTTGC
GACTCTCGGTTTGCTCGCTGTTGTGAATGATAAAGCTTCCAAGGTTCCTTTTACACCACGAGTGTATCCG
TATGACAACCTGAGAGTGGAGCTTGGTGGAGAGCCATAG
Downstream Sequence
GTACCCTACCTATTCACGAGTCTCTCTATATGTTTTATTCTTCTATCAGAATACTTAACA
TGATTAATCAATCCTCACAGGCGCCACTGTTGCCATCAAGTGCCACACTGGTTACAAAAG
GAGATCCAAATGGATTAAAGCTGTTACTGATGATTTGGGAGAGTTTGAAATCGATCTCCC
TTCCCAACTCCACGCAATCCCCGACATGGAAAACACGTGCGTCGTTAAGCCAGTACATGT
CCCTAAGCTATATAGATGCAATCACAGGTCGAGCAATACACACAAACGCATCAACCTTGT
TTCCTCTACCAACGGCTTCCGAGTCTACACCTCAGGGAAGATCAAGTTACAGGGTCACAG
TTCAAGATCATAGCAAGCTGCATGGTGTCAATATTTTAAACTAAAGATTTAAAAATTAAA
CAGTATAATTTCTTGTTTAGCTGGCGCTTCAGTCACAGAACCGAGTTAGAGTCTCTCTCT
ACATTGTTATTCATGTTTCTACATTGTTGTTGATGTTTCCCACTATGTAATTAAGAACGA
TGGTTGCATCATATGTGTAAAGGTTCTCATGAGATTGATACAAAACAGCAGTGTGGTCAC
ATTTGAATATTTGAGATGAAATGTAACAGCAAAGACACAAATGAAATTTTGCTGATGTCT
CTAGAGTTTGATCAACAGAAGGATGAAACTCTGAGGCAAGTCAGGACTCTGACGCTTTGG
GGTGAGTTTCAGAGACAATGTAGGTAGCAATATCAGCACAACAAGTAAGGTTATCAGCTT
TATCATCAGGGAGAAATGAGAGACTCTGATAGATAGAGAGAAGAAGCAGAGGATAGAGAA
TAGTAATCTTTCTGCAGGCTGGTTGAAAACCTATTTGGGCTTTAGATTTTTAATAAGGGC
CAATTAGTTTTAATGGAAACATAACATAACTATTAATGAGGCTTTTCATTTAAAAAGAAG
AACATAAGCATTGTGAGCTTATGGGGCACAGTTCTTATCAAATCTTTTATTCCCGATTTA
GCAAGGCTGCTTAATATACGACTTAGGGTACTAGTAGAAAAACCTTTTACTTGAGAGCAT
GATTATCGGGATTCTGAGAGCATGATTATCGGGATTCTTAGGGTGGAGTTCTTAGCGGAA
TATAAAAATTTGTCTCTTAATTTTTAACTAAAAAGTTAAGAACCGGTTCTTAAATAAGAT
ATTTTAAAACTGGTTCTTAGTTTTTTAAATTAAAAGTTAAGAGACGAGTTTTTATATTAT
GCTAAGAATCTCACCTTAAAAACCTCCAAATAATCAGATGTTCTGAGAGATCATTAGTAA
AACATGCTATAAGAGGATATTCAGTTGTTCAGTCGCATTAGATTTAAACATTTGCTCAAT
ACGCTTTAATCCGAGAATCTAGTGGGTAATACGAATTATAAAAATGTTGGACTAGCAAAT
AAAATTAGATGATGTACCATCTATAAAAATGTTTTAAAATAGATGATGAATTATGTGATG
CATAAAACGGTGGTGGACATTTGACCTGTACAAAAATTACATCACCAAGAAATAAACAAA
GAACATAGATAATATACATATTCCTTTTGAGTAAACGATAAATTTTCTAATACCTATATG
ATAATTGGACCTGGAGAATGGAAAATGGAGAATGGTCTATAAATCACATGTTACATCTAT
TCATAATGAATAAAGATGAATGAAAAGTAAGCATTTGAAAGTTGGTAATTGTTATTTGGA
TGCTTTGTGTACTTGAAACATATCTTCCTCTCTTTTTTTTTGGAAACATATCTTCCACTT
GGTGATTGAGTTAAATTTAATATCATTTCATTACTAAACTAATATTTGTTTAAAGCAATA
TATGTACAATAAAATTCGTGGGATGCCAATCTTTATCGTCATCAACCATTCCCCCCATGT
TATTGCCCACGTTGATTCCCACAAAAGCTTTTTATAAAAAAAACTTTTCATGCCATCTTC
ATTTTATAGTAAAGCTCAAT
Pro Sequence
MGSLFIPRCFLLFLFLFQGAFAAAGKIWSRTEMVEMAGYGEQKLSSVIIT
GSLLCDNTSRPHLPSIAIPGATVAIKCHTGYKRRSKWIKAVTDDLGEFEI
DLPSQLHAIPDMENTKDTNEILLMSLEFDQQKDETLRQVRTLTLWAFGFQ
SPLFSVFLNFRNTGSWVDRFTESDQDPAFRFHRYILFAFRKEWIWSQSFG
EVLEAVIMKDRATGRARGFGFLVFADPNVAERVVLLRHVIDGKLVEAKKA
VPRDDHKSNSCLQGSPPGPANSKKIFVGGLASSVTEAEFKKYFSQFGTIT
DVVVMYDHRTQRPRGFGFISYESEDAVDRVLRRTFHELNGKMVEVKLAVP
KDPIRNQMNVNGFGSGRISALLMNEYSQGFSTSPVSSYGVKPEVRYSPGV
VNRGGFSPFGHGYGIDLNFEQDQTQSYGSGSSAGFGRPFSPGYTPTLSRA
NGSVLNAAAKNHLWGNSGGLGYMSNSPVSRSSFNGNSGMSSLGSIGDNWG
GAGARARNSYRSEGGGLGLEAIRGVHVGVYSSGSNSLEADSLYSDSAWLS
LPAKAEERLGMGAFDFMSRGPAGYINRQPNGENSETKMAGRLSGVASRLM
GGNGVVARSNASSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTAFPE
PCIDRIADTVGKYEALGWLCGGLGFFATLGLLAVVNDKASKVPFTPRVYP
YDNLRVELGGEP
mRNA Sequence
ATGGGAAGCTTATTCATCCCACGTTGCTTCTTGTTATTCTTGTTCTTGTTTCAAGGAGCGTTTGCAGCTG
CAGGGAAGATATGGAGCAGAACAGAGATGGTGGAGATGGCTGGCTACGGTGAACAAAAACTCTCCTCCGT
GATCATCACCGGATCTCTTCTATGCGACAACACTTCGCGTCCTCACCTTCCCTCTATAGCTATTCCAGGC
GCCACTGTTGCCATCAAGTGCCACACTGGTTACAAAAGGAGATCCAAATGGATTAAAGCTGTTACTGATG
ATTTGGGAGAGTTTGAAATCGATCTCCCTTCCCAACTCCACGCAATCCCCGACATGGAAAACACCAAAGA
CACAAATGAAATTTTGCTGATGTCTCTAGAGTTTGATCAACAGAAGGATGAAACTCTGAGGCAAGTCAGG
ACTCTGACGCTTTGGGCTTTTGGATTTCAATCTCCTCTCTTCTCCGTTTTCTTAAACTTTCGGAATACAG
GATCGTGGGTCGATCGGTTCACAGAATCCGATCAAGACCCAGCTTTTCGTTTTCATCGTTACATCCTTTT
TGCTTTCCGTAAAGAATGGATATGGAGTCAGAGCTTCGGCGAGGTTTTGGAGGCTGTCATCATGAAGGAT
CGTGCCACTGGTCGTGCTCGTGGCTTTGGTTTCCTTGTCTTCGCTGATCCCAATGTTGCCGAGAGAGTCG
TCTTGCTCAGACACGTCATCGATGGTAAACTTGTTGAGGCGAAGAAGGCAGTTCCAAGAGATGATCACAA
GAGTAACAGTTGTCTCCAGGGATCACCACCTGGTCCAGCTAACAGTAAAAAGATCTTTGTTGGAGGTTTG
GCTTCATCCGTTACAGAGGCTGAGTTCAAGAAGTACTTTTCTCAGTTTGGGACCATCACTGACGTTGTGG
TGATGTATGACCACCGAACACAGAGACCGAGAGGCTTTGGGTTCATCTCTTATGAATCAGAGGACGCTGT
AGACAGAGTTTTGCGGAGGACGTTCCACGAACTCAATGGGAAGATGGTGGAAGTCAAACTGGCTGTTCCC
AAGGACCCAATCCGGAACCAAATGAATGTCAATGGCTTTGGGAGTGGTAGAATCAGTGCATTGCTGATGA
ACGAGTACTCACAAGGGTTCAGCACGAGTCCAGTCTCCAGTTATGGAGTGAAACCTGAAGTTAGGTACAG
TCCAGGAGTAGTTAATAGGGGCGGATTCTCACCTTTTGGACATGGATATGGGATTGATCTGAATTTCGAG
CAAGACCAGACTCAGAGCTATGGATCTGGCTCCAGTGCAGGCTTTGGAAGGCCCTTTAGCCCAGGATATA
CTCCGACCCTTAGCAGAGCTAACGGTTCTGTGCTAAATGCAGCAGCAAAGAACCATCTATGGGGGAATAG
TGGTGGTCTAGGTTACATGTCAAACTCACCAGTCTCTAGAAGCAGCTTCAATGGAAACTCAGGAATGTCT
TCACTAGGCAGCATTGGAGACAACTGGGGAGGAGCGGGTGCACGTGCACGTAATAGCTACCGCAGTGAGG
GAGGAGGCTTAGGATTAGAAGCAATAAGAGGAGTTCATGTTGGTGTTTACAGCAGCGGCTCAAACAGCTT
GGAGGCAGACTCTTTGTACAGTGACTCGGCGTGGCTTTCGCTGCCTGCAAAGGCGGAGGAAAGATTGGGA
ATGGGAGCATTTGACTTCATGTCTAGAGGACCGGCTGGATACATCAACAGGCAACCAAACGGAGAAAACT
CCGAAACGAAAATGGCAGGAAGATTGAGCGGTGTGGCGTCAAGGCTAATGGGTGGAAACGGCGTCGTTGC
ACGATCAAACGCCTCATCTCTCCGCCAACGCGCCGGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCC
GATAAGCCTCTTTCGGTTAACGACGAGCTGATGTGGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTG
ATCGAATTGCTGATACCGTTGGGAAGTATGAAGCATTGGGATGGTTGTGTGGCGGTTTAGGCTTCTTTGC
GACTCTCGGTTTGCTCGCTGTTGTGAATGATAAAGCTTCCAAGGTTCCTTTTACACCACGAGTGTATCCG
TATGACAACCTGAGAGTGGAGCTTGGTGGAGAGCCATAG