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Detail for ZS11_A07G29550.t1

Genome:
ZS11: ZS11_A07G29550.t1
ZS11_v0: BnaA07T0250300ZS
WE: WE_A07G30210.t1
WE_v0: BnaA07T0246500WE
Darmor: A07p29260.1_BnaDAR
BH: BnaC06T304700BH
Quinta: BnaA07T0208600QU
ZS2: BnaA07T253000ZS2
SW: BnaA07T264200SW
Express61: A07p023150.1_BnaEXP
Xiaoyun: BnaA07G0250200XY
P202: BnaA07G022350P202.3
BL: BnaC06T304700BH
TA: BnaA07T255200TA
Da-Ae: Not available
RB: BnaA07T269200RB
No2127: BnaC06T0262200NO
P130: BnaA07G027120P130.3
Length: 568
KOG ID: KOG1223
KOG E-value: Not available
KOG Score: 924.0
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013743339.1
NR E-value: Not available
NR Score: 1117.1
NR Annotation: XP_013743339.1 isochorismate synthase 1, chloroplastic [Brassica napus]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1011.0
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (1731 bp)
ATGGCCTCACTTCATCTTTCTTCTCGGTTTCTGGCCACAAACACTAAAAAACATAGCTCCATCTCCATCT
CTCATCATTACTCTCCAACTCCATTCACCGGATTATTCTCCCGCAAGAAGTTTATGTCCTGTTCGATGTC
TATGAACGGATGCGAAGGGGATTTCAAGACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTT
TTATCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTCTCCGAGCTCAAATCTCAACCTCCGCCGT
TTTCCTCCGGCGTCGTCCGGTTACAGGTACCAATCGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGC
CCAGGACGAGATCCACCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTC
GACTTAGCGAGCGACAACGAGAACGCGAACCGAAACGGATCGGATCGTGATCTGGTTAGCGTCGCCGGAA
TCGGCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTT
TCTATCGCCTAACTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCT
GTGGAGTGGGAGCCCTTTGGTGCATTTTACTTTTCAGTCCCTCAGGTTGAGTTTAATGAGTTTGGTGGAA
GCTCAATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGC
ACTTCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGGAGGGAGTCTCTTGGAGTATCT
GTGCTTAGCAAGAATCATGTTCCTACAAAAGGGGCGTATTACCCTGCTGTTGAGAAGGCTTTGGAGATTA
TAAAGCAGAAGAGTTCGTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGA
CATTGATCCCATTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAA
CCACCAGGTGCACCAGCTTTTATTGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCT
GCAGTGAAGCTTTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGA
TTTATTAACCAGCCCCAAAGACGACCTTGAGTTCTCTATTGTACGTGAGAATATCAGAGAAAAGCTAAAC
TCTATATGTGACAAGGTAGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCACCTGT
ATTCTCAATTGGCGGGGAGGCTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAAC
TCCAGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGA
GGAATGTACGCTGGACCTGTCGGTTTCTTTGGTGGTGATGAGAGTGAGTTTGCAGTTGGTATCAGATCAG
CTCTAGTCGAGAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAAC
CTCAGAGTGGAATGAGCTTGATCTAAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACA
ACAACAACTCTGCAGCCAATTAATTGA
Upstream Sequence
atcaaataTCTACTTGAACCAAAGAGAaGAACAAAAACTATATAGTATATTCCTcCACACAGAAAAAAAG
AAATAAACAAAATATATAAATAAATCACTCACCATcTcTCTTTTGTTCGTTctctaagcAATCTCCAATG
GCCTCACTTCATCTTTCTTCTCGGTTTCTGGCCACAAACACTAAAAAACATAGCTCCATCTCCATCTCTC
ATCATTACTCTCCAACTCCATTCACCGGATTATTCTCCCGCAAGAAGTTTATGTCCTGTTCGATGTCTAT
GAACGGATGCGAAGGGGATTTCAAGACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTA
TCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTCTCCGAGCTCAAATCTCAACCTCCGCCGTTTT
CCTCCGGCGTCGTCCGGTTACAGGTACCAATCGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCA
GGACGAGATCCACCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGAC
TTAGCGAGCGACAACGAGAACGCGAACCGAAACGGATCGGATCGTGATCTGGTTAGCGTCGCCGGAATCG
GCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTTTCT
ATCGCCTAACTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCTGTG
GAGTGGGAGCCCTTTGGTGCATTTTACTTTTCAGTCCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGCT
CAATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGCACT
TCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGGAGGGAGTCTCTTGGAGTATCTGTG
CTTAGCAAGAATCATGTTCCTACAAAAGGGGCGTATTACCCTGCTGTTGAGAAGGCTTTGGAGATTATAA
AGCAGAAGAGTTCGTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGACAT
TGATCCCATTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAACCA
CCAGGTGCACCAGCTTTTATTGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCA
GTGAAGCTTTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGATTT
ATTAACCAGCCCCAAAGACGACCTTGAGTTCTCTATTGTACGTGAGAATATCAGAGAAAAGCTAAACTCT
ATATGTGACAAGGTAGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCACCTGTATT
CTCAATTGGCGGGGAGGCTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCC
AGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGAGGA
ATGTACGCTGGACCTGTCGGTTTCTTTGGTGGTGATGAGAGTGAGTTTGCAGTTGGTATCAGATCAGCTC
TAGTCGAGAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAACCTC
AGAGTGGAATGAGCTTGATCTAAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACAACA
ACAACTCTGCAGCCAATTAATTGAAGATGAGTAACAACATTTGTTTTTCTTTGTATTATATGGGAATGGG
GTAATAGAGAATCAGTGTGTATTTGTCTTCGTTGTAAATAGAAATAATAATTGTTGAAAGTTCGAAGGGG
TTTTTCTAATTATATCTTCCTTGGTTGTAACTAGGCCA
Downstream Sequence
GGTTTTTTTTCTCTTTCTTTTAAGTTCTGTTCTGCTCTTGTCTAATTTTTTTTGTCAACG
CTCTCTTGTTTTTTTCAAGAACGTAAGATTGCATTATTAACTGAGAAACCTTCTTGGATG
GTTGCAGAAGTTTATGTCCTGTTCGATGTCTATGAACGGATGCGAAGGGGATTTCAAGAC
GCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTATCTCCGACAGCCGCCAC
TGAGAGGCTAATCTCCGCCGTCTCCGAGCTCAAATCTCAACCTCCGCCGTTTTCCTCCGG
CGTCGTCCGGTTACAGGTACATAGTATATAGACTATCCTCTATTTTTTTAATAAAGATAG
CCAGATTTCACGTCAGTGAAAGAATCCGATCATGCCACGTGGTTTCTCTGGATTGGTTTA
TGTTAATATCGCTCTCTGATTCGTTTCCTTGCCGTATCGTAAAGCCTAATCATTTAAGTT
TGCTTCTTTTAGCATGATCCGAATCATTTAGTGGGTTTAGACGATAATTAAATACTCCTT
ATATTTCTAGAGTCTTTACACACATACATCATTTTCTATAATTAAATTTTCTATAGCTGT
ATCCCAGTGCTTATTATCATTGTTATAAAAGGTTAGTGCTTTTGGAATTGGTTGTGTAAG
TGTAATCATAGACAAAAAAAGAAGAAGCTATGGCTAATAATGACCAAGACAGAAGAAGAA
GAAGATATGAcTAATCTATCACTATCACTAGTACTATTATTATTAGTTTATGAATCATGC
ACATAGACGTATTGAGTCGTACAAGAATCTAATAATCGAATTATTCATAACGCGATGGAC
GTAGAAAAAAAAAAGAATAATTTTCCCTTGAGTCAATTCGTTCTAACTAATCCACCGTTA
ATTAGATTTGATCATTTATTAAGAATATGTGGGCCCAGTAGAACCGAACATTTACCCGCG
CAATATCTCAAGAACCATTAATTTAATTTCGGTTTGGTTCGGTTTAGGTACCAATCGACC
AGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGGACGAGATCCACCCTCGCTGCTTCT
TCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGACTTAGCGAGCGACAACG
AGAACGCGAACCGAAACGGATCGGATCGTGATCTGGTTAGCGTCGCCGGAATCGGCTCCG
CAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGT
AAAGTAATAAGCTTTATCTCGTTTCGTTTCTCAGTTATATCTGATTGTTGAGTGGTTTAA
CGTGTTTTGAAGGTTTCTATCGCCTAACTCGCCTCTGATTCGCGCCTATGGAGGCATGCG
GTTTGATCCTAACGGCAAGATCTCTGTGGAGTGGGAGCCCTTTGGTGCATTTTACTTTTC
AGTCCCTCAGGTAACCTTAAAGTTTTGATTTTTATTTTTTTTATATAGAGGACGAGACTT
GTTTTGACTAATTGGTTACTTCAAGGACAGGTTGAGTTTAATGAGTTTGGTGGAAGCTCA
ATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATT
GAAGCACTTCAGGAGACTATGCTTCAGGTTTTTAACATAGATCCTTTCTCGGAGTTATTG
AATGGGACTCTTTATGCTAATGAGAGCTTTGTTTTGTGTGTCAGGTTTCTTCTGTTGTGG
TGAGGTTACGGAGGGAGTCTCTTGGAGTATCTGTGCTTAGCAAGAATCATGTTCCTACAA
AAGGGGCGTATTACCCTGCTGTTGAGAAGGCTTTGGAGATTATAAAGCAGAAGAGTTCGT
CTCTCAGCAAGGTAGTTTAGTGACTTCGTGTTTGTATCTGTTATTACATAGTTATGGTTC
CCGTTTTAACTGATTGTTTTTTTGTTTGTGAAATCAGGTCGTGCTTGCTCGCAACAGCAG
AGTTATAACAGATACCGACA
Pro Sequence
MASLHLSSRFLATNTKKHSSISISHHYSPTPFTGLFSRKKFMSCSMSMNG
CEGDFKTPLGTVETRTMSTVLSPTAATERLISAVSELKSQPPPFSSGVVR
LQVPIDQQIGAIDWLQAQDEIHPRCFFSRRSDVGRPDLLLDLASDNENAN
RNGSDRDLVSVAGIGSAVFFRDLDAFSHDDWRSIRRFLSPNSPLIRAYGG
MRFDPNGKISVEWEPFGAFYFSVPQVEFNEFGGSSMLAATLAWDDELSWT
LENAIEALQETMLQVSSVVVRLRRESLGVSVLSKNHVPTKGAYYPAVEKA
LEIIKQKSSSLSKVVLARNSRVITDTDIDPIAWLAQLQSEGHDAYQFCLQ
PPGAPAFIGNTPERLFQRNQLGVCSEALAATRPRAASTARDMEIERDLLT
SPKDDLEFSIVRENIREKLNSICDKVVVKPQKTVRKLARVQHLYSQLAGR
LRREDDEFDILAALHPTPAVCGLPAEEARLLIKEIESFDRGMYAGPVGFF
GGDESEFAVGIRSALVEKGLGALIYAGTGIVAGSNPTSEWNELDLKISQF
TKSIESEATTTTTLQPIN
mRNA Sequence
atcaaataTCTACTTGAACCAAAGAGAaGAACAAAAACTATATAGTATATTCCTcCACACAGAAAAAAAG
AAATAAACAAAATATATAAATAAATCACTCACCATcTcTCTTTTGTTCGTTctctaagcAATCTCCAATG
GCCTCACTTCATCTTTCTTCTCGGTTTCTGGCCACAAACACTAAAAAACATAGCTCCATCTCCATCTCTC
ATCATTACTCTCCAACTCCATTCACCGGATTATTCTCCCGCAAGAAGTTTATGTCCTGTTCGATGTCTAT
GAACGGATGCGAAGGGGATTTCAAGACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTA
TCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTCTCCGAGCTCAAATCTCAACCTCCGCCGTTTT
CCTCCGGCGTCGTCCGGTTACAGGTACCAATCGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCA
GGACGAGATCCACCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGAC
TTAGCGAGCGACAACGAGAACGCGAACCGAAACGGATCGGATCGTGATCTGGTTAGCGTCGCCGGAATCG
GCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTTTCT
ATCGCCTAACTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCTGTG
GAGTGGGAGCCCTTTGGTGCATTTTACTTTTCAGTCCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGCT
CAATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGCACT
TCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGGAGGGAGTCTCTTGGAGTATCTGTG
CTTAGCAAGAATCATGTTCCTACAAAAGGGGCGTATTACCCTGCTGTTGAGAAGGCTTTGGAGATTATAA
AGCAGAAGAGTTCGTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGACAT
TGATCCCATTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAACCA
CCAGGTGCACCAGCTTTTATTGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCA
GTGAAGCTTTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGATTT
ATTAACCAGCCCCAAAGACGACCTTGAGTTCTCTATTGTACGTGAGAATATCAGAGAAAAGCTAAACTCT
ATATGTGACAAGGTAGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCACCTGTATT
CTCAATTGGCGGGGAGGCTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCC
AGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGAGGA
ATGTACGCTGGACCTGTCGGTTTCTTTGGTGGTGATGAGAGTGAGTTTGCAGTTGGTATCAGATCAGCTC
TAGTCGAGAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAACCTC
AGAGTGGAATGAGCTTGATCTAAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACAACA
ACAACTCTGCAGCCAATTAATTGAAGATGAGTAACAACATTTGTTTTTCTTTGTATTATATGGGAATGGG
GTAATAGAGAATCAGTGTGTATTTGTCTTCGTTGTAAATAGAAATAATAATTGTTGAAAGTTCGAAGGGG
TTTTTCTAATTATATCTTCCTTGGTTGTAACTAGGCCA