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Detail for ZS11_A07G39240.t1

Genome:
ZS11: ZS11_A07G39240.t1
ZS11_v0: BnaA07T0332900ZS
WE: WE_A07G39780.t1
WE_v0: BnaA07T0327300WE
Darmor: A07p38600.1_BnaDAR
BH: BnaA07T149200BH
Quinta: BnaA07T0289000QU
ZS2: BnaA07T338300ZS2
SW: BnaC06T412100SW
Express61: A07p031420.1_BnaEXP
Xiaoyun: BnaA07G0337500XY
P202: BnaA07G028720P202.1
BL: BnaA07T149200BH
TA: BnaA07T340800TA
Da-Ae: Not available
RB: BnaA07T357600RB
No2127: BnaC05T0138000NO
P130: BnaA07G034640P130.1
Length: 76
KOG ID: KOG2435
KOG E-value: 5.340000e-31
KOG Score: 108.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K18159 NDUFAF1, CIA30; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
NR Protein: XP_018508624.1
NR E-value: 1.900000e-36
NR Score: 156.4
NR Annotation: XP_018508624.1 PREDICTED: probable complex I intermediate-associated protein 30 isoform X1 [Brassica rapa]
SwissProt Protein: Q9LQI7|CIA30_ARATH
SwissProt E-value: 9.940000e-39
SwissProt Score: 130.0
SwissProt Annotation: Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana OX=3702 GN=At1g17350 PE=1 SV=2
CDS Sequence (234 bp)
ATGTCACGGTTTAGATCATTGTGGCAAGCCTCGGTGAATGCAACAAAGAAAGCTCTAACGTGGGAACTCG
AGGAAATGGTACCGCCTGCGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCA
CCTTTATTCTGATTCTGAGTATGGAGGATTATCTTCGGCTTCATTGGAGATGAAAGATGGAGGAAATGGA
TCAGACTGCACTGccgtttag
Upstream Sequence
ATGTCACGGTTTAGATCATTGTGGCAAGCCTCGGTGAATGCAACAAAGAAAGCTCTAACGTGGGAACTCG
AGGAAATGGTACCGCCTGCGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCA
CCTTTATTCTGATTCTGAGTATGGAGGATTATCTTCGGCTTCATTGGAGATGAAAGATGGAGGAAATGGA
TCAGACTGCACTGccgtttag
Downstream Sequence
GGTATTTTCTTTTATTCTCTTTGCTGAGAGTCAAATTAACATGCTTAACACTTCTTGTAA
ATTATTGAATTTGTTGCTATTGGTTTCCTTATCTTGTTTAAAGTTGGTTTGTGTATTAAA
GAGTAACGAATACTTTATATATTCTTGTTTTGGCCTTATAATCAAATGTCTTTGCCTGGA
AAGAAAGATAATGTTTGAAGACTAgggatgacggttttacttgtaaTATGTATGCTCTTG
AGCCTTTTAGCTTTGTTTTGACGATGTACATACTTCAGCTCTAACGTGGGAACTCGAGGA
AATGGTACCGCCTGCGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAG
ATGGCACCTTTATTCTGATTCTGAGTATGGAGGTACTTAAAACACAGGTTCAGGCATCTG
CTCATATTTGATGTTGCAGAACATATGTTCTGCTTTTAAATTTTTTCTTTTATTTACACT
ACTCAATCCTCATTGATTCATATTTACAACTATTCAGGCGAAATAAGATTTCTAAATATC
TGCAGTACTTAGCCATTCCTCATGTGATCTGCTCATTGTCGTGTTGGATATTTACTTTAT
AGGATTATCTTCGGCTTCATTGGAGATGAAAGATGGAGGAAATGGATCAGACTGCACTGG
TTAGTGTATATATGATGGTCAAAtgtgcttagccttctcctttgttactcttttgcttgg
ttctgatacacccagtttgtgtaaGATAGATTTTCATATAGACTTGTCGTTTGCTCATCT
AGGGAGGCATAGAAATGTTAATTAGGATTCTCCAcaccattttttcttcagttcttgatc
tgcaatttgtttggttttagccgtttaggttcttttatgggtctctggcgaagaagttac
atgcatgaaaatgaatgtacgaggtttcttgactcttttaccattgtttctaagtaccat
tttcaccgtgtacctcctcctatgtgtgttctccgggaacctctctacggacatgagcga
aggTTCAAAATGGAGTATTAACCGGAGTGGTTTCTGTGGAATGCGCTCAAAGAAGGTTAA
ACACAAAGCTTTTTTTTCTTCTTACTAATCATCTCATCGTCAATCAAAACATAACAAATA
GCACTTTCTCTTCTTTTTTTTTTTGTAGTTTGATGGCTTTATTGATCTCGACGGGTATGA
TTCCATAGCCATGAGGCTTAAAGGAGATGGAAGATGCTACATCTCTACTGTGAGTCTCGT
GCTGACCACATAAGGTTTATTAGGAGCACACCTTTTTTTCTTTCTTAAAACTAAACCGCA
ATTTTAATTCCGATATATACAGAGAATTGGGTAAACTCGCCAGGACAAGCAGAAGATAAC
TCATGGCAAGCTTTTGTTTTTGCTCCAAAGGGAAACTGGTATACAGCTAAGGCAAGTCTC
AGACTTCTTCGACAAGGCAACTTGCGTAAAAAGAGGTTTTGTTATGTAAACCTAACCCAA
GTTTGACAATTTTTCTTTTTCAGGTTCCTCTAACTCGCTACTTGCCAACATGGAAAGGAA
ACGTGATAGATGCAGACATGGAGATGAATCCAGGCCGTGTTGTGGGTATGTCTCTGTCAG
TTAACTCACAAGGAGGTGGTTTCATTGGCGCTAAACTAGGCTCAGGCGATTTCAGAGTCG
AAATTGACTGGATCAAAGCATTGAGAATGCCATGATGAATGATGCCGACAGAAAGAAACT
GAAGTTCTCTGGTTTGGTTTACTTGTAAAACCGGGATTTGGGTTAACCGGATCAAAGTTG
GTGGACAAAAGGAAACGTTTGTGAAATGACACTTACAAGTTACAGCAAGTTGTCTTGGCT
TTAGTAGAACATAAGAGTCAATGAATAAAATTACATGGGCCATATTAAGCAAGTTGCTCA
ATTTGATCAAAACTATACCTTAAATGGACGATGAAGAGAATAAAAATAATTAAATTAAAC
TAAACTATTAGAGAACAATG
Pro Sequence
MSRFRSLWQASVNATKKALTWELEEMVPPAEKCIFKFSSKEDLKRWHLYS
DSEYGGLSSASLEMKDGGNGSDCTAV
mRNA Sequence
ATGTCACGGTTTAGATCATTGTGGCAAGCCTCGGTGAATGCAACAAAGAAAGCTCTAACGTGGGAACTCG
AGGAAATGGTACCGCCTGCGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCA
CCTTTATTCTGATTCTGAGTATGGAGGATTATCTTCGGCTTCATTGGAGATGAAAGATGGAGGAAATGGA
TCAGACTGCACTGccgtttag