SEARCH

DETAIL

Detail for ZS11_A01G00040.t1

Genome:
ZS11: ZS11_A01G00040.t1
ZS11_v0: BnaA01T0002500ZS
WE: WE_scaffold0003G03050.t1
WE_v0: Bnascaffold286T0001000WE
Darmor: A01p00110.1_BnaDAR
BH: BnaC01T002100BH
Quinta: BnaC07T0521300QU
ZS2: BnaA01T035700ZS2
SW: BnaA01T039100SW
Express61: A01p000140.1_BnaEXP
Xiaoyun: BnaA01G0001400XY
P202: BnaC01G000190P202.1
BL: BnaC01T002100BH
TA: BnaA01T034900TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g00300D
RB: BnaA01T036100RB
No2127: BnaC07T0522000NO
P130: BnaA08G014910P130.1
Length: 105
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009733(response to auxin)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K14488 SAUR; SAUR family protein
NR Protein: XP_009134559.1
NR E-value: 3.700000e-54
NR Score: 215.7
NR Annotation: XP_009134559.1 PREDICTED: auxin-induced protein 15A-like [Brassica rapa]
SwissProt Protein: O65695|SAU50_ARATH
SwissProt E-value: 8.900000e-54
SwissProt Score: 166.0
SwissProt Annotation: Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1
CDS Sequence (322 bp)
ATGGCGGTAAAGAGATCTTCTAAGGTAACACAAACAGCAATGTTAAAGCAAATCCTCAAGAGGTGCTCGA
GCTTAGGTAAGAAACAATGCTACGACGAGGAAGGCCTCCCTCTTGACGTACCAAAGGGACATTTTCCTGT
TTACGTAGGCGAAAAGCGTACGAGGTACATCGTACCAATCACCTTCTTGTCTCATCCCGAATTTCTGATC
CTTCTTCAACAAGCAGAGGAAGAGTTCGGTTTCCACCACGACATGGGTGGACTCACCATCCCTTGTGAAG
AAGTCGTTTTTCTCTCTCTAACATCCATGATCCGATAA
Upstream Sequence
AAATAATAGTAATATTGCTTTAGCATTCCATCCTCATCCTCCTCCATAAATAACCCCTTTTCGCAACCTA
TCTCTCATCAAACACTTCTCTTTTCTCCTCCAAATTGTCTCCTCGCTCCCTCATCTCATCAAGAAGTCAA
ACACTAGCTAAAACTAAAACAATGGCGGTAAAGAGATCTTCTAAGGTAACACAAACAGCAATGTTAAAGC
AAATCCTCAAGAGGTGCTCGAGCTTAGGTAAGAAACAATGCTACGACGAGGAAGGCCTCCCTCTTGACGT
ACCAAAGGGACATTTTCCTGTTTACGTAGGCGAAAAGCGTACGAGGTACATCGTACCAATCACCTTCTTG
TCTCATCCCGAATTTCTGATCCTTCTTCAACAAGCAGAGGAAGAGTTCGGTTTCCACCACGACATGGGTG
GACTCACCATCCCTTGTGAAGAAGTCGTTTTTCTCTCTCTAACATCCATGATCCGATAAGACGCAGAGAG
AGTTTTACATTATGATCAAGACTAAGATTCTTTTCTTTTTGCCTTTGGATAATAATTTGTTATCCAAATG
GTTCTTTTTTCCTGGACTAATTCTAAACCTGTAAGATCCACCTAAAAGATCATTCTCTACACGGATCATG
TAAATCtccatcgggttttaattagttcattagttccccctaatggggTTAGTATTCGATGGAACATGTA
TGTTTTTTTTTCCATTGAGCTGATAAGTGGTGGTTTGCGCTAATAGATGATTAATACCGCAAGTTGTATT
GGCCATTTTTTTTTAAGGTTTGAATATTGTGATCGTTCGAGTTCCTTGAAACGAAGAAATGTTCAATCTT
TGTATGAGTCTTTTCAATGTTTTTTTTCTCGGATGTAAGTATTTTTTTTTGAGATTTGTGCGAGTGATGT
AGTATAAATTAAAGCTTCCATTCTGTGTTTTATTAAATTAATAATTACGTTTATTATATGTGGC
Downstream Sequence
GACGCAGAGAGAGTTTTACATTATGATCAAGACTAAGATTCTTTTCTTTTTGCCTTTGGA
TAATAATTTGTTATCCAAATGGTTCTTTTTTCCTGGACTAATTCTAAACCTGTAAGATCC
ACCTAAAAGATCATTCTCTACACGGATCATGTAAATCtccatcgggttttaattagttca
ttagttccccctaatggggTTAGTATTCGATGGAACATGTATGTTTTTTTTTCCATTGAG
CTGATAAGTGGTGGTTTGCGCTAATAGATGATTAATACCGCAAGTTGTATTGGCCATTTT
TTTTTAAGGTTTGAATATTGTGATCGTTCGAGTTCCTTGAAACGAAGAAATGTTCAATCT
TTGTATGAGTCTTTTCAATGTTTTTTTTCTCGGATGTAAGTATTTTTTTTTGAGATTTGT
GCGAGTGATGTAGTATAAATTAAAGCTTCCATTCTGTGTTTTATTAAATTAATAATTACG
TTTATTATATGTGGCACCTGAACATCTTAAAATGACAATATATTATCCACGATAAACAAC
GAATAAATTGATCCAACCGCAACACAGAAGATCTCAATTTAGACGACTCAATATTATGTG
TTCAAAAAAAAAAGACGACTCAATATTATTAAAAAATATATATTCATGAGTTTCTTGAAA
AAGTTACGTGCTGGAGGAAAATACAATTGTTTTCTTTTCTTGAAACAAGGAAAATATAAT
TGCTAGAGTCGAAATATCAAACCTAGAGAGTAATACTACTCTACGCATCTTTATTCTTCT
TCTAAATTAGGTTTCTATAATCCGACTGAGTTTTTTTTTTTTGACTAAAAGCATATTTGT
CTCTAGTAATTGAAGTTGGTCATATATATAATAGTTTAGTATTCATTGGAATTAACTTAA
TATGCCTTGTAGTTTTAGCTATGATTTTTTCTTTTGAAAAATTGAATGCACTTACTTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT
TCCTCTTTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCCTCTCTCTATCGCAAACCCAGCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTTGCTTTTCCTACGAGCCACAAGTCGAATATGATAGCAACTACTCTTCTTAAT
GCACATACCCTCTTTTTTTCCTACATACTTTTTATCTAATTAACTCCGGCCCTCACTGAA
GAGTATCTTTCCGTTCAAAGCAATTTTATGTTCGGAATAAATTGTACCACAAACACCAAT
AATATCTATCCTGCCTCATCATATATACATATGTATATATAGTTATTTAGTTGAACACAC
GAAATGATCGAACATGTTGATTGTAGCATGTACACAACAAACCGATTGATTGAAGGACAG
CCACACACGAGTGGGTAAAGCCGCCAAACCGTGACTTTGATCAGTATACCGGGAATTTGA
CTGCCGGTCATTTTAATTAATTTCTGCTAAGTACATATTATCAGACTTAGCACTAGTAGA
AAATGATTACATATAGCAGTTATTGTTTTGTAATTTTACTATAAACTGAAAACACCAAAG
ATAAGAACATTTGAATCGAAACAAATGTATATACATGTGCAAATAAATGATCATTTTGAT
AAATTTAGTTTTAATAAGACATCAAAAGCAAGCATATTCATCATAAAATATGTAACGAGA
TCGAAGATTCAACATATACAAGGACTAACCATTTTAATATATTTTCAGGAAGTGGTTAAC
AGCAGTGTTTGGTCAGATATGCCTTCAAATGCTAAAGAAGTAAGCAAATAGATTCCTCTC
ATTTCCATAAAAAGGAACACAACCTTGGGTTGATCGAGCGAAAATATTAGATTAAAGGCC
AACATGGCCTTAAATAGAAA
Pro Sequence
MAVKRSSKVTQTAMLKQILKRCSSLGKKQCYDEEGLPLDVPKGHFPVYVG
EKRTRYIVPITFLSHPEFLILLQQAEEEFGFHHDMGGLTIPCEEVVFLSL
TSMIR
mRNA Sequence
AAATAATAGTAATATTGCTTTAGCATTCCATCCTCATCCTCCTCCATAAATAACCCCTTTTCGCAACCTA
TCTCTCATCAAACACTTCTCTTTTCTCCTCCAAATTGTCTCCTCGCTCCCTCATCTCATCAAGAAGTCAA
ACACTAGCTAAAACTAAAACAATGGCGGTAAAGAGATCTTCTAAGGTAACACAAACAGCAATGTTAAAGC
AAATCCTCAAGAGGTGCTCGAGCTTAGGTAAGAAACAATGCTACGACGAGGAAGGCCTCCCTCTTGACGT
ACCAAAGGGACATTTTCCTGTTTACGTAGGCGAAAAGCGTACGAGGTACATCGTACCAATCACCTTCTTG
TCTCATCCCGAATTTCTGATCCTTCTTCAACAAGCAGAGGAAGAGTTCGGTTTCCACCACGACATGGGTG
GACTCACCATCCCTTGTGAAGAAGTCGTTTTTCTCTCTCTAACATCCATGATCCGATAAGACGCAGAGAG
AGTTTTACATTATGATCAAGACTAAGATTCTTTTCTTTTTGCCTTTGGATAATAATTTGTTATCCAAATG
GTTCTTTTTTCCTGGACTAATTCTAAACCTGTAAGATCCACCTAAAAGATCATTCTCTACACGGATCATG
TAAATCtccatcgggttttaattagttcattagttccccctaatggggTTAGTATTCGATGGAACATGTA
TGTTTTTTTTTCCATTGAGCTGATAAGTGGTGGTTTGCGCTAATAGATGATTAATACCGCAAGTTGTATT
GGCCATTTTTTTTTAAGGTTTGAATATTGTGATCGTTCGAGTTCCTTGAAACGAAGAAATGTTCAATCTT
TGTATGAGTCTTTTCAATGTTTTTTTTCTCGGATGTAAGTATTTTTTTTTGAGATTTGTGCGAGTGATGT
AGTATAAATTAAAGCTTCCATTCTGTGTTTTATTAAATTAATAATTACGTTTATTATATGTGGC