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Detail for ZS11_A08G16840.t1

Genome:
ZS11: ZS11_A08G16840.t1
ZS11_v0: BnaA08T0133700ZS
WE: WE_A08G17440.t1
WE_v0: BnaA08T0116400WE
Darmor: A08p16660.1_BnaDAR
BH: BnaA08T165700BH
Quinta: BnaA08T0129500QU
ZS2: BnaA08T134300ZS2
SW: BnaA08T155200SW
Express61: A03p053750.1_BnaEXP
Xiaoyun: BnaA08G0135100XY
P202: BnaA08G011230P202.1
BL: BnaA08T165700BH
TA: BnaA08T135200TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g03430D
RB: BnaA03T605000RB
No2127: BnaA08T0104400NO
P130: BnaA08G014970P130.2
Length: 117
KOG ID: KOG3466
KOG E-value: 5.610000e-69
KOG Score: 203.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006120(mitochondrial electron transport, NADH to ubiquinone)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03965 NDUFB9; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
NR Protein: XP_006412196.1
NR E-value: 4.400000e-64
NR Score: 248.8
NR Annotation: XP_006412196.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Eutrema salsugineum]
SwissProt Protein: Q945M1|NDUB9_ARATH
SwissProt E-value: 2.450000e-82
SwissProt Score: 239.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 OS=Arabidopsis thaliana OX=3702 GN=CIB22 PE=1 SV=1
CDS Sequence (359 bp)
ATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGAGAGCGGCGCAAAAGGAGAGGGTTCGAATCCTCT
ATCGCCGTGCCCTTAAGGATACTCTGAACTGGGCTGTTCATCGCCACATTTTCTACCGAGACGCTTCTGA
TCTGCGCGAGAAGTTCAATGCCAACCAAGACGTGGAGGATGTTGACAGAATCGACAAACTGATTGCTCAT
GGTGAAGCCGAATACGACAAATGGCGACACCCTGATCCTTATATCGTTCCATGGGCTCCTGGTGGCTCAA
AGTTCTGTAGAAACCCTACTCCGCCTGCTGGGATTGAGATTGTGTACAACTATGGTCAAGAAGACAACCC
ATAA
Upstream Sequence
ACTAGTTGAAAATCAGAAATTAGAAGAAGAAAAACAGAGTGAGGAGGAGAGTCGAAAGGAAAGCAATCGG
AAGCAGAAAGATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGAGAGCGGCGCAAAAGGAGAGGGTT
CGAATCCTCTATCGCCGTGCCCTTAAGGATACTCTGAACTGGGCTGTTCATCGCCACATTTTCTACCGAG
ACGCTTCTGATCTGCGCGAGAAGTTCAATGCCAACCAAGACGTGGAGGATGTTGACAGAATCGACAAACT
GATTGCTCATGGTGAAGCCGAATACGACAAATGGCGACACCCTGATCCTTATATCGTTCCATGGGCTCCT
GGTGGCTCAAAGTTCTGTAGAAACCCTACTCCGCCTGCTGGGATTGAGATTGTGTACAACTATGGTCAAG
AAGACAACCCATAAATCTACTTTTCATACCCCCATCAATAAAAATTGAAGCATCTTGTGGCTATGGTTCA
GAATATAAACTCAAGGCTTTCAAGGTTGAAACTTTGAGGGACCATTTCTATTTTTTCGTTCACTATTGTT
TCAACTTGTTAGTCAATGGATGTTCTGGCTTTCAAACCCTATGAGGAAAACAGGAAATTGTCTGTGTTTT
TTGCTGTCTACTTTGAccacataagcgttttataaatgtgtccgTTTGCTAACAAAAACGCGATTCCTAA
CCCAAAAGAGTAA
Downstream Sequence
CGTATGTTTCTTCTCCTCAGATCTCCGAATCGGATTTGGATTTGGTTTTCTCTCTGTTTT
TTTTTTAGCCGATCTCGCGTATTGGGTTGTTGAATTCATTGATGTTCGTTCATTTTCAGG
CTTCTGATCTGCGCGAGAAGTTCAATGCCAACCAAGACGTGGTATTGTTTCTCTTGCCGT
TTCGTTGTTCGTTTTGTTAATTGAATTGTTCAGTCATCCCCGGGAATGTAAGTTTATTGT
ATGTTGTTTGATCTAATTTGGTAAAGAGAGAGACTTTAGAGTTTAGAGAAATGATTAACA
GCTTATGTAAAGTGGGTTTGGACGTTAAACATGATAAAGCTTGCTTTTTTCTTTTTTCTT
TGTTATTGTGTTGAGTTGGTATCTCCAGTTCATTACTACGTAGAATAAACTCTGGTTTTG
CAATCCATTTGCTTATATGATTAAATGTTTCTGTGTCATCCACTTTAATAAAGTGACTTT
ATAGTTAAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAACTCCTGACTAGATGA
CACGTTGGTGATTGCGAATTTACCTTCTGATTCTCACTGCCTTTGTTTCTCATTGTGTCT
CCCTTGATTGTGGGTGTATGTTGTAGGAGGATGTTGACAGAATCGACAAACTGATTGCTC
ATGGTGAAGCCGAATACGACAAATGGCGACACCCTGATCCTTATATCGGTAAGCATCTCA
AACCATGATGGTACATTTGATAGAGAATTGGATTTCTAAATGACCCACTTACTTTTTATT
TAATTTTATTTTGTAGTTCCATGGGCTCCTGGTGGCTCAAAGTTCTGTAGAAACCCTACT
CCGCCTGCTGGGGTAATCTTTCTTCTCAACACTTATTGCTTCCATGGTCTCACTTTCCTA
TTCTCAAAGTACTCATCTTCTTTTGTCACTGGTGCAGATTGAGATTGTGTACAACTATGG
TCAAGAAGACAACCCATAAATCTACTTTTCATACCCCCATCAATAAAGTAAGTTGGATGG
TTATCAGATGCTCTCATTCTTTTCGTTTCAGTCTCATAAATGTCCTTTCAATGGAACCAC
TACGCATGTTAAGTTTCAATGGTGTTTGTTATCTACTGCAGAATTGAAGCATCTTGTGGC
TATGGTTCAGAATATAAACTCAAGGCTTTCAAGGTTGAAACTTTGAGGGACCATTTCTAT
TTTTTCGTTCACTATTGTTTCAACTTGTTAGTCAATGGATGTTCTGGCTTTCAAACCCTA
TGAGGAAAACAGGAAATTGTCTGTGTTTTTTGCTGTCTACTTTGAccacataagcgtttt
ataaatgtgtccgTTTGCTAACAAAAACGCGATTCCTAACCCAAAAGAGTAAGTGAATTC
GATGTGTTTTATTCATATCCTAAAAAAGAATAAGGTGATGATTGTTTCACTAGTTTTTGG
TTTTAGTTTCTGGCTTTTAGATTTTAGTTTTTGATTTTAGTTTTTAGTTTTAGTTTTTAG
ATTTTGATTTTGATTTTCGTTTTTAGTTTTTGGTTTTTAGTTTTAGTTTTTGGTTTTTGA
TTTGTGTAttttaggttaaaatttatttttgaaattactgttttgtttttataaaatgag
atgatttattttaagacaatacaaaaaaatactaataaaattattgaaatttatattaaa
atgtagaaaatatcaataaaattttaaaattatcattaaaatatatcaaaataCTATGAC
TGAGAAAATCTAAAAAGAATCAACACAAAATGGTTTTCAGAGTTTTTATTTTTAGTTATT
AGTTTTTAGATTTTTATTTTTATATTTAtgtttaatttgattttgattttttttttgaat
tatttttcagttttatgaattttatagcaataaaataaatcataaataaactatgtaaaa
gtttatattttattattaaaatgtattaaaatattatgtctgttatttgaaaaatatatt
aaatttttttttaattattg
Pro Sequence
MSGVSTAAYFARRAAQKERVRILYRRALKDTLNWAVHRHIFYRDASDLRE
KFNANQDVEDVDRIDKLIAHGEAEYDKWRHPDPYIVPWAPGGSKFCRNPT
PPAGIEIVYNYGQEDNP
mRNA Sequence
ACTAGTTGAAAATCAGAAATTAGAAGAAGAAAAACAGAGTGAGGAGGAGAGTCGAAAGGAAAGCAATCGG
AAGCAGAAAGATGAGCGGAGTTTCAACGGCGGCGTATTTCGCGCGGAGAGCGGCGCAAAAGGAGAGGGTT
CGAATCCTCTATCGCCGTGCCCTTAAGGATACTCTGAACTGGGCTGTTCATCGCCACATTTTCTACCGAG
ACGCTTCTGATCTGCGCGAGAAGTTCAATGCCAACCAAGACGTGGAGGATGTTGACAGAATCGACAAACT
GATTGCTCATGGTGAAGCCGAATACGACAAATGGCGACACCCTGATCCTTATATCGTTCCATGGGCTCCT
GGTGGCTCAAAGTTCTGTAGAAACCCTACTCCGCCTGCTGGGATTGAGATTGTGTACAACTATGGTCAAG
AAGACAACCCATAAATCTACTTTTCATACCCCCATCAATAAAAATTGAAGCATCTTGTGGCTATGGTTCA
GAATATAAACTCAAGGCTTTCAAGGTTGAAACTTTGAGGGACCATTTCTATTTTTTCGTTCACTATTGTT
TCAACTTGTTAGTCAATGGATGTTCTGGCTTTCAAACCCTATGAGGAAAACAGGAAATTGTCTGTGTTTT
TTGCTGTCTACTTTGAccacataagcgttttataaatgtgtccgTTTGCTAACAAAAACGCGATTCCTAA
CCCAAAAGAGTAA