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Detail for ZS11_A08G23320.t1

Genome:
ZS11: ZS11_A08G23320.t1
ZS11_v0: BnaA08T0189600ZS
WE: WE_A08G24030.t1
WE_v0: BnaA08T0170900WE
Darmor: A08p22940.1_BnaDAR
BH: BnaA08T225100BH
Quinta: BnaA08T0183500QU
ZS2: BnaA08T190400ZS2
SW: BnaA08T221200SW
Express61: A08p017120.2_BnaEXP
Xiaoyun: BnaA08G0193100XY
P202: BnaA08G015220P202.1
BL: BnaA08T225100BH
TA: BnaA08T191700TA
Da-Ae: Not available
RB: BnaA08T217600RB
No2127: BnaA08T0159100NO
P130: BnaC03G075110P130.4
Length: 183
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016655(oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor)
KEGG Ortholog: -
NR Protein: XP_009109404.1
NR E-value: 9.300000e-93
NR Score: 344.7
NR Annotation: XP_009109404.1 PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Brassica rapa]
SwissProt Protein: Q2V2S7|NDHM_ARATH
SwissProt E-value: 1.110000e-101
SwissProt Score: 294.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1
CDS Sequence (559 bp)
ATGGCTGCAGCATTCTCTTACACTGCATGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGCTCAAA
TCCGACCAATTAGAACATCACAAAAGGCTTTCGTGGTGACAAACCCTGAGCAAGACAACACACTCCAGGA
ACAAGGAATAGATACAATCAAAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTG
AGACCAGTGGAGAAACAGACTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGATCCAACTGAAG
AGTTTGTGTGGGAAGATGAAAGCTGTAACAAGGTTTACTCTTATTTTCAAGAACTAGTCGATCACTATGA
GGGAGCACCATTGACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGAGCATTACATAAGGAAGATG
TTGTTTGATGGCGAGAtacaatacaacatggatgcaagagTTCTTAATTTCAGTATGGGCAAGCCTCGTG
TTCCATTCAACACCAGCAACCTTGACGGTGGTGGAGACGACCAGCCTCAAGAAGATGCATAG
Upstream Sequence
ATGGCTGCAGCATTCTCTTACACTGCATGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGCTCAAA
TCCGACCAATTAGAACATCACAAAAGGCTTTCGTGGTGACAAACCCTGAGCAAGACAACACACTCCAGGA
ACAAGGAATAGATACAATCAAAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTG
AGACCAGTGGAGAAACAGACTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGATCCAACTGAAG
AGTTTGTGTGGGAAGATGAAAGCTGTAACAAGGTTTACTCTTATTTTCAAGAACTAGTCGATCACTATGA
GGGAGCACCATTGACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGAGCATTACATAAGGAAGATG
TTGTTTGATGGCGAGAtacaatacaacatggatgcaagagTTCTTAATTTCAGTATGGGCAAGCCTCGTG
TTCCATTCAACACCAGCAACCTTGACGGTGGTGGAGACGACCAGCCTCAAGAAGATGCATAG
Downstream Sequence
GGTGAGTGGCTAAGCAGTGTGACACGCCACGTCAGAATATACGCTGCTTATATCGATCCA
GAGACTTGTGAGTTTGACCAGACGCAGATGGATAAACTCACTTTGATTCTAGATCCAACT
GAAGAGTTTGTGTGGGAAGATGAAAGCTGTAACAAGGTTTACTCTTATTTTCAAGAACTA
GTCGATCACTATGAGGTAACAATATTAAAACTATATCATTTTACTTGATATTATTAAATT
TTGGAAGAGAGATTGATATTGAATATGGTTTTTGATTTTATAAAGAGAGAGTTAGAAGAG
CTAGACtttttctTATTTATTTTTATTTTTTTGGACAGGGAGCACCATTGACAGAGTATA
CACTAAGGTTGATAGGATCAGACGTAGAGCATTACATAAGGAAGATGTTGTTTGATGGCG
AGAtacaatacaacatggatgcaagagTTCTTAATTTCAGTATGGGCAAGCCTCGTGTTC
CATTCAACACCAGCAACCTTGACGGTGGTGGAGACGACCAGCCTCAAGAAGATGCATAGT
GAAAACAACTCTATACCAAAACTATGGAGAAAGAAGAGAGATATCAAAACAAGATGATCT
TTTGTATATGGGTTTATGAAATGCTTTTTCATTTTCTCATGCTACAAGTAACATATGTAT
ATACATATATGGTCATATGCTATGTTTGAAACTCTTAATTATCAATCCGCATAAGTCATA
ACTAAGGTAATTATTCTAGAATCGTAACAAATCATAATCACTAAATATGAGGTACGTATA
TTTAGAGTTGGGCTATGATGTCAAAAAGCCCATACAAGGCCCAGAAAATGACTTGTAGCC
CACGGGGCTTTTCCTATAAATGGTTAAACCCTACACGTTGTGCGTGTCCCATCTCCGAGC
TTAAACCCTTCTTTCTCCACCGACTCTCTCTCCAACCAAAAATGGCCTCCGTCGCGCTTC
TACGTGCTCTCCGCCGCCGCGAACTCCACACAGCTTCCGTCTCCGCGTTTAAATCCGTAT
GTACTTTCCCCTCGATCTTCATTTCTAGCTTGAGAAATCACGTTTTAGTTTTCCAGATCT
GTAAATCGGATTAGGGTTTAAAAATTATCGAATGGGTTGAATCGATTTCGTATAAAGTTT
CGTACTTTGTTGTTCCAGCTTCGATCTAATATTAGTTGAAAGCTTACACTTTTAGTATTG
AATCTGTAGGTTTCTACAAATGGAAAGACGTCTTTGGTAGGTCACTTCGCAAGGCCTTTC
TGGTATAACTTCAAGCTCTCTTGAAACATGACTCTCCTTTGTAATGTTTTGTTTTTTACT
TATTTGTTCTGTTGATCCAGCTCGAGGCCTGTGGGGAATGATGTTATCGGTATTGACTTG
GGTACCACCAACTCTTGTGTAGCTGTCATGGAAGGAAAGGTATTGACTTTGATCTTGATA
TGATTGTTTGAATAAAACTTTGATCTCTTTTTCTTTAACAGACTCCTAGAGTCATTGAGA
ACGCAGAAGGAACAAGAACCACACCATCAGTGGTTGCTATCAACCAGAAGGGCGAGCTTC
TCGTTGGAACACCAGCTAAACGTCAGGCTGTAACCAACCCAACCAACACCATCTTCGGGA
GCAAGCGTTTGATAGGGAGACGTTTTGAAGACTCCCAGACGCAGAAGGAGATGAAAATGG
TTCCTTACAAGATCGTCAAGGCGCCGAACGGTGACGCTTGGGTTGAAGCGAATGGTCAGA
AGTTTTCTCCAAGTCAGATTGGAGCTAATGTTTTGACCAAAATGAAGGAGACAGCTGAAG
CTTACCTCGGGAAGAGCATTACCAAAGCTGTTGTGACTGTTCCAGCTTACTTCAACGATG
CGCAGAGACAGGCTACGAAGGATGCTGGGAAGATCGCTGGTCTTGATGTCCAGAGAATCA
TCAACGAGCCGACAGCTGCTGCGTTGTCATATGGGATGAACAACAAGGAGGGTGTTATAG
CTGTGTTTGATCTTGGAGGT
Pro Sequence
MAAAFSYTACPKFSLLQPPMAAQIRPIRTSQKAFVVTNPEQDNTLQEQGI
DTIKEEQPAEQQMKKQPTPLRPVEKQTNVKSTGLPREFGDPTEEFVWEDE
SCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNM
DARVLNFSMGKPRVPFNTSNLDGGGDDQPQEDA
mRNA Sequence
ATGGCTGCAGCATTCTCTTACACTGCATGTCCTAAGTTTTCTCTATTACAACCTCCCATGGCTGCTCAAA
TCCGACCAATTAGAACATCACAAAAGGCTTTCGTGGTGACAAACCCTGAGCAAGACAACACACTCCAGGA
ACAAGGAATAGATACAATCAAAGAAGAGCAACCAGCAGAGCAGCAGATGAAGAAGCAGCCAACGCCATTG
AGACCAGTGGAGAAACAGACTAATGTGAAGAGCACAGGCTTGCCAAGAGAGTTCGGTGATCCAACTGAAG
AGTTTGTGTGGGAAGATGAAAGCTGTAACAAGGTTTACTCTTATTTTCAAGAACTAGTCGATCACTATGA
GGGAGCACCATTGACAGAGTATACACTAAGGTTGATAGGATCAGACGTAGAGCATTACATAAGGAAGATG
TTGTTTGATGGCGAGAtacaatacaacatggatgcaagagTTCTTAATTTCAGTATGGGCAAGCCTCGTG
TTCCATTCAACACCAGCAACCTTGACGGTGGTGGAGACGACCAGCCTCAAGAAGATGCATAG