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Detail for ZS11_A08G30080.t1

Genome:
ZS11: ZS11_A08G30080.t1
ZS11_v0: BnaA08T0253200ZS
WE: WE_A08G31070.t1
WE_v0: BnaA08T0231000WE
Darmor: A08p29990.1_BnaDAR
BH: BnaC08T254100BH
Quinta: BnaA08T0245200QU
ZS2: BnaA08T252600ZS2
SW: BnaC08T250600SW
Express61: A08p023540.1_BnaEXP
Xiaoyun: BnaA08G0257100XY
P202: BnaC08G051150P202.1
BL: BnaC08T254100BH
TA: BnaA08T255000TA
Da-Ae: Not available
RB: BnaA08T285600RB
No2127: BnaA08T0221200NO
P130: BnaA08G026310P130.1
Length: 297
KOG ID: KOG2969
KOG E-value: 2.610000e-142
KOG Score: 404.0
KOG Annotation: Function unknown
Biological Process: GO:0006744(ubiquinone biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008289(lipid binding)
KEGG Ortholog: K18587 COQ9; ubiquinone biosynthesis protein COQ9
NR Protein: XP_013657232.1
NR E-value: 1.400000e-162
NR Score: 577.4
NR Annotation: XP_013657232.1 ubiquinone biosynthesis protein COQ9-B, mitochondrial-like [Brassica napus]
SwissProt Protein: Q8K1Z0|COQ9_MOUSE
SwissProt E-value: 6.090000e-44
SwissProt Score: 155.0
SwissProt Annotation: Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Mus musculus OX=10090 GN=Coq9 PE=1 SV=1
CDS Sequence (906 bp)
ATGTACCGAACGGCGGCGAAGCGTCTTCTCGGCGCTGGTTTAACAACCAGCCGCCTCCTCCGATCTCCCA
AGCTCACGTCCTCCACCATCATCCCTTCCTCTCACACTTCCAATCTCTGCACTTCATCGATGGGTCACAC
CGAATCACCGATTAGTAACCAATCGGGTCCCACGTCGGCAGGGGAAGGACCTCGTAGGAAACCGAGACCC
GAGTTTCAGGAAGAGCAAGCTCGTGTTCTCTCAGCGTCTCTCCGTCACGTGGCGAGGTTAGGTTGGACGG
AGGAAGCGATGATGGCTGGTTCGAGAGACGTTGGTGTGTCTCCTTCCATCGTTGGGTCTTTCTCTAGTAA
AGAAGCTGCACTTGTCGAGTACTTCATGGATGAATGCCTACAACTGCTTGTTGATAGAGTAGACTCTGGA
TTGGATTTGCAAAACCTCATTCCGAGTGAACGTATCTCCAAGCTCGTCAGAGTTCGGTTAGAGATGCAGG
TTCCTTACATGTCAAAGTGGCCTCAAGCTCTTAGCATTCAAGCGCATCCGGTGAACGTGCCAACGAGTTT
TAAGCAACGGGCAATGTTGGTTGATGAGATGTGGCACGCTGTTGGAGATGGAGCCTCTGATTTGGATTGG
TATGTGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACTGAGATTTACATGCTTACCGATGACTCCC
CAGAGTATCGCGAAACATGGGAGTTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAAAGCAT
ACAAGAGGCCAAGTATTTTGCACAAGACATAGGAGCTGGAGTTGGAAAATTGTTTCAAGGACTGATGAAT
GGAGTTATGCAGAGCATGTCCACAAGGGGTGGTCGTAGTAGCTCTGCGTTTTGA
Upstream Sequence
ATCATACTTCACCACCATAGTAGAATCAAAGGAAGCTCTCCTTTAACTTCTCTTGGCAACGAACTCATCC
ACGTGTCAAAAAACTGATACCCTTAACCCACGGCGACGATGTACCGAACGGCGGCGAAGCGTCTTCTCGG
CGCTGGTTTAACAACCAGCCGCCTCCTCCGATCTCCCAAGCTCACGTCCTCCACCATCATCCCTTCCTCT
CACACTTCCAATCTCTGCACTTCATCGATGGGTCACACCGAATCACCGATTAGTAACCAATCGGGTCCCA
CGTCGGCAGGGGAAGGACCTCGTAGGAAACCGAGACCCGAGTTTCAGGAAGAGCAAGCTCGTGTTCTCTC
AGCGTCTCTCCGTCACGTGGCGAGGTTAGGTTGGACGGAGGAAGCGATGATGGCTGGTTCGAGAGACGTT
GGTGTGTCTCCTTCCATCGTTGGGTCTTTCTCTAGTAAAGAAGCTGCACTTGTCGAGTACTTCATGGATG
AATGCCTACAACTGCTTGTTGATAGAGTAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACG
TATCTCCAAGCTCGTCAGAGTTCGGTTAGAGATGCAGGTTCCTTACATGTCAAAGTGGCCTCAAGCTCTT
AGCATTCAAGCGCATCCGGTGAACGTGCCAACGAGTTTTAAGCAACGGGCAATGTTGGTTGATGAGATGT
GGCACGCTGTTGGAGATGGAGCCTCTGATTTGGATTGGTATGTGAAGCGCACTGTTCTTGGAGGAGTTTA
CTCAACCACTGAGATTTACATGCTTACCGATGACTCCCCAGAGTATCGCGAAACATGGGAGTTCTTGGAT
GACAGAGTCAAAGATGCTTTTGATCTGAAGAAAAGCATACAAGAGGCCAAGTATTTTGCACAAGACATAG
GAGCTGGAGTTGGAAAATTGTTTCAAGGACTGATGAATGGAGTTATGCAGAGCATGTCCACAAGGGGTGG
TCGTAGTAGCTCTGCGTTTTGAGAAAGTCACACACACCTTTTGACAAATGAATTTG
Downstream Sequence
GTGAGTCTCTTTTACGCCGTAAAGTTTCCGTTTTTAATTTATCTAATTTAAGAGTTTTCT
GCAGGCGAGGTTAGGTTGGACGGAGGAAGCGATGATGGCTGGTTCGAGAGACGTTGGTGT
GTCTCCTTCCATCGTTGGGTCTTTCTCTAGTAAAGAAGCTGCACTTGTCGAGGTATATAT
GTCTGTCTTCAATGTCTTCAACAACACTCTTTGAAAGCTATAAACTTCATGAAAGCTTGA
AACTTTGTACTCTTGTTCAGTACTTCATGGATGAATGCCTACAACTGCTTGTTGATAGAG
TAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACGTATCTCCAAGCTCGTCA
GAGTTCGGTTAGAGATGCAGGTTCCTTACATGTCAAAGTGGCCTCAAGCTCTTAGCATTC
AAGTAAGTTTTGGGGATGGTTTTCTCTGTTTTGTGATAAGCTTATGCATATATTCTGATG
TTTTGGATGCATCTCCAGGCGCATCCGGTGAACGTGCCAACGAGTTTTAAGCAACGGGCA
ATGTTGGTTGATGAGATGTGGCACGCTGTTGGAGATGGAGCCTCTGATTTGGATTGGTAT
GTGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACTGAGATTTACATGCTTACCGAT
GACTCCCCAGGTTCTTAAACTTCTCTCTCTCAAATGCATTGTCCTATGCGGTTGATGAAA
AATAACACAAGTTTTGAAGTTTTGTTATCATCATTATTTCATGCTGAGCAGAGTATCGCG
AAACATGGGAGTTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAAAGCATAC
AAGAGGTATAAGAATAAAACCTTTTCTCCACATGCTTATTCTTGTTACTATTGGAATGTG
AGTTCTCATGGGGATAAATTCACATATTGTGTGTCAGGCCAAGTATTTTGCACAAGACAT
AGGAGCTGGAGTTGGAAAATTGTTTCAAGGACTGATGAATGGAGTTATGCAGAGCATGTC
CACAAGGGGTGGTCGTAGTAGCTCTGCGTTTTGAGAAAGTCACACACACCTTTTGACAAA
TGAATTTGCTTCATATACTTTGAGATATGCTATAATAAATTATATCACTATGTATGACTT
GAAGTGTATAAAACTTTTTTTGTTGAATAAAACCATTGAGAACATTGATTTTCTGAGTGC
ATGATGTTGTGATATGTGAGTGAACAAGAAAGAAAGTTGTGTAATCTTGGGTTCAACTTA
TTTAGGAAGGTTGTTTAGCGTTCGAATACAAACTATAGGGGCTTCGATGTAATTAATCAA
AATTGAGGATAGTTGTAGAGAAAGCTTTTAAATATTCTACTTTGACCCCGGAAAGTTTTA
GAAAAGTCAATTTTGGGTGGTAGCTATTTAGCTGAACTCGAGCCAAGCTACAAACTGATT
TGGTTTTGGAGTTTAGACAAAAGCCTGAGAGATAGAGAGTTTCTGTCGGTGAATATCGGG
GAAGATGGTGAAGTCTTCAGAAATCGTGGCGAAGCTCAATCTCAGGTCACACCAAGAAGG
TGGTTTCTTCTATGAAACGTTCAGAGACTCTTCTGTTATCCTCTCCACCTCTCATCTCCC
TCCCACCTGTAACTCTCTCTCACTCTTGTTCCATTATGATTTGTAATCTTACTTGTGTAA
TGCAGTCATTTAGATCCGAGTTTGGTTGAATTAAAATCGCTGATATTAGAAAATAGTATT
GCTTGATTTGTTTTTGGAATTTACTATTTCAACAACCCACAAAATGTTTATTACAGATCA
TCTAGAAAGTCTGATCCTTTTTGTTTTGTGTCTGAATCTGTGCACAGTCAAGGTGGAGAG
AGCTGTGAGCACAAGTATCTACTTTTTGCTTCCATCTGGTAACGTTTCACGTCTTCATCG
CATACCCATGGCTGAAACCTGGCACTTCTATTTGGGTGAACCCCTCACTGTAAGTGTGTG
AAGAAAAAAAGGAACGATTT
Pro Sequence
MYRTAAKRLLGAGLTTSRLLRSPKLTSSTIIPSSHTSNLCTSSMGHTESP
ISNQSGPTSAGEGPRRKPRPEFQEEQARVLSASLRHVARLGWTEEAMMAG
SRDVGVSPSIVGSFSSKEAALVEYFMDECLQLLVDRVDSGLDLQNLIPSE
RISKLVRVRLEMQVPYMSKWPQALSIQAHPVNVPTSFKQRAMLVDEMWHA
VGDGASDLDWYVKRTVLGGVYSTTEIYMLTDDSPEYRETWEFLDDRVKDA
FDLKKSIQEAKYFAQDIGAGVGKLFQGLMNGVMQSMSTRGGRSSSAF
mRNA Sequence
ATCATACTTCACCACCATAGTAGAATCAAAGGAAGCTCTCCTTTAACTTCTCTTGGCAACGAACTCATCC
ACGTGTCAAAAAACTGATACCCTTAACCCACGGCGACGATGTACCGAACGGCGGCGAAGCGTCTTCTCGG
CGCTGGTTTAACAACCAGCCGCCTCCTCCGATCTCCCAAGCTCACGTCCTCCACCATCATCCCTTCCTCT
CACACTTCCAATCTCTGCACTTCATCGATGGGTCACACCGAATCACCGATTAGTAACCAATCGGGTCCCA
CGTCGGCAGGGGAAGGACCTCGTAGGAAACCGAGACCCGAGTTTCAGGAAGAGCAAGCTCGTGTTCTCTC
AGCGTCTCTCCGTCACGTGGCGAGGTTAGGTTGGACGGAGGAAGCGATGATGGCTGGTTCGAGAGACGTT
GGTGTGTCTCCTTCCATCGTTGGGTCTTTCTCTAGTAAAGAAGCTGCACTTGTCGAGTACTTCATGGATG
AATGCCTACAACTGCTTGTTGATAGAGTAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACG
TATCTCCAAGCTCGTCAGAGTTCGGTTAGAGATGCAGGTTCCTTACATGTCAAAGTGGCCTCAAGCTCTT
AGCATTCAAGCGCATCCGGTGAACGTGCCAACGAGTTTTAAGCAACGGGCAATGTTGGTTGATGAGATGT
GGCACGCTGTTGGAGATGGAGCCTCTGATTTGGATTGGTATGTGAAGCGCACTGTTCTTGGAGGAGTTTA
CTCAACCACTGAGATTTACATGCTTACCGATGACTCCCCAGAGTATCGCGAAACATGGGAGTTCTTGGAT
GACAGAGTCAAAGATGCTTTTGATCTGAAGAAAAGCATACAAGAGGCCAAGTATTTTGCACAAGACATAG
GAGCTGGAGTTGGAAAATTGTTTCAAGGACTGATGAATGGAGTTATGCAGAGCATGTCCACAAGGGGTGG
TCGTAGTAGCTCTGCGTTTTGAGAAAGTCACACACACCTTTTGACAAATGAATTTG