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Detail for ZS11_A08G30540.t1

Genome:
ZS11: ZS11_A08G30540.t1
ZS11_v0: BnaA08T0258300ZS
WE: WE_A08G31600.t1
WE_v0: BnaA08T0235500WE
Darmor: A08p30540.1_BnaDAR
BH: BnaC08T246300BH
Quinta: BnaC08T0199600QU
ZS2: BnaC08T220600ZS2
SW: BnaC08T243700SW
Express61: A08p024070.1_BnaEXP
Xiaoyun: BnaA08G0262100XY
P202: BnaA08G019180P202.1
BL: BnaC08T246300BH
TA: BnaA08T259800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaC08T246300RB
No2127: BnaA08T0226200NO
P130: BnaA08G026760P130.1
Length: 572
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 941.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0052716(hydroquinone:oxygen oxidoreductase activity),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_009110363.1
NR E-value: Not available
NR Score: 1192.2
NR Annotation: XP_009110363.1 PREDICTED: laccase-1 [Brassica rapa]
SwissProt Protein: Q9LMS3|LAC1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1068.0
SwissProt Annotation: Laccase-1 OS=Arabidopsis thaliana OX=3702 GN=LAC1 PE=2 SV=1
CDS Sequence (1743 bp)
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCAAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
AACACTCCTTTGGCATGCTCATCACTCATGGCAACGGGCCTCTGTCTACGGTGCCTTCATCATCTATCCA
AGGCAGCCTTATCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCTAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGCCCACTCTACCCATGCTCTACCAAAGATACTTTCACGGCGAACGTGGAG
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAGCTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTCCACACAAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACACTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAGTTTCTCATCGCC
GCAACTCCTTACGTCACCTCCGTCTTCCCCTTCAACAACTCCACCGCCGTTGGCTTCCTCCGTTACAACA
ACAAAAGCAAACCGGTAAACCACCCAAACCGACGTCGGTTAATAACGTCCCTCTCCACACGCGCGGTTCT
CCCGGACATGCTTGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAG
TATCCTTGCAAAGTCCCGACGACGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACT
GCCCGGAGAATCAAACTTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTT
CATCAGACCTCCTATCTCAATCCTCGAGAGCTACTACAAGAAACAGAGCAAAGGTGTGTTCACTCTCGAC
TTCCCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGATCCCGTGTCGGAGAACATGAACACCG
AGTTCGGAACCAAGCTCTTCGAAGTGGACTTCGGTGCGAGGTTAGAGATTGTGTTTCAAGGGACGAGTTT
TTTAAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGGAGAGGGTTCGGA
AACTTCGACGTGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACCATCGCGG
TGCCGACGGGAGGATGGGCGGCGATTAGGATAAACGCGGATAATCCTGGAGTTTGGTTTATTCACTGTCA
TCTCGAGCAGCATACCTCGTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAG
ACTCTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA
Upstream Sequence
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCAAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
AACACTCCTTTGGCATGCTCATCACTCATGGCAACGGGCCTCTGTCTACGGTGCCTTCATCATCTATCCA
AGGCAGCCTTATCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCTAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGCCCACTCTACCCATGCTCTACCAAAGATACTTTCACGGCGAACGTGGAG
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAGCTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTCCACACAAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACACTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAGTTTCTCATCGCC
GCAACTCCTTACGTCACCTCCGTCTTCCCCTTCAACAACTCCACCGCCGTTGGCTTCCTCCGTTACAACA
ACAAAAGCAAACCGGTAAACCACCCAAACCGACGTCGGTTAATAACGTCCCTCTCCACACGCGCGGTTCT
CCCGGACATGCTTGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAG
TATCCTTGCAAAGTCCCGACGACGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACT
GCCCGGAGAATCAAACTTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTT
CATCAGACCTCCTATCTCAATCCTCGAGAGCTACTACAAGAAACAGAGCAAAGGTGTGTTCACTCTCGAC
TTCCCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGATCCCGTGTCGGAGAACATGAACACCG
AGTTCGGAACCAAGCTCTTCGAAGTGGACTTCGGTGCGAGGTTAGAGATTGTGTTTCAAGGGACGAGTTT
TTTAAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGGAGAGGGTTCGGA
AACTTCGACGTGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACCATCGCGG
TGCCGACGGGAGGATGGGCGGCGATTAGGATAAACGCGGATAATCCTGGAGTTTGGTTTATTCACTGTCA
TCTCGAGCAGCATACCTCGTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAG
ACTCTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA
Downstream Sequence
GTAAGCAAATTTTACGAAGACTACATCTCATCTTATCTACTCTTAGACTCTATTTTTATT
ACGTGGTCATAAAATGAAATTTCGAAAAAGTCATAAAGTAGTATGCACAAGGTTTATTCA
TTATACACATCTTCATCAGTCGTATGATACTATGATGTAATATCAGTGCCGGTCTTGACA
CTTTAATTTTTTGACAATGCTCTACGTTTGAATAAAAAATTGTGCTTTAACTATTCTTAT
AAAAAATTTATAATGTCTTACATAAAACTACAATTATCGCATAAAATTTCTCTATGTTCT
CTACATGGGACTTTACAGGATAGTTTCCGGTAACGTATTACACAAATGTAATAGTAACAT
TTTTCAATATTGATATAATTTTGGGGGGGTTTTAGGTCGAGTGGAAGAAGGTAACTAGGC
TGTGCCACACGAAGCAACTTTTAACGGTGAACGGACAATACCCTGGGCCGGCGGTGGTGG
TTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATTGCTCACAATACAACTA
TTCATTGGTAAATAATAATTAAATCTCATGCATGCATAATTTAACGACAGTTAAACATTT
TGTTAACTTACTTTATGTGAGTAGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGA
TGGACCGGCTTACATTACGCAGTGTCCTATACGATCAAAACAATCATATACATATAGGTT
CAAAGTGGAAGACCAAAGAGGAACACTCCTTTGGCATGCTCATCACTCATGGCAACGGGC
CTCTGTCTACGGTGCCTTCATCATCTATCCAAGGCAGCCTTATCCATTCTCCGGCAGCCA
CATCCAGTCCGAAATTCCCATTATACTCGGTACAAAATATAACTATAGCTTTTATGTTTT
GTTTCTTATCACTCAACTTTATAATTTTGCCAAAATTTTAAACCAAAATTATATATCAAA
CAGCGTATACAAACAGAAAAAGGGTAAATGGTAAAGCTTATCACTTTTAACTTTAGTTTC
TGCGAGTACACAGTCAGGAAAGGGATCATGCATATATATATAACACACGTAATATTTAAA
TATTATGAATAAGTAGATGATAATCAATATGTATATATTAGTGCTCATATCATGGATAAT
TATGAATTGAGCTGTGAAACTCTAACTAATTATGAATTGAATTTTATCCAATTCCTTTTG
ATAAAACTAACTGATTTCATATGGAGTTAGTGCGTGTTCCGTTCAGTTTATGTTGAATTT
GGTCTAATTCAGGTTAGTTTTATCTTGGTTCAAGACTTCAAGTTTACTTCCATTAAAAAC
CAATTTACAGAACATAAAACAAAGCCAGTATAACTTTTGATCATTAATATTAGAAAGATA
AAAGAAAAATTATGGAACCTTTTACTAAATAAAATAAAATCATGTTAAAGAACACCAACT
TAATGGTTTGGATTATATTTTGGTATGCTTTGGGTTGGTTTGAGTTTGGATGGTTTGACT
TTGGGTTGACTCAGTTTGATTTGGTTTTTGCCCACCAGGTGAATGGTGGAATGATGACGT
AGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCTAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGCCCACTCTACCCATGCTCTACCAAAGGTCGGACCAACCT
TTTCCCTTAACCGATGGTTTAGTTCCAAATCCAATTGAATCCGGTTTGTTTCTCACTATA
AATTTTAAAAACTCTGCAGATACTTTCACGGCGAACGTGGAGGCGGGAAAAACATACATC
CTCCGCATAATCAACGCTGCTCTAAACAACGAGCTCTTCTTCGCTATATCAAACCACACA
CTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTCCACACAAAAGCAATCATG
ATCGCTCCCGGTCAAACCACCACACTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAG
TTTCTCATCGCCGCAACTCC
Pro Sequence
MISTFLVLFATLLPYSSASTTRRFHFNVEWKKVTRLCHTKQLLTVNGQYP
GPAVVVNEGDTVEIKVTNRIAHNTTIHWHGLRQYRSGWADGPAYITQCPI
RSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIYPRQPYPFSGSH
IQSEIPIILGEWWNDDVDKVEKQMLKTGAGAKVSDAYTLNGLPGPLYPCS
TKDTFTANVEAGKTYILRIINAALNNELFFAISNHTLTVVEVDAVYTKPV
HTKAIMIAPGQTTTLLLRTNHLSDGEFLIAATPYVTSVFPFNNSTAVGFL
RYNNKSKPVNHPNRRRLITSLSTRAVLPDMLDTKFATRFSDSIKSLGSAE
YPCKVPTTIDKRVITTISLNLQNCPENQTCSGYDGKRFFASMNNVSFIRP
PISILESYYKKQSKGVFTLDFPEKPPSRFDFTGVDPVSENMNTEFGTKLF
EVDFGARLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDVEKDPEK
YNLVDPPERNTIAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGF
IVKDGPLPSQTLLRPPRDLPKC
mRNA Sequence
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCAAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
AACACTCCTTTGGCATGCTCATCACTCATGGCAACGGGCCTCTGTCTACGGTGCCTTCATCATCTATCCA
AGGCAGCCTTATCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCTAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGCCCACTCTACCCATGCTCTACCAAAGATACTTTCACGGCGAACGTGGAG
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAGCTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTCCACACAAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACACTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAGTTTCTCATCGCC
GCAACTCCTTACGTCACCTCCGTCTTCCCCTTCAACAACTCCACCGCCGTTGGCTTCCTCCGTTACAACA
ACAAAAGCAAACCGGTAAACCACCCAAACCGACGTCGGTTAATAACGTCCCTCTCCACACGCGCGGTTCT
CCCGGACATGCTTGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAG
TATCCTTGCAAAGTCCCGACGACGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACT
GCCCGGAGAATCAAACTTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTT
CATCAGACCTCCTATCTCAATCCTCGAGAGCTACTACAAGAAACAGAGCAAAGGTGTGTTCACTCTCGAC
TTCCCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGATCCCGTGTCGGAGAACATGAACACCG
AGTTCGGAACCAAGCTCTTCGAAGTGGACTTCGGTGCGAGGTTAGAGATTGTGTTTCAAGGGACGAGTTT
TTTAAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGGAGAGGGTTCGGA
AACTTCGACGTGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACCATCGCGG
TGCCGACGGGAGGATGGGCGGCGATTAGGATAAACGCGGATAATCCTGGAGTTTGGTTTATTCACTGTCA
TCTCGAGCAGCATACCTCGTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAG
ACTCTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA