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Detail for ZS11_A09G03310.t1

Genome:
ZS11: ZS11_A09G03310.t1
ZS11_v0: BnaA09T0039100ZS
WE: WE_A09G03420.t1
WE_v0: BnaA09T0031900WE
Darmor: A09p03380.1_BnaDAR
BH: BnaA09T029500BH
Quinta: BnaA09T0031100QU
ZS2: BnaA09T033400ZS2
SW: BnaA09T045800SW
Express61: A09p002500.1_BnaEXP
Xiaoyun: BnaA09G0032800XY
P202: BnaC07G074530P202.1
BL: BnaA09T029500BH
TA: BnaA09T026700TA
Da-Ae: Not available
RB: BnaA09T032300RB
No2127: BnaA09T0036300NO
P130: BnaA09G003080P130.1
Length: 409
KOG ID: KOG3049
KOG E-value: 1.870000e-180
KOG Score: 504.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006099(tricarboxylic acid cycle)
Cellular Component: -
Molecular Function: GO:0051536(iron-sulfur cluster binding),GO:0009055(electron transfer activity),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K00235 SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
NR Protein: XP_013725046.1
NR E-value: 5.000000e-155
NR Score: 552.7
NR Annotation: XP_013725046.1 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial [Brassica napus]
SwissProt Protein: Q8LBZ7|SDHB1_ARATH
SwissProt E-value: 7.930000e-180
SwissProt Score: 504.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2
CDS Sequence (1247 bp)
ATGGCGTCCGGTTTAATCGGAAGATTAGTTAGAACCAAACCGGCGAAACTAACCTCAACGGCGAGGTTGA
TCCCGTCGCGATGTACATCCTCCGCAACGGAATCAAAACCTTCGTCCTCCGGCGGCGGCGGGAGAGGATC
GAACCTGAAGACGTTCCAGATCTACCGGTGGAATCCCGATAGCCCCGGGAAGCCTCAGCTCCAAGACTAC
CAGATCGATCTCAAGGACTGTGGCCCGATGGTTCTCGACGCTCTGATCAAGATCAAAAACGAGATGGATC
CGTCGCTCACCTTCCGCCGCTCCTGCCGCGAAGGGATCTGCGGCTCGTGCGCGATGAACATCGACGGGTG
CAACGGGCTCGCGTGTCTGACGAAGATCGAAGACGGAGCTAAGGAGACGACGATCACGCCCTTGCCGCAT
ATGTTCGTGATCAAGGATCTGGTGGTGGACATGACGAATTTTTATAATCAGTACAAGAGTATCGAGCCGT
GGCTGAAGAGGAAGAGTCCGGCGTCTGAGCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGGGCGAA
GCTTGATGGGATGTATGAGTGTATTCTCTGTGCTTGTTGTAGTACCTCGTGTCCTAGTTATTGGTGGAAC
CCTGAGTGTTACCTTGGCCCTGCCGCTTTGCTTCACGCAAACAGGTGGATAAGCGACAGTCGGGACGAGT
ACACAAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTATACCGTTGCCATACAATCTTGAACTG
TGCCCGTGCCTGTCCAAAGGATCATCTCAAAATAGCACTTGCCCACCCTGAAGTTCCTTTCTACTTGTAC
ACAACTCCGAAGAAGAAGCCGATCAAGGATTTCTCACAAGACTTCTACTCTGCTGGGTTCATTCCTGGAG
CTATTCTCTACTTTGCAAACGATCTACCAAAAGTCTTTCGCAGATGCTGCTGCCATTTTAACTCCTTCCT
GTCCCTGAAAGATATAGAGCTCGTTAGCATTTTCATGTTCCTGTCTCGTGCTGAAGTTGAAACTAGAAAC
ATGATCATGGATAATGGGACGCTCGAGCTCAACCACTACCACTCTCGATTCTCAAAAATCACGATCATAC
TGTCTCCACCACTTCAACAATTCTACATAAAAGTCTATTTTGCCTTCGACTTTTCTCGCGGGCACCTAAC
TTCTTTCGTCGCAGGTTTGTGTGTTCTTGTGAGAGTGTGA
Upstream Sequence
ATGGCGTCCGGTTTAATCGGAAGATTAGTTAGAACCAAACCGGCGAAACTAACCTCAACGGCGAGGTTGA
TCCCGTCGCGATGTACATCCTCCGCAACGGAATCAAAACCTTCGTCCTCCGGCGGCGGCGGGAGAGGATC
GAACCTGAAGACGTTCCAGATCTACCGGTGGAATCCCGATAGCCCCGGGAAGCCTCAGCTCCAAGACTAC
CAGATCGATCTCAAGGACTGTGGCCCGATGGTTCTCGACGCTCTGATCAAGATCAAAAACGAGATGGATC
CGTCGCTCACCTTCCGCCGCTCCTGCCGCGAAGGGATCTGCGGCTCGTGCGCGATGAACATCGACGGGTG
CAACGGGCTCGCGTGTCTGACGAAGATCGAAGACGGAGCTAAGGAGACGACGATCACGCCCTTGCCGCAT
ATGTTCGTGATCAAGGATCTGGTGGTGGACATGACGAATTTTTATAATCAGTACAAGAGTATCGAGCCGT
GGCTGAAGAGGAAGAGTCCGGCGTCTGAGCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGGGCGAA
GCTTGATGGGATGTATGAGTGTATTCTCTGTGCTTGTTGTAGTACCTCGTGTCCTAGTTATTGGTGGAAC
CCTGAGTGTTACCTTGGCCCTGCCGCTTTGCTTCACGCAAACAGGTGGATAAGCGACAGTCGGGACGAGT
ACACAAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTATACCGTTGCCATACAATCTTGAACTG
TGCCCGTGCCTGTCCAAAGGATCATCTCAAAATAGCACTTGCCCACCCTGAAGTTCCTTTCTACTTGTAC
ACAACTCCGAAGAAGAAGCCGATCAAGGATTTCTCACAAGACTTCTACTCTGCTGGGTTCATTCCTGGAG
CTATTCTCTACTTTGCAAACGATCTACCAAAAGTCTTTCGCAGATGCTGCTGCCATTTTAACTCCTTCCT
GTCCCTGAAAGATATAGAGCTCGTTAGCATTTTCATGTTCCTGTCTCGTGCTGAAGTTGAAACTAGAAAC
ATGATCATGGATAATGGGACGCTCGAGCTCAACCACTACCACTCTCGATTCTCAAAAATCACGATCATAC
TGTCTCCACCACTTCAACAATTCTACATAAAAGTCTATTTTGCCTTCGACTTTTCTCGCGGGCACCTAAC
TTCTTTCGTCGCAGGTTTGTGTGTTCTTGTGAGAGTGTGA
Downstream Sequence
GGTGAGTTAAACAATTGGAATGTGGTTCATTCCAAGTCTCTATTGGTGTGGGGAGTTGAT
TTTTAACCGAGTTAATAGTTAAAGTTTTGATTTTTCATTGTGTTTGTAACAATAATGGTA
GAATCTGCTTTGAGAGTTTGCATGAATGGGGTTGAAGATTCATGTATCTTGTTGTTAGCT
GCATTGATTCTACTTATGTGGTTCATTCCAAGTCTACTTTGTGGTAGAATCTGCTTTGAG
AGTTTGCATGTGTGGTTGAAGATTCGTGTATCTTTGTTGTTAGCTGCATTGATTCTACTT
ATGTGGTTCATTCAAGTCTATTTTGTTGTCTTGGTGGTTTCGAATCTATCTATGTTTTGT
CGCGTGTTCAGTGTTTTGGTTTGGGAAGTTGATTTTAACAGAGTTAGTTAGCCAGATAAA
GTTTTGATTTTTCGATGTGTTTGTAACTACAATCTTAGAATCTGCTTTGAAAATTAGCTT
GACTGGTTGAAGATTCGTGTATCTGTTGTTAGCACTTAGCTGCATTGATTTAACTTATGT
GGTTCACTCAGGTCTGTTATGTTGCCTTGGTCTTTCGAAACTATGTCTTTGTTGTGTGCT
GGGAAGTTGATTTTTACCGAGTTAGTAGATAAAGTTTTGATTTTTCGATGTGTTTGTAAC
GGAGATACTTGTTCACGTTGTTGTAGGTGGATAAGCGACAGTCGGGACGAGTACACAAAG
GAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTATACCGTTGCCATACAATCTTGAAC
TGTGCCCGTGCCTGTCCAAAGGGTTTGAACCCTGGCAAACAGATCGCACACATCAAGCAA
CTTCAGCGTTGAACAGCTTCTTTTATGCATTTTTTTTTGGTGGTACTCGTTGGGAAACTC
ATCACCCTTTTTAAAGTTTGAAGTTAATAATCTTTCACAAAACTTTCGGCTTTTCTATTG
ATTCTTGTATTGTTGTTGCCAAATATTAGCACCTGAAAAGAAAGCTCTTTTGCAAGACCT
CCCACGTAGATGAGCTTTGTGGTTGTATTCTTGATGATCTCTCTCTCTCAGTAATAAAAC
TCCAGAAAACTTCACATCATCTAGTCTTTTGTGTTTTATCTCCTTAGTCTTAATAAACAT
GTCATGCACTTGTATCTACAAGAAACTGCTCGTCGTGCTAATCTCACTAAAGGTCCTTAT
TCACTTTTCAAAACATTGTTAATCTTGTTCCATGCTGACCATTTATAGATACTATCTAGG
CTGTAATCCGGGTTCGTTTTCCTGATAATCACACATTGGAGGCAACATTTCATCCCTCTG
AAAAAGATCCAATCTTTGGTAGATCATCTCAAAATAGCACTTGCCCACCCTGAAGTTCCT
TTCTACTTGTGTATGTTTCAATTACTCTGGTTTCAAGCCTTTACATTTCTCAACATAGGA
GAAACCTTATGGGATAGTACTTACTTTTGTAGACACAACTCCGAAGAAGAAGCCGATCAA
GGATTTCTCACAAGACTTCTACTCTGCTGGGTTCATTCCTGGAGCTATTCTCTACTTTGC
AAACGATCTACCAAAAGGTTAGTTTGTGTCAATACCTTCACATGGTACTAAAGGCTTCTT
CTTTCTGTTCGGAACTTGTATGCATTGCGATATGTATTGGAGTAAGTGAGATTTGTGTGA
GAAACCTAAAACTATCCTTGTGGAATTTTCAGAAGAAGCGTGCAAACTTAGCATAAACAA
TAATCTTAGAAGACTGGTTAAGCCGGGTGTGTCAGATAGATTCTATGTTGCTGATTTATT
TACTACTTGAAAAGTGTTTGTTGGGAAGATAACTTGAGCTCTGAACTTATATTTATATAT
TCCAAATAGTCTTTCGCAGATGCTGCTGCCATTTTAACTCCTTCCTGTCCCTGAAAGATA
TAGAGGTTATATGACCCACAGAAGAAAAACCAGTTGGACCATCTTCAGAGCCAGCCACAA
CCGATGCTGGTCCGTTACCA
Pro Sequence
MASGLIGRLVRTKPAKLTSTARLIPSRCTSSATESKPSSSGGGGRGSNLK
TFQIYRWNPDSPGKPQLQDYQIDLKDCGPMVLDALIKIKNEMDPSLTFRR
SCREGICGSCAMNIDGCNGLACLTKIEDGAKETTITPLPHMFVIKDLVVD
MTNFYNQYKSIEPWLKRKSPASEPGKEILQSKKDRAKLDGMYECILCACC
STSCPSYWWNPECYLGPAALLHANRWISDSRDEYTKERLEAIDDEFKLYR
CHTILNCARACPKDHLKIALAHPEVPFYLYTTPKKKPIKDFSQDFYSAGF
IPGAILYFANDLPKVFRRCCCHFNSFLSLKDIELVSIFMFLSRAEVETRN
MIMDNGTLELNHYHSRFSKITIILSPPLQQFYIKVYFAFDFSRGHLTSFV
AGLCVLVRV
mRNA Sequence
ATGGCGTCCGGTTTAATCGGAAGATTAGTTAGAACCAAACCGGCGAAACTAACCTCAACGGCGAGGTTGA
TCCCGTCGCGATGTACATCCTCCGCAACGGAATCAAAACCTTCGTCCTCCGGCGGCGGCGGGAGAGGATC
GAACCTGAAGACGTTCCAGATCTACCGGTGGAATCCCGATAGCCCCGGGAAGCCTCAGCTCCAAGACTAC
CAGATCGATCTCAAGGACTGTGGCCCGATGGTTCTCGACGCTCTGATCAAGATCAAAAACGAGATGGATC
CGTCGCTCACCTTCCGCCGCTCCTGCCGCGAAGGGATCTGCGGCTCGTGCGCGATGAACATCGACGGGTG
CAACGGGCTCGCGTGTCTGACGAAGATCGAAGACGGAGCTAAGGAGACGACGATCACGCCCTTGCCGCAT
ATGTTCGTGATCAAGGATCTGGTGGTGGACATGACGAATTTTTATAATCAGTACAAGAGTATCGAGCCGT
GGCTGAAGAGGAAGAGTCCGGCGTCTGAGCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGGGCGAA
GCTTGATGGGATGTATGAGTGTATTCTCTGTGCTTGTTGTAGTACCTCGTGTCCTAGTTATTGGTGGAAC
CCTGAGTGTTACCTTGGCCCTGCCGCTTTGCTTCACGCAAACAGGTGGATAAGCGACAGTCGGGACGAGT
ACACAAAGGAAAGACTTGAGGCTATTGACGACGAGTTCAAGCTATACCGTTGCCATACAATCTTGAACTG
TGCCCGTGCCTGTCCAAAGGATCATCTCAAAATAGCACTTGCCCACCCTGAAGTTCCTTTCTACTTGTAC
ACAACTCCGAAGAAGAAGCCGATCAAGGATTTCTCACAAGACTTCTACTCTGCTGGGTTCATTCCTGGAG
CTATTCTCTACTTTGCAAACGATCTACCAAAAGTCTTTCGCAGATGCTGCTGCCATTTTAACTCCTTCCT
GTCCCTGAAAGATATAGAGCTCGTTAGCATTTTCATGTTCCTGTCTCGTGCTGAAGTTGAAACTAGAAAC
ATGATCATGGATAATGGGACGCTCGAGCTCAACCACTACCACTCTCGATTCTCAAAAATCACGATCATAC
TGTCTCCACCACTTCAACAATTCTACATAAAAGTCTATTTTGCCTTCGACTTTTCTCGCGGGCACCTAAC
TTCTTTCGTCGCAGGTTTGTGTGTTCTTGTGAGAGTGTGA