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Detail for ZS11_A09G07060.t1

Genome:
ZS11: ZS11_A09G07060.t1
ZS11_v0: BnaA09T0072800ZS
WE: WE_A09G07140.t1
WE_v0: BnaA09T0064600WE
Darmor: A09p07010.1_BnaDAR
BH: BnaA09T068500BH
Quinta: BnaA09T0065000QU
ZS2: BnaA09T069800ZS2
SW: BnaA09T098300SW
Express61: A09p005900.1_BnaEXP
Xiaoyun: BnaA09G0067800XY
P202: BnaA09G006420P202.2
BL: BnaA09T068500BH
TA: BnaA09T063000TA
Da-Ae: Not available
RB: BnaC07T401100RB
No2127: BnaC09T0033500NO
P130: BnaA09G006340P130.1
Length: 458
KOG ID: KOG1436
KOG E-value: Not available
KOG Score: 825.0
KOG Annotation: Nucleotide transport and metabolism
Biological Process: GO:0006207('de novo' pyrimidine nucleobase biosynthetic process)
Cellular Component: GO:0016020(membrane),GO:0005737(cytoplasm)
Molecular Function: GO:0004152(dihydroorotate dehydrogenase activity),GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors)
KEGG Ortholog: K00254 DHODH, pyrD; dihydroorotate dehydrogenase [EC:1.3.5.2]
NR Protein: XP_013661056.1
NR E-value: 5.300000e-262
NR Score: 908.3
NR Annotation: XP_013661056.1 dihydroorotate dehydrogenase (quinone), mitochondrial [Brassica napus]
SwissProt Protein: P32746|PYRD_ARATH
SwissProt E-value: Not available
SwissProt Score: 872.0
SwissProt Annotation: Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PYRD PE=1 SV=2
CDS Sequence (1396 bp)
ATGGCCGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGGTCTCGTCGA
ATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCATCCTCTACACCTAAAGTCCCTCACTTTTCCAA
GAAAGGAAGGATATTGACAGGAGCTACCATTGGTTTGGCTATAGCTGGAGGAGCTTATGTGAGCACTGCA
GATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTCTTG
ACGCTGAGTTTGCTCATAAGCTGGCCGTCACTGCGGCTTCACGCGGTTGGGTGCCTAGAGAGAAGAGGCC
TGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGACTCGCTGCTGGA
TTCGACAAAAACGCTGAAGCTACAGAAGGGTTGCTAGGACTTGGGTTTGGATCCGTTGAGGTTGGCTCTG
TGACTCCAGTCCCACAAGAAGGCAACCCCAAACCACGCATCTTCAGATTACGTGAAGATGGAGCCATTAT
CAATAGGTGTGGATTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCTCAGCATGGTAAA
AGAATGTTGGCGGAGACGTCAGGTACATCGTCATCTCCAAGCGATGAAGCTAAACCGGGAGGCAAATCTG
GACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACTAGTGAAGATGCAGCTGCTGATTATGTCCA
AGGAGTTCATAATTTATCCCAGTATGCTGATTACTTGGTTATTAATGTGTCATCACCAAACACAGCAGGG
CTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGGTTCAAGCTGCTAGGGATGAGA
TGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTGTCCAGAGGAGAGCT
TGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATCATATCGAATACAACAGTCTCG
AGGCCAGATCCTGTAAGCAACAACCCTGTGGCGACAGAGACAGGTGGGTTGAGTGGGAAACCGCTCTTTA
ATCTCTCCACCAACATGTTAAGAGAGATGTACACTCTGACGCGAGGTAAGATTCCACTGATAGGCTGCGG
TGGTGTTAGCAGTGGCGAAGATGCTTATAAGAAGATAAGAGCCGGAGCTACTCTTGTTCAGCTGTACACT
GGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAAGAACTGGTGAGTTGTTTAGAAAGGG
ATGGGTTCAAGTCGATTCAAGAAGCAATTGGTGCAGATCACAGATGA
Upstream Sequence
AGCAAAGACTGAAAGATTCTTTGAAACCAGACCAACGCATAGCGTCACCTCTGTTCAAGCCGTGGAGCTT
AAAAGCTAAAACCCTCTTCTTACAGTTATCTAGATTGTCTGAAAAAAGTCAAATCCTTTTTGAATTCAGT
TTGCTAAATGGCCGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGGTC
TCGTCGAATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCATCCTCTACACCTAAAGTCCCTCACT
TTTCCAAGAAAGGAAGGATATTGACAGGAGCTACCATTGGTTTGGCTATAGCTGGAGGAGCTTATGTGAG
CACTGCAGATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCT
CTTCTTGACGCTGAGTTTGCTCATAAGCTGGCCGTCACTGCGGCTTCACGCGGTTGGGTGCCTAGAGAGA
AGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGACTCGC
TGCTGGATTCGACAAAAACGCTGAAGCTACAGAAGGGTTGCTAGGACTTGGGTTTGGATCCGTTGAGGTT
GGCTCTGTGACTCCAGTCCCACAAGAAGGCAACCCCAAACCACGCATCTTCAGATTACGTGAAGATGGAG
CCATTATCAATAGGTGTGGATTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCTCAGCA
TGGTAAAAGAATGTTGGCGGAGACGTCAGGTACATCGTCATCTCCAAGCGATGAAGCTAAACCGGGAGGC
AAATCTGGACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACTAGTGAAGATGCAGCTGCTGATT
ATGTCCAAGGAGTTCATAATTTATCCCAGTATGCTGATTACTTGGTTATTAATGTGTCATCACCAAACAC
AGCAGGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGGTTCAAGCTGCTAGG
GATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTGTCCAGAG
GAGAGCTTGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATCATATCGAATACAAC
AGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGTGGCGACAGAGACAGGTGGGTTGAGTGGGAAACCG
CTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTCTGACGCGAGGTAAGATTCCACTGATAG
GCTGCGGTGGTGTTAGCAGTGGCGAAGATGCTTATAAGAAGATAAGAGCCGGAGCTACTCTTGTTCAGCT
GTACACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAAGAACTGGTGAGTTGTTTA
GAAAGGGATGGGTTCAAGTCGATTCAAGAAGCAATTGGTGCAGATCACAGATGA
Downstream Sequence
GTAAGCAGCTTTGATGGAATCTCTTTATTAAAATTAATCTCTTTTATAATCAAATGCTTA
GGTTTAGTAGAATTAGATCATGTTGGCTCATACCTGAGCAAATCAGTTATCTCAGGTCTC
AAGTTAGTTAGCTTTGTCTTGTCTTGAAATCTCTTTAGGGAAGGATATTGACAGGAGCTA
CCATTGGTTTGGCTATAGCTGGAGGAGCTTATGTGAGCACTGCAGATGAAGCAACCTTCT
GGTACTTAAACTTAATAAGTGTCTGAGACATTAGTCACATTAACATGTCTTTGTCTTTTG
ATCTCATTGTTAATTTAGTGTTTTAAAAATCGGTTTAGGCGGGCGCCTAGTCAGCAAATC
GGACCTAAACAAAACGATTTTTCTAGACTAATTTTTGAAAAAAATTGGTCTAAGAAACTT
AAAAAATGGTCGATGCACCCATCTAACGGCGCCGCCTAGCGATTTCTTGAACATTATTTT
ACATAATCACATTTTTTTTTACCTTTTGTTCCATATTGTGTGTTGGACAGTGGGTGGCTG
TTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTCTTGACGCTGAGTTTGCTCAT
AAGCTGGCCGTCACTGCGGCTTCACGCGGTTGGGTGCCTAGAGAGAAGAGGCCTGATCCA
CAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGACTCGCTGCT
GGATTCGACAAAAACGCTGAAGCTACAGAAGGGTTGCTAGGACTTGGGTTTGGATCCGTT
GAGGTTGGCTCTGTGACTCCAGTCCCACAAGAAGGCAACCCCAAACCACGCATCTTCAGA
TTACGTGAAGATGGGTGAGAGAACCTCATATCCACACTTACCTATAATCAAAGGTTCATG
TCTTGATGTGTTGTTGTCCCTTCCAGAGCCATTATCAATAGGTGTGGATTCAACAGTGAA
GGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCTCAGCATGGTAAAAGAATGTTGGCGGAG
ACGTCAGGTACATCGTCATCTCCAAGCGATGAAGCTAAACCGGGAGGCAAATCTGGACCT
GGTATACTTGGAGTCAACCTTGGAAAGAACAAGACTAGTGAAGATGCAGCTGCTGATTAT
GTCCAAGGAGTTCATAATTTATCCCAGTATGCTGATTACTTGGTTATTAATGTGTCATCA
CCAAACACAGCAGGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAG
AAGGTTCAAGCTGCTAGGGATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTT
GTGAAGATTGCTCCTGATCTGTCCAGAGGAGAGCTTGAAGATATTGCAGCTGTGAGTTAG
AGAAAACAAAACTCAAATACTTTCCAAGTAAAATGGCTCTTACAACATTGTATTGTTATT
GGTTTGTGTAGGTTGCTCTTGCTCTCAAGTTGGATGGGCTGGTAAGTTATTTCTTATACA
TGAACTAAACTTCTGTTTCATCAAAGCTTCCTATGATGATGATGATGTTTTTGTTATTGT
CTTGTAGATCATATCGAATACAACAGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGT
GGCGACAGAGACAGGTGGGTTGAGTGGGAAACCGCTCTTTAATCTCTCCACCAACATGTT
AAGAGAGATGTACACTCTGACGCGAGTAAGTTTTTTTTTTGATCAAAGGAGATGATTAAC
TGTTATACCAACCATTTCTGATTTGGGTTATTGGCTATTTTCATGACATTTTACTTAGGG
TAAGATTCCACTGATAGGCTGCGGTGGTGTTAGCAGGTAAGCATCTCAACATGTTTTTAG
ATTGTGAGGAAAACAAAACACAAGAGTTAGATTCAGATGAACTTTTTATGTTTTTTTTTT
CAGTGGCGAAGATGCTTATAAGAAGATAAGAGCCGGAGCTACTCTTGTTCAGCTGTACAC
TGGGTTTGCGTATGGTGGAC
Pro Sequence
MAGRAATSSAKWAREFLLKRVSSNPLGGAIRNCSSSSSTPKVPHFSKKGR
ILTGATIGLAIAGGAYVSTADEATFCGWLFSATKVVNPLFALLDAEFAHK
LAVTAASRGWVPREKRPDPQILGLEVWGRKFSNPIGLAAGFDKNAEATEG
LLGLGFGSVEVGSVTPVPQEGNPKPRIFRLREDGAIINRCGFNSEGIVVV
AKRLGAQHGKRMLAETSGTSSSPSDEAKPGGKSGPGILGVNLGKNKTSED
AAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQAA
RDEMQWGDDGPPPLLVKIAPDLSRGELEDIAAVALALKLDGLIISNTTVS
RPDPVSNNPVATETGGLSGKPLFNLSTNMLREMYTLTRGKIPLIGCGGVS
SGEDAYKKIRAGATLVQLYTGFAYGGPALIPQIKEELVSCLERDGFKSIQ
EAIGADHR
mRNA Sequence
AGCAAAGACTGAAAGATTCTTTGAAACCAGACCAACGCATAGCGTCACCTCTGTTCAAGCCGTGGAGCTT
AAAAGCTAAAACCCTCTTCTTACAGTTATCTAGATTGTCTGAAAAAAGTCAAATCCTTTTTGAATTCAGT
TTGCTAAATGGCCGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGGTC
TCGTCGAATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCATCCTCTACACCTAAAGTCCCTCACT
TTTCCAAGAAAGGAAGGATATTGACAGGAGCTACCATTGGTTTGGCTATAGCTGGAGGAGCTTATGTGAG
CACTGCAGATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCT
CTTCTTGACGCTGAGTTTGCTCATAAGCTGGCCGTCACTGCGGCTTCACGCGGTTGGGTGCCTAGAGAGA
AGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGACTCGC
TGCTGGATTCGACAAAAACGCTGAAGCTACAGAAGGGTTGCTAGGACTTGGGTTTGGATCCGTTGAGGTT
GGCTCTGTGACTCCAGTCCCACAAGAAGGCAACCCCAAACCACGCATCTTCAGATTACGTGAAGATGGAG
CCATTATCAATAGGTGTGGATTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCTCAGCA
TGGTAAAAGAATGTTGGCGGAGACGTCAGGTACATCGTCATCTCCAAGCGATGAAGCTAAACCGGGAGGC
AAATCTGGACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACTAGTGAAGATGCAGCTGCTGATT
ATGTCCAAGGAGTTCATAATTTATCCCAGTATGCTGATTACTTGGTTATTAATGTGTCATCACCAAACAC
AGCAGGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGGTTCAAGCTGCTAGG
GATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTGTCCAGAG
GAGAGCTTGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATCATATCGAATACAAC
AGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGTGGCGACAGAGACAGGTGGGTTGAGTGGGAAACCG
CTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTCTGACGCGAGGTAAGATTCCACTGATAG
GCTGCGGTGGTGTTAGCAGTGGCGAAGATGCTTATAAGAAGATAAGAGCCGGAGCTACTCTTGTTCAGCT
GTACACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAAGAACTGGTGAGTTGTTTA
GAAAGGGATGGGTTCAAGTCGATTCAAGAAGCAATTGGTGCAGATCACAGATGA