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Detail for ZS11_A09G09330.t1

Genome:
ZS11: ZS11_A09G09330.t1
ZS11_v0: BnaA09T0093600ZS
WE: WE_A09G09500.t1
WE_v0: BnaA09T0084500WE
Darmor: C09p10810.1_BnaDAR
BH: BnaA09T095300BH
Quinta: BnaA09T0085300QU
ZS2: BnaA09T090900ZS2
SW: BnaA09T120100SW
Express61: C09p008970.1_BnaEXP
Xiaoyun: BnaA09G0089700XY
P202: BnaA09G008680P202.2
BL: BnaA09T095300BH
TA: BnaA09T084300TA
Da-Ae: Not available
RB: BnaA09T090800RB
No2127: BnaC09T0060000NO
P130: BnaA09G008300P130.1
Length: 154
KOG ID: KOG3389
KOG E-value: 3.090000e-98
KOG Score: 280.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022900(electron transport chain)
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03937 NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4
NR Protein: XP_013741702.1
NR E-value: 1.600000e-82
NR Score: 310.5
NR Annotation: XP_013741702.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Brassica napus]
SwissProt Protein: Q9FJW4|NDUS4_ARATH
SwissProt E-value: 1.310000e-97
SwissProt Score: 280.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1
CDS Sequence (471 bp)
ATGGCGCTTCGTGCTACTCAATCGACTGGCCGTATCGCGGCGGCGACGCTACGGCGTGTAGCTCGACCTT
TATCAACGGACGCGGTGGTGGAATCGGATTACAAGCGTGGGGAGATCGGTAAGGTCTCGGGAATCCCAGA
GGAGCATCTTTCCCGCAAGGTGATAATATACTCACCAGCTAGAACTGCGACTCAGCAAGGATCTGGCAAA
CTTGGCAAATGGAAGATCAACTTCCTCTCCACCTTAAAGTGGGAGAATCCATTGATGGGATGGACTTCTA
CAGGTGACCCTTATGCCAATGTCGGTGACTCCGCTCTTTCTTTTGATTCTGAGGATGCTGCCAAGTCCTT
TGCTGAGCGTCATGGCTGGGATTATACTGTCAAGAAACCCAAAACGCCACTACTGAAGCCCAAGTCTTAC
TCGGACAACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAAGTGA
Upstream Sequence
GCTGAAATGAAAATTCACCATTCTATAATAATATAAAAATTAGTAAGAGAGTTGTTTCCAGAGATTTCTC
CATTTTGCGTGACACGATGGCGCTTCGTGCTACTCAATCGACTGGCCGTATCGCGGCGGCGACGCTACGG
CGTGTAGCTCGACCTTTATCAACGGACGCGGTGGTGGAATCGGATTACAAGCGTGGGGAGATCGGTAAGG
TCTCGGGAATCCCAGAGGAGCATCTTTCCCGCAAGGTGATAATATACTCACCAGCTAGAACTGCGACTCA
GCAAGGATCTGGCAAACTTGGCAAATGGAAGATCAACTTCCTCTCCACCTTAAAGTGGGAGAATCCATTG
ATGGGATGGACTTCTACAGGTGACCCTTATGCCAATGTCGGTGACTCCGCTCTTTCTTTTGATTCTGAGG
ATGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGATTATACTGTCAAGAAACCCAAAACGCCACTACT
GAAGCCCAAGTCTTACTCGGACAACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAAGTGATGATGATCT
TACATATTCTTCTTCCTCCATTTCTCGGAGCAAAAGGAGAGACCTCATTTGATAAATAAAAAGAAAGCTC
TCATGGTTTCTTTCTTTTATTTTTTAGCATCTGTGAGCTTTTTCTCTGAACTAATATTATCCATGGTTGG
ATTCTTTCCGTATGTTTCCTTATCATAACAATAATATGACGATTGATTAAACATTCTTCTGATGTTTCAT
CAAGATTTCTGGTCAAATCAATCTTCTCA
Downstream Sequence
GGTAAAAGCTAAAAGCATTCGAATTTATTGAATTAGTCTTTTTTTTTTTTTTTGGGGGAG
AAATTGAGATAGATGGGGTGATCTTTGGCAGGTGATAATATACTCACCAGCTAGAACTGC
GACTCAGCAAGGATCTGGCAAACTTGGCAAATGGAAGATCAACTTCCTCTCCACCTTAAA
GTATCTTCCTTCAATCTATTTTTGTTTTGTTTTGTAATTAACTTAAAAAAAAAAAAAAAA
GATAATCTGTGGATTCACCGAGTCTTATGATATGTTTGTTAGGTGGGAGAATCCATTGAT
GGGATGGACTTCTACAGGTGACCCTTATGCCAATGTCGGTGACTCCGCTCTTTCTTTTGA
TTCTGAGGATGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGATTATACTGTATGTTT
CCTTCTTTGTTATATGTTTTTTTATATTTTTATGAGAGTGTGTCACGTTCCTGAGTCTCA
TGGCAGGTCAAGAAACCCAAAACGCCACTACTGAAGGTTAGTATCTATCTTTTTTTTTTT
AGCTAATTCCACTGGATGTTGATTTGTTTTTTTTTTAACTCATCATCATACTGCTCATCA
CGCTAGTGCATAATATGAAGAGACATGTTACTTATGATGGTTGTTCTCATCTAACCATAA
ACTGCAGCCCAAGTCTTACTCGGACAACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAA
GTGATGATGATCTTACATATTCTTCTTCCTCCATTTCTCGGAGCAAAAGGAGAGACCTCA
TTTGATAAATAAAAAGAAAGCTCTCATGGTTTCTTTCTTTTATTTTTTAGCATCTGTGAG
CTTTTTCTCTGAACTAATATTATCCATGGTTGGATTCTTTCCGTATGTTTCCTTATCATA
ACAATAATATGACGATTGATTAAACATTCTTCTGATGTTTCATCAAGATTTCTGGTCAAA
TCAATCTTCTCAATAGTTTTGGTCTCGTTTAATTGAAAGAAAGAGAGGGTCAATAAGATA
CCCCTAAGGTCGATTATTAATGAAGCTGAAAATGATTTGAGCCGTTAATTACGTTACGAT
GAACTGCCTAAGGTCTTCATAGCTATGATGATTTTAAACAAACTACCTTTACCATTGAAG
GTATCGAATTTTTTGTATGGCTTAACCATCCAATAATCACCGTTTGGTTAAAACAGCTTA
AACACTTATCATTTGGTTAGTTGCCCGGTGGGTTGCGCCTAACATCTTATCATTGCATGT
ATCGAAAACTTTATGATATTACGTGAAAACTTTACGATAAATCTCGTTCGAGAATACTCA
TAAAAAAATCTCAAATGTTTAAAACGTTAAAGTTTGTTGAAAATATTTATTGAGACTGGA
TCTTCAATAAAGCATCTATGATAAATAACATCGCTTTACACATTAACTTTCAATGTTGTC
GGATAGTGCTTTAAAAATATCTATATGCTTTTAAAAGAGTTCTCTCATGAGGATCCAAAC
TCCGGAATGCTATGCAAAGCTGGCCTCCACCCACCACCACCTCTTCCTCTTCCTCCTCCG
TGACTCGTCCTCATAACACCGTCTCCATCGACTTCTCCGTTAACCTACAACAGACGGTCG
AGTTAAATCAAGCATCCGTAGGGACAAGAATAGTTTAACATGTCTTAGACCAAATCTATG
CATGTGAAAGATGTGCATTGGCATATATGGTCAAGTGACCCCTTAAAAGTCTTACAAAAA
TATTGCATGATCCAAACTAAAACATTTAATTAAAACCTACTTCAAATATTCTACATGACC
CTATAGAAATTTTTTTTACAACTACTGAGCCAGTCATTAAAAAATTATAATGATCAAGGT
AGAGCATGGACATGTGACTTACATTAGCCCCATCTTTTTTTTTGATCCGGATCCATATTC
GGATTCAGGTTGACCGACCCATCTCCTGATCAGTCTTCTTTCTAGGTTTCTTCTTCTTCT
TCAACTCAAGCCCTCCTCCT
Pro Sequence
MALRATQSTGRIAAATLRRVARPLSTDAVVESDYKRGEIGKVSGIPEEHL
SRKVIIYSPARTATQQGSGKLGKWKINFLSTLKWENPLMGWTSTGDPYAN
VGDSALSFDSEDAAKSFAERHGWDYTVKKPKTPLLKPKSYSDNFKWKGNP
QPEK
mRNA Sequence
GCTGAAATGAAAATTCACCATTCTATAATAATATAAAAATTAGTAAGAGAGTTGTTTCCAGAGATTTCTC
CATTTTGCGTGACACGATGGCGCTTCGTGCTACTCAATCGACTGGCCGTATCGCGGCGGCGACGCTACGG
CGTGTAGCTCGACCTTTATCAACGGACGCGGTGGTGGAATCGGATTACAAGCGTGGGGAGATCGGTAAGG
TCTCGGGAATCCCAGAGGAGCATCTTTCCCGCAAGGTGATAATATACTCACCAGCTAGAACTGCGACTCA
GCAAGGATCTGGCAAACTTGGCAAATGGAAGATCAACTTCCTCTCCACCTTAAAGTGGGAGAATCCATTG
ATGGGATGGACTTCTACAGGTGACCCTTATGCCAATGTCGGTGACTCCGCTCTTTCTTTTGATTCTGAGG
ATGCTGCCAAGTCCTTTGCTGAGCGTCATGGCTGGGATTATACTGTCAAGAAACCCAAAACGCCACTACT
GAAGCCCAAGTCTTACTCGGACAACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAAGTGATGATGATCT
TACATATTCTTCTTCCTCCATTTCTCGGAGCAAAAGGAGAGACCTCATTTGATAAATAAAAAGAAAGCTC
TCATGGTTTCTTTCTTTTATTTTTTAGCATCTGTGAGCTTTTTCTCTGAACTAATATTATCCATGGTTGG
ATTCTTTCCGTATGTTTCCTTATCATAACAATAATATGACGATTGATTAAACATTCTTCTGATGTTTCAT
CAAGATTTCTGGTCAAATCAATCTTCTCA