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Detail for ZS11_A09G09900.t1

Genome:
ZS11: ZS11_A09G09900.t1
ZS11_v0: BnaA09T0098400ZS.1
WE: WE_A09G10030.t1
WE_v0: BnaA09T0089700WE.1
Darmor: C07p25030.1_BnaDAR
BH: BnaA09T118000BH
Quinta: BnaA09T0090400QU
ZS2: BnaA09T096300ZS2
SW: BnaC09T073200SW
Express61: A09p008140.1_BnaEXP
Xiaoyun: BnaA09G0095100XY
P202: BnaA09G009150P202.2
BL: BnaA09T118000BH
TA: BnaA09T089500TA
Da-Ae: Not available
RB: BnaA09T096200RB
No2127: BnaC09T0066900NO
P130: BnaA09G008750P130.2
Length: 628
KOG ID: KOG2403
KOG E-value: Not available
KOG Score: 1221.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0022900(electron transport chain)
Cellular Component: -
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0050660(flavin adenine dinucleotide binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K00234 SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
NR Protein: RID44064.1
NR E-value: Not available
NR Score: 1269.2
NR Annotation: RID44064.1 hypothetical protein BRARA_I00885 [Brassica rapa]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1221.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (1913 bp)
ATGTGGCGCTGCGTCTCTCGTAGCCTCCGAGCTCCTTCATCAAGGACCTCACTCTCTGGATCTCGCTTTT
CTAGATTCTTCTCCTCCTCCTCCTCTCAGACGGGTGACTACACGATAGTGGATCACACCTATGACGCGGT
GGTTGTTGGAGCTGGTGGTGCTGGCCTTAGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCT
TGCATTACCAAGCTTTTCCCCACCCGCTCCCATACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGG
GAAACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGA
TCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTT
CCTTTTTCCCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCA
AAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCTGATCGAACTGGACATGCTCTCTTGCATACCTTATA
TGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGT
GATGGCACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCTGCAC
AAACAATTTTGGCCACTGGGGGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGG
AGATGGCAATGCCATGGTTGCACGTGCCGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCA
ACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGATCTCGAGGTGAAGGTGGCATCCTTAGAAATA
GTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTC
CAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCAT
TTGAATCATCTTCCACCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTG
CTGGTGTTGACGTTACTAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATTCC
AACAAATTACCACGGCGAGGTAGTGACCATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATG
GCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATA
TTGTTGTGTTCGGCCGTGCTTGTGCAAATAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACC
TCTAGAGGAGAATGCAGGTAAGAAGACGATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTT
CCTACATCAAGTATCAGATTGAACATGCAGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAG
AAACACTGGAAGAAGGTTGTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGA
TCGGAGTTTGATATGGAACTCTGATCTGATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCGTCC
ATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAA
GGGAGGATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAG
GCCTGTTCACATGGACACTCTCGACGATGAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGA
Upstream Sequence
GGAAGCACCTCGGTGTCTGCTCTCACTCCGTTCGCTCGTGAGTTCATTTCTACGGATTTGCATTGATACA
TACAACTGATCCGCTTGTGTATTCTTCAATACGAAGAAGAAGATGTGGCGCTGCGTCTCTCGTAGCCTCC
GAGCTCCTTCATCAAGGACCTCACTCTCTGGATCTCGCTTTTCTAGATTCTTCTCCTCCTCCTCCTCTCA
GACGGGTGACTACACGATAGTGGATCACACCTATGACGCGGTGGTTGTTGGAGCTGGTGGTGCTGGCCTT
AGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCTTGCATTACCAAGCTTTTCCCCACCCGCT
CCCATACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGGGAAACATGTCTGAAGATGACTGGAGATG
GCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGATCAAGATGCTATCCAGTATATGTGTAGA
GAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTTCCTTTTTCCCGTACTGAAGAGGGTAAAA
TCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCAAAGGTGGTCAGGCCTATCGTTGTGCTTG
CGCTGCTGATCGAACTGGACATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAG
TTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGTGATGGCACTTGCCAGGGTGTAATTGCAC
TAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTGGGGGTTATGG
CAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGGAGATGGCAATGCCATGGTTGCACGTGCC
GGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCAACTGGTATATATGGAGCCGGATGTCTCA
TCACTGAAGGATCTCGAGGTGAAGGTGGCATCCTTAGAAATAGTGAAGGTGAACGTTTTATGGAACGATA
TGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCTATGACTATGGAAATCAGGGAA
GGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGA
AAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTGCTGGTGTTGACGTTACTAAAGAGCCAAT
TCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATTCCAACAAATTACCACGGCGAGGTAGTGACC
ATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTG
TTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAAA
TAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGACG
ATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTGAACATGC
AGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGAT
CGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCTG
ATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCGTCCATAACAATGCATTCAGCGGAAGCACGAA
AGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATAC
ATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGAT
GAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGATTTCTCTTCCCTCAAACAAGCTAAGCAAGCT
GCAGCTCTTCTTTAGGTGTCATCGGAATAATAATATCAGAAGAAAAAGAGGGAACTGGGAGAATACACAA
AGGAGCGTTCCTCGTCCTCTGAGTTTTACATTTTTACACCTGAATGGTTGTGAGTAATAAAATGAGAAAA
ACCGTTAATTTGGTTGGTATAATTCTCTTTGATATCACTTTCTTGTTAGCATTTTCACTGTCTCCGACTA
TTCTCTTTGATATTACTGTTATTTTACCGTGAAAGCCGTGCACGTC
Downstream Sequence
TGTAAGATCTCTCACTTCCTTCTCCTTAGTTTTCCGTTTGTGCATTTGGTTTTATTCAGG
AACCATCGTTTTGAGGATGTTGATCGAGTCCCGTTTCGTAATTGCTTTTGTGCTTATTTT
ATATAATCCATATGTATGTAGCAGACGGGTGACTACACGATAGTGGATCACACCTATGAC
GCGGTGGTTGTTGGAGCTGGTGGTGCTGGCCTTAGAGCGGCCATTGGATTATCTGAGCAT
GGCTTTAACACCGCTTGCATTACCAAGCTTTTCCCCACCCGCTCCCATACCGTCGCTGCT
CAGGTATATTTTTGTTACAATTCGATCATAAAATGGAGTTTGGGTTTTTTCTTTTAGATT
TGATCTTTATGTGATTTGCAGGGTGGTATAAACGCTGCACTGGGAAACATGTCTGAAGAT
GACTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTAATCTCCCT
CCTCCTTGCCTTTTCTATTAGTTAATTGATCTTGCTTTTTAATTGATCTTGAGTTTCTTT
TCTTTTCTTATTTGTGTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCA
AAAGCTGTGATTGAACTTGAGAACTACGGCCTTCCTTTTTCCCGTACTGAAGAGGGTAAA
ATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCAAAGGTGACTTTGTCTAC
ACTCTTATTGACCTTCGACTTATTCTCTTTTTTTTTAGAAAGGATTTTATCATATTGGCT
TTCTTTTTTTATTCTGTCTTCAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCTGATCG
AACTGGACATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAGTT
CTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGTGATGGTATGTATATCGGATA
TCTCTTTATTTTATTTGTACCTTCTGTTAGTATTTATGCAACATTGTTATCCGATCTGCA
GGCACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGC
TCTGCACAAACAATTTTGGCCACTGGGGTGAGCTAATTTTGAGTAGCTTTATATGATAAT
TTTTTTTTCAAGAAGTGCAAATATACTTAACATGATGGCTCATGTTTCTCCCAGGGTTAT
GGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGGAGATGGCAATGCCATG
GTTGCACGTGCCGGTCTTCCACTCCAGGTTTGCCACCTGTTTCGTTTTGAGATTAATGGT
GAACAATGTCTTTTTCGCGCTAATAATGTTATTGTCTAACAACTTTATGCAGGACTTGGA
GTTTGTTCAGTTCCACCCAACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGTTA
GCGTCTTCTCCTCACATGCACGAATCTGTTTTGCAAGATAAAGATTTAATGTGTGTTCGC
GACATTTACATTGTCTATTATACAATTGCAGGATCTCGAGGTGAAGGTGGCATCCTTAGA
AATAGTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCA
AGAGATGTTGTCTCCAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGTATG
CTTTCCTTAGAACTAGTTTTAGTTTTTTGGAGAAACTCTCGTTGCATGTCTTTGTGCTGT
ATCCAAGATTAATTTTGTGATATGTTTAGTTTTTAATACTCATTTTGGATCTGTTGCTAA
TATTGCCAGGACCGCATAAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAG
TTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTGCTGGTGTTGACG
TTACTAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATTCCAA
CAAATTACCACGGCGAGGTA
Pro Sequence
MWRCVSRSLRAPSSRTSLSGSRFSRFFSSSSSQTGDYTIVDHTYDAVVVG
AGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDD
WRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKI
YQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE
YFALDLLMASDGTCQGVIALNMEDGTLHRFRSAQTILATGGYGRAYFSAT
SAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGI
LRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLH
LNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNY
HGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRA
CANRVAEISKPGEKQRPLEENAGKKTIEWLNKLRHSSGSLPTSSIRLNMQ
RIMQNNAAVFRTQETLEEGCQLIDKAWESFEDVQVKDRSLIWNSDLIETI
ELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDE
KVRLEYRPVHMDTLDDEIETFPPKARVY
mRNA Sequence
GGAAGCACCTCGGTGTCTGCTCTCACTCCGTTCGCTCGTGAGTTCATTTCTACGGATTTGCATTGATACA
TACAACTGATCCGCTTGTGTATTCTTCAATACGAAGAAGAAGATGTGGCGCTGCGTCTCTCGTAGCCTCC
GAGCTCCTTCATCAAGGACCTCACTCTCTGGATCTCGCTTTTCTAGATTCTTCTCCTCCTCCTCCTCTCA
GACGGGTGACTACACGATAGTGGATCACACCTATGACGCGGTGGTTGTTGGAGCTGGTGGTGCTGGCCTT
AGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCTTGCATTACCAAGCTTTTCCCCACCCGCT
CCCATACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGGGAAACATGTCTGAAGATGACTGGAGATG
GCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGATCAAGATGCTATCCAGTATATGTGTAGA
GAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTTCCTTTTTCCCGTACTGAAGAGGGTAAAA
TCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCAAAGGTGGTCAGGCCTATCGTTGTGCTTG
CGCTGCTGATCGAACTGGACATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAG
TTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGTGATGGCACTTGCCAGGGTGTAATTGCAC
TAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTGGGGGTTATGG
CAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGGAGATGGCAATGCCATGGTTGCACGTGCC
GGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCAACTGGTATATATGGAGCCGGATGTCTCA
TCACTGAAGGATCTCGAGGTGAAGGTGGCATCCTTAGAAATAGTGAAGGTGAACGTTTTATGGAACGATA
TGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCTATGACTATGGAAATCAGGGAA
GGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGA
AAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTGCTGGTGTTGACGTTACTAAAGAGCCAAT
TCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATTCCAACAAATTACCACGGCGAGGTAGTGACC
ATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTG
TTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAAA
TAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGACG
ATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTGAACATGC
AGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGAT
CGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCTG
ATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCGTCCATAACAATGCATTCAGCGGAAGCACGAA
AGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATAC
ATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGAT
GAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGATTTCTCTTCCCTCAAACAAGCTAAGCAAGCT
GCAGCTCTTCTTTAGGTGTCATCGGAATAATAATATCAGAAGAAAAAGAGGGAACTGGGAGAATACACAA
AGGAGCGTTCCTCGTCCTCTGAGTTTTACATTTTTACACCTGAATGGTTGTGAGTAATAAAATGAGAAAA
ACCGTTAATTTGGTTGGTATAATTCTCTTTGATATCACTTTCTTGTTAGCATTTTCACTGTCTCCGACTA
TTCTCTTTGATATTACTGTTATTTTACCGTGAAAGCCGTGCACGTC