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Detail for ZS11_A09G23880.t1

Genome:
ZS11: ZS11_A09G23880.t1
ZS11_v0: BnaA09T0215000ZS
WE: WE_C09G31250.t1
WE_v0: BnaC07T0256200WE
Darmor: A09p23130.1_BnaDAR
BH: BnaA09T262100BH
Quinta: BnaA09T0200800QU
ZS2: BnaA09T216200ZS2
SW: BnaA09T257300SW
Express61: A06p036860.1_BnaEXP
Xiaoyun: BnaC09G0254400XY
P202: BnaA09G023750P202.1
BL: BnaA09T262100BH
TA: BnaA09T208000TA
Da-Ae: Not available
RB: BnaA09T229600RB
No2127: BnaA09T0149600NO
P130: BnaC09G027150P130.2
Length: 125
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013728296.1
NR E-value: 4.600000e-67
NR Score: 258.8
NR Annotation: XP_013728296.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Brassica napus]
SwissProt Protein: Q9FGK0|NDUB8_ARATH
SwissProt E-value: 5.700000e-73
SwissProt Score: 216.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1
CDS Sequence (383 bp)
ATGGCAGGAAGACTGAGCGGTGTGGCCTCACGAATCATGGGGGGAAACGGCGTCGTTGCCCGATCTGGCG
CCTCTTCTCTGCGCCAACGCGCCGGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCCGACAAGCCGCT
TTCGGTTAACGACGAGCTGATGTGGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTGATCGAATCGCT
GATACTGTTGGGAAGTATGAAGCATTGGGATGGTTGTGTGGCGGTCTAGGGTTCTTTGCGACTCTAGGTC
TCCTCGCTGTTGTCAACGATAAAGCTTCAAAGGTTCCCTTTACACCACGAGTGTATCCGTATGACAACCT
GAGAGTGGAGCTTGGAGGAGAGCCATAG
Upstream Sequence
TTGTTACGACGCCGTTTACAGACGTTGGTCAGGGCCATATGCCGTCCATCTAAAATCGATTGATCTCCTG
AGAAGAGAAGAGAAACAAAAAGAAGGCTATCGAAAAAGGAAAGGAAAATGGCAGGAAGACTGAGCGGTGT
GGCCTCACGAATCATGGGGGGAAACGGCGTCGTTGCCCGATCTGGCGCCTCTTCTCTGCGCCAACGCGCC
GGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCCGACAAGCCGCTTTCGGTTAACGACGAGCTGATGT
GGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTGATCGAATCGCTGATACTGTTGGGAAGTATGAAGC
ATTGGGATGGTTGTGTGGCGGTCTAGGGTTCTTTGCGACTCTAGGTCTCCTCGCTGTTGTCAACGATAAA
GCTTCAAAGGTTCCCTTTACACCACGAGTGTATCCGTATGACAACCTGAGAGTGGAGCTTGGAGGAGAGC
CATAGAGACACGATCAAGTGATCTGCTCATCAAAACTCTAAGCGTGTTTTCTTCACTGCTTTCTTCTTCA
AAATCTTTTCATTTCCTGCTCACAACTTGGTGACAAAAGAATAAATAGACCCTTTTCATTGTCTGTTGTC
TCTGTAATTAACAGTGACCTTTTGGGTGTATTCATAAGAGAAGACATGTACTTTTCAGTCAATCTAAACT
TGTGTTTGGTTGTGTATACACAAGTGAACACAAAGCAGTAGCAACATGTGTTCATTAAGGGTTTAGCCTC
GTGCGTCTCCAAACAAAGGCAAGGACCATGAGTTTATTAGTCTTCAAGAAACATAATAGTCTAGTTTGAA
TTTTGTTCGAGTGTGGGATAATGAGCTGGATTTGACTTGAACCAATTCAAGTCTATAACAAGAAGGGGTA
AAAAAGTTTAGAGACCAGGTAGTCTACACCTCAGCTGACTG
Downstream Sequence
GGTGAGTCAAATATCTGTAACAAACTAGTTCATATATATTCTTTGATCAGTTTTTGAGGC
TCTTTCTTCGATTGATTGCGTCTCAGCTTTCGGTTAACGACGAGCTGATGTGGGACAACG
GGACTGCGTTCCCAGAGCCTTGCATTGATCGAATCGCTGATACTGTTGGGAAGGTTGGTT
TAGGGTTCGGTTCTCTCACGATTTTACAATCGATTGTGTTTTGTGATTGATTTTGGATTG
AATGGGACAGTATGAAGCATTGGGATGGTTGTGTGGCGGTCTAGGGTTCTTTGCGACTCT
AGGTCTCCTCGCTGTTGTCAACGATAAAGCTTCAAAGGTTCCCTTTGTAAGTGACTTATA
TTTCAACCATTGTATCCTTTATTATTTGATTGATGAGCATGTGTGTACACAGAGTTATTA
GGAACACTTGAAAGAAAGACATACAATGTTCTTGGGAACTCTCTGTTACATGCTTAAGCA
GTTAAGCCACTAGCTAGATGTGTGTCAAGATCTAAAATTTATGAGTTGGCCAAGAATAAT
CATAGACGTTTTATCAAAGTCTGGCTTGATTATGATGAATCTTGTGTTTTTGAAGGATTT
TGAGTTGTGGATGTTGAACAGCAGGCTTTGGGCTTGGAAGATAATGCTCCTTGTCTTCTT
GTTTCTATTCATGAGATTAATTGCTGCTCTTTTTCACTGACATGTCATCTCTCTATTCGT
GTCTTTTTTTTCTTTCCCATTGTGGTGTCTGAGTGTGATTTTGGAGTTATAGAAGTTGAA
CACTCTAGACGTTGTGTCAATAGCTATACTATGATGAGTCTTGTTTTGAAGGACTTTGAG
TTATACAAGTTGAACAGCAGGCTAGGACTCAGAAGATGATGATCTTTGTCTTCTTGTCTA
TATTCATTAGAGCAAGTGTTGTTCACTGACATGTCATCTCTCTGCTCGTGTATTTATTTG
TTTTACCACTTGTTGTGGTACTTGTTCATGATCATCTCCTGTTCTGCTGTTGCTGCAGAC
ACCACGAGTGTATCCGTATGACAACCTGAGAGTGGAGCTTGGAGGAGAGCCATAGAGACA
CGATCAAGTGATCTGCTCATCAAAACTCTAAGCGTGTTTTCTTCACTGCTTTCTTCTTCA
AAATCTTTTCATTTCCTGCTCACAACTTGGTGACAAAAGAATAAATAGACCCTTTTCATT
GTCTGTTGTCTCTGTAATTAACAGTGACCTTTTGGGTGTATTCATAAGAGAAGACATGTA
CTTTTCAGTCAATCTAAACTTGTGTTTGGTTGTGTATACACAAGTGAACACAAAGCAGTA
GCAACATGTGTTCATTAAGGGTTTAGCCTCGTGCGTCTCCAAACAAAGGCAAGGACCATG
AGTTTATTAGTCTTCAAGAAACATAATAGTCTAGTTTGAATTTTGTTCGAGTGTGGGATA
ATGAGCTGGATTTGACTTGAACCAATTCAAGTCTATAACAAGAAGGGGTAAAAAAGTTTA
GAGACCAGGTAGTCTACACCTCAGCTGACTGAACTGAAACTAGATTGATGATAATTATTC
AGATCTACAATCTAAGCGGTGGAATCAAAGACAGACACATGAGTCATGAGATATGATATC
TTTCCAGTGAATAATTGTTCCATTATTTTAATCAATGATTTGATCTGCCTACGGGTCATC
TTTCTTCTGGCTCTCTCTCTTCTCCCTGATTGTTTGGACCTCGTCAAAACTCTTGATAAC
TGTTTGGTTTTCCTTCCTTTTGTTTTCTCTTCGTTGGTTTTCATTTTTTAAACATCTTAA
TCACTAAAAAACACTTACATAGCCCAAGGATAATACTATATTATGTTCGTGTCACATCTA
CAATTGAAATAACTTCCAGATTGTGGTTATTCATAGTTAAATAGACTGAATGTTATCTGG
AGTGAAGAGGCTACAGAAAAGTTACTCTATATCTCTTGAAATTAAATATTTTAAAGATTT
CCCTGTAGTTATAATAATTA
Pro Sequence
MAGRLSGVASRIMGGNGVVARSGASSLRQRAGMGLPVGKHIVPDKPLSVN
DELMWDNGTAFPEPCIDRIADTVGKYEALGWLCGGLGFFATLGLLAVVND
KASKVPFTPRVYPYDNLRVELGGEP
mRNA Sequence
TTGTTACGACGCCGTTTACAGACGTTGGTCAGGGCCATATGCCGTCCATCTAAAATCGATTGATCTCCTG
AGAAGAGAAGAGAAACAAAAAGAAGGCTATCGAAAAAGGAAAGGAAAATGGCAGGAAGACTGAGCGGTGT
GGCCTCACGAATCATGGGGGGAAACGGCGTCGTTGCCCGATCTGGCGCCTCTTCTCTGCGCCAACGCGCC
GGCATGGGTCTCCCCGTCGGCAAACACATCGTCCCCGACAAGCCGCTTTCGGTTAACGACGAGCTGATGT
GGGACAACGGGACTGCGTTCCCAGAGCCTTGCATTGATCGAATCGCTGATACTGTTGGGAAGTATGAAGC
ATTGGGATGGTTGTGTGGCGGTCTAGGGTTCTTTGCGACTCTAGGTCTCCTCGCTGTTGTCAACGATAAA
GCTTCAAAGGTTCCCTTTACACCACGAGTGTATCCGTATGACAACCTGAGAGTGGAGCTTGGAGGAGAGC
CATAGAGACACGATCAAGTGATCTGCTCATCAAAACTCTAAGCGTGTTTTCTTCACTGCTTTCTTCTTCA
AAATCTTTTCATTTCCTGCTCACAACTTGGTGACAAAAGAATAAATAGACCCTTTTCATTGTCTGTTGTC
TCTGTAATTAACAGTGACCTTTTGGGTGTATTCATAAGAGAAGACATGTACTTTTCAGTCAATCTAAACT
TGTGTTTGGTTGTGTATACACAAGTGAACACAAAGCAGTAGCAACATGTGTTCATTAAGGGTTTAGCCTC
GTGCGTCTCCAAACAAAGGCAAGGACCATGAGTTTATTAGTCTTCAAGAAACATAATAGTCTAGTTTGAA
TTTTGTTCGAGTGTGGGATAATGAGCTGGATTTGACTTGAACCAATTCAAGTCTATAACAAGAAGGGGTA
AAAAAGTTTAGAGACCAGGTAGTCTACACCTCAGCTGACTG