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Detail for ZS11_A09G26270.t1

Genome:
ZS11: ZS11_A09G26270.t1
ZS11_v0: BnaA09T0232800ZS
WE: WE_A09G26030.t1
WE_v0: BnaA09T0220000WE
Darmor: A09p25780.1_BnaDAR
BH: BnaA09T288300BH
Quinta: BnaA09T0219200QU
ZS2: BnaA09T237200ZS2
SW: BnaA09T276100SW
Express61: A09p024940.1_BnaEXP
Xiaoyun: BnaA09G0230600XY
P202: BnaA09G025960P202.1
BL: BnaA09T288300BH
TA: BnaA09T227500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11580D
RB: BnaA09T249700RB
No2127: BnaA09T0167000NO
P130: BnaA09G022210P130.1
Length: 579
KOG ID: KOG2495
KOG E-value: Not available
KOG Score: 1104.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006116(NADH oxidation)
Cellular Component: -
Molecular Function: GO:0003954(NADH dehydrogenase activity),GO:0016491(oxidoreductase activity),GO:0005509(calcium ion binding)
KEGG Ortholog: K17871 ndh1; NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]
NR Protein: XP_009114515.1
NR E-value: Not available
NR Score: 1156.7
NR Annotation: XP_009114515.1 PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial [Brassica rapa]
SwissProt Protein: Q94BV7|NDB2_ARATH
SwissProt E-value: Not available
SwissProt Score: 1098.0
SwissProt Annotation: External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB2 PE=1 SV=1
CDS Sequence (1764 bp)
ATGAGGAGGAGTTTCAGTTTCTTCGAGCGATTCTCGAAAGCTTTTCAAGACTATCCTTCCCTCTCCAGGA
TCATCGTCGTCTCCACGATCAGTGGTGGAGGACTTATAGCCTACTCCGAGGCAAATGGAACAAACGGTGT
TGTTGAAACTGGAACCAAGAAGAAGAAGGTGGTGCTGCTCGGAACTGGATGGGCTGGAACTAGTTTCTTG
AAGAACTTGAATAACTCTCAGTATGAGGTTCAGATTATATCGCCTCGTAACTACTTTGCTTTCACTCCCC
TGCTGCCTAGCGTTACTTGTGGCACTGTTGAAGCTCGCAGCGTTGTTGAGCCTATTCGAAACATTGGCAG
AAAGAAGAACGTTGATACGTCTTACCTGGAGGCTGAATGTTTCAAGATTGATCCAGCAAGCAAGAAAGTG
TTCTGCCGATCCAAACAAGGCGTTAGCAGTGGGAAGAAAGAAGAATTTTCTGTTGACTATGACTACCTTG
TAATTGCTACTGGAGCTCAGTCTAACACTTTTAACATACCTGGAGTAGAGGAGAACTGTCATTTTCTCAA
AGAGGTTGAAGATGCTCAAGGAATCCGTAAAAAGGTGATTGATTCCTTTGAGAAGGCAAGTCTACCTGAA
CTAAGCGAAGAAGAGAGGAAGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGCCAACTGGTGTTGAGT
TTGCCGCGGAGCTGCATGATTTTGTTACAGAGGATTTAGTCACACTCTATCCTAAAGCCAAAGATCTAGT
GCGAATCACCCTTCTGGAGGCCGCAGACCACATACTGACCATGTTTGACAAGAGAATCACTGAGTTTGCC
GAAGAAAAGTTTAGCAGAGATGGTATTGATGTGAAACTTGGCTCTATGGTGACCAAAGTGAATGAAAAGG
ATATATCTGCTAAAACCAAAGGAGGAGAGGTTTCATCAATTCCTTATGGTATGATTGTCTGGTCAACTGG
TATTGGAACTCGTCCGGTGATCAAAGATTTTATGAAACAAATTGGTCAGGGTAACAGACGTGCTCTGGCC
ACTGATGAATGGCTTCGCGTGGAAGGTTGTGATAACATATATGCCCTTGGTGATTGCGCTACAATTAACC
AGCGTAAAGTCATGGAAGATGTTTCTGCGATCTTTAGCAAAGCAGACAAAGACAATTCTGGGACGCTGAC
TCTGAAAGAGTTTCAAGAAGCAATGGATGACATTTGTGTTAGATACCCTCAAGTGGAGCTCTACTTGAAG
AGTAAACGTATGCGTGGCATTGCGGATCTTCTAAAGGAAGCTGAAGCTGATGATGGATCCAAGAAGAACA
TAGAGTTGAAGATCGAAGAGTTCAAATCGGCTCTTTCTCAGGTTGACTCGCAAGTGAAGTTTCTTCCAGC
AACAGCACAGGTTGCTGCGCAGCAAGGCACATACCTTGCAAAATGCTTTGATCGTATGGAAGAGTGTGAG
AAGAATCCAGAAGGTCCCATTAGGATGAGAGGAGAAGGTCGTCACCGTTTCCGCCCCTTCAGGTATAGGC
ATTTGGGATCATTTGCACCATTGGGAGGGGAACAAACGGCGGCAGAACTTCCAGGAGATTGGGTTTCTAT
TGGACACAGCAGCCAGTGGCTCTGGTATTCCGTCTATGCCAGTAAGCAAGTGAGCTGGCGCACGAGAGTC
CTTGTGGTTTCTGATTGGATGAGGCGTTTCATCTTTGGTAGAGACTCAAGTAGCATCTGA
Upstream Sequence
GCCCCTCTCTTCTAGATCCCTTTACTTTTCTCTCTTAAAGCAAAACCGTTTTCCTCTGATATTCTTTTCT
TTTTCCAGGATTCCTGGCGTTAGCGAAATACTTTTCGATCTGAATCTAACAAAGAGAAAATGAGGAGGAG
TTTCAGTTTCTTCGAGCGATTCTCGAAAGCTTTTCAAGACTATCCTTCCCTCTCCAGGATCATCGTCGTC
TCCACGATCAGTGGTGGAGGACTTATAGCCTACTCCGAGGCAAATGGAACAAACGGTGTTGTTGAAACTG
GAACCAAGAAGAAGAAGGTGGTGCTGCTCGGAACTGGATGGGCTGGAACTAGTTTCTTGAAGAACTTGAA
TAACTCTCAGTATGAGGTTCAGATTATATCGCCTCGTAACTACTTTGCTTTCACTCCCCTGCTGCCTAGC
GTTACTTGTGGCACTGTTGAAGCTCGCAGCGTTGTTGAGCCTATTCGAAACATTGGCAGAAAGAAGAACG
TTGATACGTCTTACCTGGAGGCTGAATGTTTCAAGATTGATCCAGCAAGCAAGAAAGTGTTCTGCCGATC
CAAACAAGGCGTTAGCAGTGGGAAGAAAGAAGAATTTTCTGTTGACTATGACTACCTTGTAATTGCTACT
GGAGCTCAGTCTAACACTTTTAACATACCTGGAGTAGAGGAGAACTGTCATTTTCTCAAAGAGGTTGAAG
ATGCTCAAGGAATCCGTAAAAAGGTGATTGATTCCTTTGAGAAGGCAAGTCTACCTGAACTAAGCGAAGA
AGAGAGGAAGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGCCAACTGGTGTTGAGTTTGCCGCGGAG
CTGCATGATTTTGTTACAGAGGATTTAGTCACACTCTATCCTAAAGCCAAAGATCTAGTGCGAATCACCC
TTCTGGAGGCCGCAGACCACATACTGACCATGTTTGACAAGAGAATCACTGAGTTTGCCGAAGAAAAGTT
TAGCAGAGATGGTATTGATGTGAAACTTGGCTCTATGGTGACCAAAGTGAATGAAAAGGATATATCTGCT
AAAACCAAAGGAGGAGAGGTTTCATCAATTCCTTATGGTATGATTGTCTGGTCAACTGGTATTGGAACTC
GTCCGGTGATCAAAGATTTTATGAAACAAATTGGTCAGGGTAACAGACGTGCTCTGGCCACTGATGAATG
GCTTCGCGTGGAAGGTTGTGATAACATATATGCCCTTGGTGATTGCGCTACAATTAACCAGCGTAAAGTC
ATGGAAGATGTTTCTGCGATCTTTAGCAAAGCAGACAAAGACAATTCTGGGACGCTGACTCTGAAAGAGT
TTCAAGAAGCAATGGATGACATTTGTGTTAGATACCCTCAAGTGGAGCTCTACTTGAAGAGTAAACGTAT
GCGTGGCATTGCGGATCTTCTAAAGGAAGCTGAAGCTGATGATGGATCCAAGAAGAACATAGAGTTGAAG
ATCGAAGAGTTCAAATCGGCTCTTTCTCAGGTTGACTCGCAAGTGAAGTTTCTTCCAGCAACAGCACAGG
TTGCTGCGCAGCAAGGCACATACCTTGCAAAATGCTTTGATCGTATGGAAGAGTGTGAGAAGAATCCAGA
AGGTCCCATTAGGATGAGAGGAGAAGGTCGTCACCGTTTCCGCCCCTTCAGGTATAGGCATTTGGGATCA
TTTGCACCATTGGGAGGGGAACAAACGGCGGCAGAACTTCCAGGAGATTGGGTTTCTATTGGACACAGCA
GCCAGTGGCTCTGGTATTCCGTCTATGCCAGTAAGCAAGTGAGCTGGCGCACGAGAGTCCTTGTGGTTTC
TGATTGGATGAGGCGTTTCATCTTTGGTAGAGACTCAAGTAGCATCTGAGTATAACATCACCAAAAGGTC
CAAAACTATCTACACATCTCTGTCTCCCCCCTTTATGCTGCCAACCAGCTTACACTTTTAACTTCTCTTT
CTCATGTGAAAAGAGAGTTTTGATTTTTGTTGTTTTTCATTTCGGCTTTACATTTGTAATAAAATAATCA
CTACAAAGATGCGAGGATATTTGCTTCGTTCATTGGTCGTACTCAGAGGTTGCGCTATGTCCTTTCAAAA
ATATATTTTCCATTGCGGTTTTGGTTTTTC
Downstream Sequence
GGTCATCTTCTACGATCCGTACCTCTCTATGTTCCATTTACATGCTTACATGTTCTCGTT
TCCACCTTGTGATCTCTCGAATCTCCCTCTAGCACGTATGACCGTTTGATTTATCAGTTT
CTAAACTTGTTTCAGCTTTGATTTTAAGCAACTCGACGTAGTACATACGTAGTGAACAGA
TTCTCTATGTTGTATGATTCGCACAACTCGACTCGATATGACGTTTCTCGAATCATACGT
TACATTTTCTCGGCAATTCTCCATACTATCTTGGATCTGTGTGAATGTTTGTGGATCTCT
CCAGATCTCTGATTTTGTTTCTGTGTTAAGCTTTCGTTGGCTTGTTTGTGATCTCTCTGT
GTATAACGGAACGATTTGATTCAGATTAGAGTGTACTGATGGTTTATACTGTACGATTGT
TGTAGTGGTGGAGGACTTATAGCCTACTCCGAGGCAAATGGAACAAACGGTGTTGTTGAA
ACTGGAACCAAGAAGAAGAAGGTGGTGCTGCTCGGAACTGGATGGGCTGGAACTAGTTTC
TTGAAGAACTTGAATAACTCTCAGTATGAGGTTCAGATTATATCGCCTCGTAACTACTTT
GCTTTCACTCCCCTGCTGCCTAGCGTTACTTGTGGCACTGTTGAAGCTCGCAGCGTTGTT
GAGCCTATTCGAAACATTGGCAGAAAGGTATTTGTTTCTCTAGTAATGTCTCTCTTTTTC
CATTCTCTGCTTGCTACAGAATAAAACTCTCAATGTTTTGGGTTGTAGTTTATGTATTGA
GGCTTTTTCTGCTTATAAATTCGGTATTTTTGATGAAAAATTGCTGATATGTGCTTGTTT
TTCTTTTCCTGGTAAGCAGAAGAACGTTGATACGTCTTACCTGGAGGCTGAATGTTTCAA
GATTGATCCAGCAAGCAAGAAAGTGTTCTGCCGATCCAAACAAGGCGTTAGCAGTGGGAA
GAAAGAAGAATTTTCTGTTGACTATGACTACCTTGTAATTGCTACTGGAGCTCAGTCTAA
CACTTTTAACATACCTGGAGTAGAGGAGAACTGTCATTTTCTCAAAGTAAGTCATCTCGG
CTCGTATTTATTTTTGCTTCCCCGTGGTATGTTGTTCTGTAAGCAGTGGTAGTTTTTACA
GGTCAGAAGCATAAGGAAGTATATAACTACTGATTATTTGTATGGATGTTCAATTTCTGA
GGCTTTTTATTTGTTTCAATGTATGCTTGTAGGAGGTTGAAGATGCTCAAGGAATCCGTA
AAAAGGTGATTGATTCCTTTGAGAAGGCAAGTCTACCTGAACTAAGCGAAGAAGAGAGGA
AGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGCCAACTGGTGTTGAGTTTGCCGCGG
AGCTGCATGATTTTGTTACAGAGGATTTAGTCACACTCTATCCTAAAGCCAAAGATCTAG
TGCGAATCACCCTTCTGGAGGCCGCAGACCACATACTGACCATGTGAAATTTCTTGCCAC
TTGAATTTCTATATTATGTTTCATGCTTCCATAAACAAAACTTATATAAATGATTCATGT
GTTGCTTTTCTTTCATAGGTTTGACAAGAGAATCACTGAGTTTGCCGAAGAAAAGTTTAG
CAGAGATGGTATTGATGTGAAACTTGGCTCTATGGTGACCAAAGTGAATGAAAAGGATAT
ATCTGCTAAAACCAAAGGAGGAGAGGTTTCATCAATTCCTTATGGTATGATTGTCTGGTC
AACTGGTATTGGAACTCGTCCGGTGATCAAAGATTTTATGAAACAAATTGGTCAGGTAAA
GTAATGTGCTTAGTTAAACTCACACACTACAATCTTCGACATTTTCTAGCAAACACGTTT
AAGAAATTGTCTTTGCAAATTGCAGGGTAACAGACGTGCTCTGGCCACTGATGAATGGCT
TCGCGTGGAAGGTTGTGATAACATATATGCCCTTGGTGATTGCGCTACAATTAACCAGCG
TAAAGTCATGGTACTAGTCT
Pro Sequence
MRRSFSFFERFSKAFQDYPSLSRIIVVSTISGGGLIAYSEANGTNGVVET
GTKKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTC
GTVEARSVVEPIRNIGRKKNVDTSYLEAECFKIDPASKKVFCRSKQGVSS
GKKEEFSVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQGIRKKVI
DSFEKASLPELSEEERKRILHFVVVGGGPTGVEFAAELHDFVTEDLVTLY
PKAKDLVRITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKV
NEKDISAKTKGGEVSSIPYGMIVWSTGIGTRPVIKDFMKQIGQGNRRALA
TDEWLRVEGCDNIYALGDCATINQRKVMEDVSAIFSKADKDNSGTLTLKE
FQEAMDDICVRYPQVELYLKSKRMRGIADLLKEAEADDGSKKNIELKIEE
FKSALSQVDSQVKFLPATAQVAAQQGTYLAKCFDRMEECEKNPEGPIRMR
GEGRHRFRPFRYRHLGSFAPLGGEQTAAELPGDWVSIGHSSQWLWYSVYA
SKQVSWRTRVLVVSDWMRRFIFGRDSSSI
mRNA Sequence
GCCCCTCTCTTCTAGATCCCTTTACTTTTCTCTCTTAAAGCAAAACCGTTTTCCTCTGATATTCTTTTCT
TTTTCCAGGATTCCTGGCGTTAGCGAAATACTTTTCGATCTGAATCTAACAAAGAGAAAATGAGGAGGAG
TTTCAGTTTCTTCGAGCGATTCTCGAAAGCTTTTCAAGACTATCCTTCCCTCTCCAGGATCATCGTCGTC
TCCACGATCAGTGGTGGAGGACTTATAGCCTACTCCGAGGCAAATGGAACAAACGGTGTTGTTGAAACTG
GAACCAAGAAGAAGAAGGTGGTGCTGCTCGGAACTGGATGGGCTGGAACTAGTTTCTTGAAGAACTTGAA
TAACTCTCAGTATGAGGTTCAGATTATATCGCCTCGTAACTACTTTGCTTTCACTCCCCTGCTGCCTAGC
GTTACTTGTGGCACTGTTGAAGCTCGCAGCGTTGTTGAGCCTATTCGAAACATTGGCAGAAAGAAGAACG
TTGATACGTCTTACCTGGAGGCTGAATGTTTCAAGATTGATCCAGCAAGCAAGAAAGTGTTCTGCCGATC
CAAACAAGGCGTTAGCAGTGGGAAGAAAGAAGAATTTTCTGTTGACTATGACTACCTTGTAATTGCTACT
GGAGCTCAGTCTAACACTTTTAACATACCTGGAGTAGAGGAGAACTGTCATTTTCTCAAAGAGGTTGAAG
ATGCTCAAGGAATCCGTAAAAAGGTGATTGATTCCTTTGAGAAGGCAAGTCTACCTGAACTAAGCGAAGA
AGAGAGGAAGAGAATCCTGCATTTTGTGGTTGTTGGTGGTGGGCCAACTGGTGTTGAGTTTGCCGCGGAG
CTGCATGATTTTGTTACAGAGGATTTAGTCACACTCTATCCTAAAGCCAAAGATCTAGTGCGAATCACCC
TTCTGGAGGCCGCAGACCACATACTGACCATGTTTGACAAGAGAATCACTGAGTTTGCCGAAGAAAAGTT
TAGCAGAGATGGTATTGATGTGAAACTTGGCTCTATGGTGACCAAAGTGAATGAAAAGGATATATCTGCT
AAAACCAAAGGAGGAGAGGTTTCATCAATTCCTTATGGTATGATTGTCTGGTCAACTGGTATTGGAACTC
GTCCGGTGATCAAAGATTTTATGAAACAAATTGGTCAGGGTAACAGACGTGCTCTGGCCACTGATGAATG
GCTTCGCGTGGAAGGTTGTGATAACATATATGCCCTTGGTGATTGCGCTACAATTAACCAGCGTAAAGTC
ATGGAAGATGTTTCTGCGATCTTTAGCAAAGCAGACAAAGACAATTCTGGGACGCTGACTCTGAAAGAGT
TTCAAGAAGCAATGGATGACATTTGTGTTAGATACCCTCAAGTGGAGCTCTACTTGAAGAGTAAACGTAT
GCGTGGCATTGCGGATCTTCTAAAGGAAGCTGAAGCTGATGATGGATCCAAGAAGAACATAGAGTTGAAG
ATCGAAGAGTTCAAATCGGCTCTTTCTCAGGTTGACTCGCAAGTGAAGTTTCTTCCAGCAACAGCACAGG
TTGCTGCGCAGCAAGGCACATACCTTGCAAAATGCTTTGATCGTATGGAAGAGTGTGAGAAGAATCCAGA
AGGTCCCATTAGGATGAGAGGAGAAGGTCGTCACCGTTTCCGCCCCTTCAGGTATAGGCATTTGGGATCA
TTTGCACCATTGGGAGGGGAACAAACGGCGGCAGAACTTCCAGGAGATTGGGTTTCTATTGGACACAGCA
GCCAGTGGCTCTGGTATTCCGTCTATGCCAGTAAGCAAGTGAGCTGGCGCACGAGAGTCCTTGTGGTTTC
TGATTGGATGAGGCGTTTCATCTTTGGTAGAGACTCAAGTAGCATCTGAGTATAACATCACCAAAAGGTC
CAAAACTATCTACACATCTCTGTCTCCCCCCTTTATGCTGCCAACCAGCTTACACTTTTAACTTCTCTTT
CTCATGTGAAAAGAGAGTTTTGATTTTTGTTGTTTTTCATTTCGGCTTTACATTTGTAATAAAATAATCA
CTACAAAGATGCGAGGATATTTGCTTCGTTCATTGGTCGTACTCAGAGGTTGCGCTATGTCCTTTCAAAA
ATATATTTTCCATTGCGGTTTTGGTTTTTC