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Detail for ZS11_A09G30170.t1

Genome:
ZS11: ZS11_A09G30170.t1
ZS11_v0: BnaA09T0262100ZS
WE: WE_A09G30230.t1
WE_v0: BnaA09T0248600WE
Darmor: A09p29520.1_BnaDAR
BH: BnaC09T178100BH
Quinta: BnaA09T0247800QU
ZS2: BnaC09T301700ZS2
SW: BnaC09T312900SW
Express61: A09p027680.1_BnaEXP
Xiaoyun: BnaA09G0264700XY
P202: BnaA09G029190P202.1
BL: BnaC09T178100BH
TA: BnaA09T258700TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g37010D
RB: BnaA09T283900RB
No2127: BnaC09T0258100NO
P130: BnaA09G025510P130.1
Length: 243
KOG ID: KOG0715
KOG E-value: 8.550000e-148
KOG Score: 413.0
KOG Annotation: Posttranslational modification, protein turnover, chaperones
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K23051 ndhT; NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [EC:7.1.1.-]
NR Protein: XP_009113533.1
NR E-value: 1.200000e-135
NR Score: 487.6
NR Annotation: XP_009113533.1 PREDICTED: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic [Brassica rapa]
SwissProt Protein: Q9SMS0|NDHT_ARATH
SwissProt E-value: 3.620000e-147
SwissProt Score: 413.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit T, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhT PE=1 SV=1
CDS Sequence (742 bp)
ATGGCTTCTCCAGCTTCCACTTATGCTCGAACTACATGCATTTGTTTTCCAAAAATCCAAAACAGCACGC
AATTCATTGACAGGATGGGAGCATTTAGAAATATAACGAGAAGAAGGGTGAGGCTTATTCACGCATCACA
AGGTCCAACAAAACCATTGCCTGGAGTAGACACAAGAATCCACTGGGAAAACCCGGACGATGGGTGGATC
GGTGGAGGATCCGACACGATCAAACCTGACGATACCAATCTTTTCAGTGATGACAAATTTGCTGAACTAA
TCAAAGATTCTTTTGATTCTCATTACCAATTCTTGGGTGTTTCCACGGATGCTGATCTTGAAGATATAAA
ATCTGCTTACCGGAGATTATCGAAAGAGTATCATCCAGACACAACTTCATTACCACTTAAAACAGCTTCA
GACAAGTTCATGAAACTAAGAGAAGTCTACGATGTTTTGAGCGACGAGGAGAGTAGGAGATTCTATGACT
GGACACTGGCTCAGGAGGTTGCTAGTCGTCAAGCTGAGAAGATGAGAATGAAGCTTGAGGATCCGAAAGA
GCAAGAATTTCGGAATTATGAATCTATACCCGATATGGTTGATCGGTTAGGTGGAAGGAACATGGATCTT
AGTGATCAAGCCATGACTGCCCTTACGTTCGATGTTTTGATCATTGTATTTGCCGTTTGTTGTATAGTCT
ATGTGGTTGTCTTTAAAGATCCTTATTACTAG
Upstream Sequence
CATATATTGAGGCCATGAGACAAGTTTCCACGGCCAAACCGTAACCAAAAACATAAAAAAAGAAAAGAGA
AGAAACAAGCAACAAACTATCTTGAAACACAGTACGCCATGGCTTCTCCAGCTTCCACTTATGCTCGAAC
TACATGCATTTGTTTTCCAAAAATCCAAAACAGCACGCAATTCATTGACAGGATGGGAGCATTTAGAAAT
ATAACGAGAAGAAGGGTGAGGCTTATTCACGCATCACAAGGTCCAACAAAACCATTGCCTGGAGTAGACA
CAAGAATCCACTGGGAAAACCCGGACGATGGGTGGATCGGTGGAGGATCCGACACGATCAAACCTGACGA
TACCAATCTTTTCAGTGATGACAAATTTGCTGAACTAATCAAAGATTCTTTTGATTCTCATTACCAATTC
TTGGGTGTTTCCACGGATGCTGATCTTGAAGATATAAAATCTGCTTACCGGAGATTATCGAAAGAGTATC
ATCCAGACACAACTTCATTACCACTTAAAACAGCTTCAGACAAGTTCATGAAACTAAGAGAAGTCTACGA
TGTTTTGAGCGACGAGGAGAGTAGGAGATTCTATGACTGGACACTGGCTCAGGAGGTTGCTAGTCGTCAA
GCTGAGAAGATGAGAATGAAGCTTGAGGATCCGAAAGAGCAAGAATTTCGGAATTATGAATCTATACCCG
ATATGGTTGATCGGTTAGGTGGAAGGAACATGGATCTTAGTGATCAAGCCATGACTGCCCTTACGTTCGA
TGTTTTGATCATTGTATTTGCCGTTTGTTGTATAGTCTATGTGGTTGTCTTTAAAGATCCTTATTACTAG
GTAAGGAGCTATATACAGGGAAGATGAAATTCAGGGAAATTTGTATAGGTGGAAAATGGAACATTTATAG
ATTATAACATAATCTGATTACAAGTGGTCGTCGTCTAGCCATAGTTAGATTCGGTGACATCGGTATTTGA
CAAATTTGTTACTTTGGTCTGGGC
Downstream Sequence
GTAAGACCTCAAGATACTTGTATTTTTTCCAAATCGAATTACAAATGCTATCTGTATCAT
TGTCAGATTCTTGGGTGTTTCCACGGATGCTGATCTTGAAGATATAAAATCTGCTTACCG
GAGATTATCGAAAGAGTATCATCCAGACACAACTTCATTACCACTTAAAACAGCTTCAGA
CAAGTTCATGAAACTAAGAGAAGTCTACGATGTTTTGAGCGACGAGGAGAGTAGGAGATT
CTATGACTGGACACTGGCTCAGGAGGTTGCTAGTCGTCAAGCTGAGAAGATGAGAATGAA
GCTTGAGGATCCGAAAGAGCAAGAATTTCGGAATTATGAATCTATACCCGATATGGTTGA
TCGGTTAGGTGGAAGGAACATGGATCTTAGTGATCAAGCCATGACTGCCCTTACGTTCGA
TGTTTTGATCATTGTATTTGCCGTTTGTTGTATAGTCTATGTGGTTGTCTTTAAAGATCC
TTATTACTAGGTAAGGAGCTATATACAGGGAAGATGAAATTCAGGGAAATTTGTATAGGT
GGAAAATGGAACATTTATAGATTATAACATAATCTGATTACAAGTGGTCGTCGTCTAGCC
ATAGTTAGATTCGGTGACATCGGTATTTGACAAATTTGTTACTTTGGTCTGGGCTCAATA
TCAATGAAAAATGTTAGTGAGGATGAGACTAGAACATAAAGAGTAAAACGTAAATGACGA
CTAGTTTTTTTTCTTTCAAATTCATAGAACAAGAAAGGAAATTAGACCAATCTGGTAATG
CATAAACTATGTACAATTCTCTTGAATTACCATCGTTATTACAATAAAAAATTATTTAGG
ATAACTCAGTCATAAATTAGACCTCACCATAGAGTCTAAAATTCGATCTATTAGGATCAC
ATGACTCTGAACTAAACTCCCTTGAGTCTAGACTTCAATCTCTCTGAAAATAATTCACCA
ACTATGTCATCACCTAATGCAGAGCAATAACATCAAAATCTTGATCACACAAGCGCCAAA
TATATATCTCTCCGTTTTCTTATTTTGCATAGACAATTTTCTTCATAGAGACACGTCTTC
CTTTTATACCATATATAAAATTGCTACTCAAGATCTTCCGGAGCACTTTAAACAACTTTC
CTTTCTCTTTAGTGGAAAACTTACTCTTCAAATTTCCATATATGTTTATCTTCAAGCACA
TGTTCTTTTTTCCTTTTTCAAGTTTAACAAGTCTACGCACATTACAATACACAAACTCTA
ACACAACCCATCTTCATGACACACACATGTAATACCTCTTGTAATACTTCGCGAACTAAT
ACAAAACCTTATATAAAACTGCATCTTCAATCTTCCCTTTTTTGACTTTGTATGTGAGCT
CATAAACTTTAGATGAAAAAAACATCTTCAATCTCTCTCTATGAATCACATCATAGTCAA
AACTAATATGAAGATCTACATCTGATATTTCATAGTTTGTACTGGTTTTTGACCATGATA
TAAGTCTGGTTTTAGAGTATTTCGTATATATTTTGAGTCTTTTTAGAGTCATTGCATATT
TAGGTTCATTTTGGACAACATTGCAGCTTTTGGAGCAATTTGGAGACTGACGGACCATGA
ACCTGCAAAGATCTAGTTGGATTCAATTTATGAGTCTATGTTTTAATCGACACCACCCTT
GGCCTTAGTCGTCACCCTCCATTTTTTACAAGACATTCCAATTTTAAAGATATTAAAAAG
TTCCAAAGTTTTATTTAATGGCAAAAGAGCCCAATTTGTGTGTTTAGATTATATCTTAAT
TTTTAGAGTTTTTGTAACTTATGCTTGGATACTGAGAGATTAGAGCATGAAGATTTTTGT
GGAGAGAGATCTGAACTCATACCTGTTGAGAGAAGATTTTGAACTCTTTTTTACTCTATT
ATTTAATTACGCAATTTATTCAGATTTTGATTTGTGTTTTCTTGCTCATGTCTGAGTAGT
ACCATTTTTAGATTTAGGGT
Pro Sequence
MASPASTYARTTCICFPKIQNSTQFIDRMGAFRNITRRRVRLIHASQGPT
KPLPGVDTRIHWENPDDGWIGGGSDTIKPDDTNLFSDDKFAELIKDSFDS
HYQFLGVSTDADLEDIKSAYRRLSKEYHPDTTSLPLKTASDKFMKLREVY
DVLSDEESRRFYDWTLAQEVASRQAEKMRMKLEDPKEQEFRNYESIPDMV
DRLGGRNMDLSDQAMTALTFDVLIIVFAVCCIVYVVVFKDPYY
mRNA Sequence
CATATATTGAGGCCATGAGACAAGTTTCCACGGCCAAACCGTAACCAAAAACATAAAAAAAGAAAAGAGA
AGAAACAAGCAACAAACTATCTTGAAACACAGTACGCCATGGCTTCTCCAGCTTCCACTTATGCTCGAAC
TACATGCATTTGTTTTCCAAAAATCCAAAACAGCACGCAATTCATTGACAGGATGGGAGCATTTAGAAAT
ATAACGAGAAGAAGGGTGAGGCTTATTCACGCATCACAAGGTCCAACAAAACCATTGCCTGGAGTAGACA
CAAGAATCCACTGGGAAAACCCGGACGATGGGTGGATCGGTGGAGGATCCGACACGATCAAACCTGACGA
TACCAATCTTTTCAGTGATGACAAATTTGCTGAACTAATCAAAGATTCTTTTGATTCTCATTACCAATTC
TTGGGTGTTTCCACGGATGCTGATCTTGAAGATATAAAATCTGCTTACCGGAGATTATCGAAAGAGTATC
ATCCAGACACAACTTCATTACCACTTAAAACAGCTTCAGACAAGTTCATGAAACTAAGAGAAGTCTACGA
TGTTTTGAGCGACGAGGAGAGTAGGAGATTCTATGACTGGACACTGGCTCAGGAGGTTGCTAGTCGTCAA
GCTGAGAAGATGAGAATGAAGCTTGAGGATCCGAAAGAGCAAGAATTTCGGAATTATGAATCTATACCCG
ATATGGTTGATCGGTTAGGTGGAAGGAACATGGATCTTAGTGATCAAGCCATGACTGCCCTTACGTTCGA
TGTTTTGATCATTGTATTTGCCGTTTGTTGTATAGTCTATGTGGTTGTCTTTAAAGATCCTTATTACTAG
GTAAGGAGCTATATACAGGGAAGATGAAATTCAGGGAAATTTGTATAGGTGGAAAATGGAACATTTATAG
ATTATAACATAATCTGATTACAAGTGGTCGTCGTCTAGCCATAGTTAGATTCGGTGACATCGGTATTTGA
CAAATTTGTTACTTTGGTCTGGGC