SEARCH

DETAIL

Detail for ZS11_A01G43600.t1

Genome:
ZS11: ZS11_A01G43600.t1
ZS11_v0: BnaA01T0380700ZS
WE: WE_C01G59230.t1
WE_v0: BnaA01T0295800WE
Darmor: A01p41890.1_BnaDAR
BH: BnaC01T496700BH
Quinta: BnaA01T0307600QU
ZS2: BnaC01T449100ZS2
SW: BnaC01T283700SW
Express61: C01p035510.2_BnaEXP
Xiaoyun: BnaA01G0375000XY
P202: BnaA05G029140P202.1
BL: BnaC01T496700BH
TA: BnaA01T382500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g35760D
RB: BnaA01T417300RB
No2127: BnaA01T0328300NO
P130: BnaC01G055730P130.1
Length: 630
KOG ID: KOG0042
KOG E-value: Not available
KOG Score: 1191.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006072(glycerol-3-phosphate metabolic process)
Cellular Component: GO:0009331(glycerol-3-phosphate dehydrogenase complex)
Molecular Function: GO:0004368(glycerol-3-phosphate dehydrogenase (quinone) activity),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K00111 glpA, glpD; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
NR Protein: XP_013640891.1
NR E-value: Not available
NR Score: 1239.9
NR Annotation: XP_013640891.1 glycerol-3-phosphate dehydrogenase SDP6, mitochondrial-like [Brassica napus]
SwissProt Protein: Q9SS48|SDP6_ARATH
SwissProt E-value: Not available
SwissProt Score: 1191.0
SwissProt Annotation: Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDP6 PE=1 SV=1
CDS Sequence (1920 bp)
ATGTCAGTCTCTTCCCTCCGCCGTCTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCG
TCTACCTCTCCCCCTCCGTTGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAAACG
TACTCTCGGCGATCCCTCAGCCTCCGTACCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACC
TCTTCTAATCCGCTCGACGTCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTG
CGACACGTGGCCTCCGCGTAGGTCTCGTGGAGCGTGAGGATTTCTCCTCAGGGACGTCTTCACGTTCAAC
CAAGCTAATCCATGGAGGAGTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAG
CTTGTCTTCCACGCGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCC
CTTGTATGACACCTTGTTTCGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTT
GGTGGCGGGACCGCGGTTGTTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCT
ACTCTCGCGAGGAAAGGGAAGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATG
ATTCGCGTTTGAATGTTGGGTTGGCGTGTACTGCTGCTTTAGCTGGTGCTGCGGTTCTCAACCATGCTGA
GGTTGTCTCGCTTATTACGGATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACA
GGCAAAGAGTTTGAGAGCTATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGA
AGATGGTTGATGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTCCCTGATTA
CTATTCACCAGAAGGGATGGGTTTGATAGTTCCTAAAACTAAGGATGGTCGTGTTGTGTTTATGTTACCG
TGGTTGGGAAGAACGGTAGCTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATG
AGGATGAGATTCAGTTTATATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGT
TCTCTCGGCTTGGAGTGGTATACGTCCATTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCA
AGAGACCACGTTGTCTTCGAGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATC
GAAGTATGGCTGAAGATGCGGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGT
AACACAGAAGCTACAGCTTCTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAA
TACGTGCGCATGAAGAAAACATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGC
ATTTGTCTCATGCATACGGTTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAA
ACGGTTGGCGCATGGACATCCGTTTCTTGAAGCAGAGGTTGCGTACTGCGCAAGGCACGAGTACTGCGAG
TCAGCGGTTGATTTTATAGCGAGGAGATGTAGAATCGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGT
TGCAGCGTGTGGTGGAGATTCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGTTGCA
GAAGGCTAAAGAGTTTCTTCAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAAC
TGA
Upstream Sequence
CACCGCACATTTATCCGAAAGGGTGAAAAACGTAATTTAAGGATAATTTGTTATTACAGTGGATTTTTCA
TTCATAATCTTCTTCGCTTCCCAATGCAATCCATTCCCTCCACGATCTTCCATGTCAGTCTCTTCCCTCC
GCCGTCTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCGTCTACCTCTCCCCCTCCGT
TGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAAACGTACTCTCGGCGATCCCTCA
GCCTCCGTACCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACCTCTTCTAATCCGCTCGACG
TCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTGCGACACGTGGCCTCCGCGT
AGGTCTCGTGGAGCGTGAGGATTTCTCCTCAGGGACGTCTTCACGTTCAACCAAGCTAATCCATGGAGGA
GTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAGCTTGTCTTCCACGCGCTCG
AGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCCCTTGTATGACACCTTGTTT
CGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTTGGTGGCGGGACCGCGGTTG
TTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCTACTCTCGCGAGGAAAGGGA
AGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATGATTCGCGTTTGAATGTTGG
GTTGGCGTGTACTGCTGCTTTAGCTGGTGCTGCGGTTCTCAACCATGCTGAGGTTGTCTCGCTTATTACG
GATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACAGGCAAAGAGTTTGAGAGCT
ATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGAAGATGGTTGATGAAGATAC
AAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTCCCTGATTACTATTCACCAGAAGGGATG
GGTTTGATAGTTCCTAAAACTAAGGATGGTCGTGTTGTGTTTATGTTACCGTGGTTGGGAAGAACGGTAG
CTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATGAGGATGAGATTCAGTTTAT
ATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGTTCTCTCGGCTTGGAGTGGT
ATACGTCCATTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCAAGAGACCACGTTGTCTTCG
AGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATCGAAGTATGGCTGAAGATGC
GGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGTAACACAGAAGCTACAGCTT
CTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAATACGTGCGCATGAAGAAAA
CATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCATGCATACGG
TTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGACAT
CCGTTTCTTGAAGCAGAGGTTGCGTACTGCGCAAGGCACGAGTACTGCGAGTCAGCGGTTGATTTTATAG
CGAGGAGATGTAGAATCGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGTTGCAGCGTGTGGTGGAGAT
TCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGTTGCAGAAGGCTAAAGAGTTTCTT
CAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAACTGAAGCTGTCTGCATCTGA
GAAAAAAATTAAAAACTACTCTAATTGAATTTATTATTTTCTTCTATTTCCCAATTGTTGGTGGCTCTTG
GGTACTAGCCACTAGAGATGAGGAATAAATGGTATACGGATGGAATAATACTGCCACTACTCAAATGTTT
ATTGGATTAAACAGAACTTTGATGTGATGTGATGCGATGGAGGACAGAAACAGTCTCTGGTCGGTCGCAG
ATAAAACAGAGTAAATTGTGAATTTCAC
Downstream Sequence
GGTAAGTAAGATCATCTATTAATTTTATGTTATATATACTTTTCTTTTATATTTTATAGA
TTGTTTTTCTATTGGTTGGATCGTGGTTAGTTAGATAATGGTTAGTTAGATAAGTAACTC
TACATTTTAATTAAATGATTTTATATTTAGTTTGTGTAcataattctaaaaactcgatta
gtaaatactccctcggtttcttaaagatATATATTATAAAGAAAAATTTTGTTTCTAAAA
AATTCATTTTTTACATTTTCAATACATGTTTTATTAACTAATTATAAACTTCAAAAATCT
TAATTGCATTAATTAATTTTTTTTATTGACTTAAAATTGTGGAAAAAAGATAGACACAAA
AAATTATGCAAATTTAATATATTTTATTAAAATGTGTGAAAAAACTAGAATATGGATATT
TTATGAACAGAGGGAATATTATTTTCATTTAATCTTGTTCTTATTTTTTATAACTAAATA
TTTATTTGATTAGGAGTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAG
CTAAAGCTTGTCTTCCACGCGCTCGAGGAGCGTAAACAGCTCATCGAGAACGCGCCCCAT
CTCTGCCACGCGCTCCCTTGTATGACACCTTGTTTCGACTGGTTCGAAGTGGTCTACTAC
TGGATGGGGCTGAAGATGTACGACTTGGTGGCGGGACCGCGGTTGTTGCATCTGTCTAGG
TACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCTACTCTCGCGAGGAAAGGGAAGGAC
AAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATGATTCGCGTTTGAAT
GTTGGGTTGGCGTGTACTGCTGCTTTAGCTGGTGCTGCGGTTCTCAACCATGCTGAGGTT
GTCTCGCTTATTACGGATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAAT
CTCACAGGTAGTACAATAACTTGCAACTTATTGAGTTTAGTATATAACTTCTGCAGTTAA
TGTGATGGACGCAATGTAAAAATATCACAAAAAATCGATAGGTAGGCGTTTTATAGGAGA
TTTTAATGTGATGGACAATGTAAAAACATCAAAAAAATATGGATAGGCAGTAATTAGGCG
TTTTATAAGAGATTTTGATGTGATTGACGCAATGTAAAATATATTAAAAAAAAAAATCAT
TGATAGGCAGGCGGTAATTAGGTATTTTATAGGAGATTATTGATTAGGCGGGCGTCTAGA
CCGGCAATTAGGCGTTTATAGGAGATTATGAATTAGGCGGGTGCATAGGCTGATTTTTTG
AACACCTAAGCCAATTTACAAGAAAAATCGTTTGGTGTAGGTCCGATTGTTGGCATAGTA
GGAAGGTATTTGTCTAGATGCCGTCTAGACTGATTTTTAGAACTTTTTTTGTTTTGACAG
GCAAAGAGTTTGAGAGCTATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATT
CCATAAGGAAGATGGTTGATGAAGATACAAAGCCTATGATATGTCCAAGCAGCGGTGTAC
ACATTGTGCTCCCTGATTACTATTCACCAGAAGGGATGGGTTTGATAGTTCCTAAAACTA
AGGATGGTCGTGTTGTGTTTATGTTACCGTGGTTGGGAAGAACGGTAGCTGGGACTACAG
ACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATGAGGATGAGATTCAGTTTATAT
TGGATGCAATAAGTGACTATCTTAACATTAAGGTATGTCCAAGTTCAGCTCAGAGATGAA
TGAATAATCAATTTAATTATGGATCATGACATTATGATGTTTCACTAGGTTCGACGTACT
GATGTTCTCTCGGCTTGGAGTGGTATACGTCCATTGGCTATGGATCCAACTGCAAAGAGC
ACAGAGAGTATCTCAAGAGACCACGTTGTCTTCGAGGAACATCCTGGTCTGGTCACTATC
ACTGGTGGAAAATGGACAAC
Pro Sequence
MSVSSLRRLAVSAAVIAAASGGAVYLSPSVASSDRAGGGPVLDSLKRTLG
DPSASVPSRSAQESALIKATSSNPLDVLVIGGGATGSGVALDAATRGLRV
GLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK
QLIENAPHLCHALPCMTPCFDWFEVVYYWMGLKMYDLVAGPRLLHLSRYY
SAQESAELFPTLARKGKDKSLRGTVVYYDGQMNDSRLNVGLACTAALAGA
AVLNHAEVVSLITDDDTKRIVGARVRNNLTGKEFESYARVVVNAAGPFCD
SIRKMVDEDTKPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLP
WLGRTVAGTTDSNTSITPLPEPHEDEIQFILDAISDYLNIKVRRTDVLSA
WSGIRPLAMDPTAKSTESISRDHVVFEEHPGLVTITGGKWTTYRSMAEDA
VNAAIKSGKLSPTNGCVTQKLQLLGSHGWEPSSFTALAQQYVRMKKTYGG
KVVPGAMDTAAAKHLSHAYGSMAERVATIAQEEGLGKRLAHGHPFLEAEV
AYCARHEYCESAVDFIARRCRIAFLDTDAAARALQRVVEILASEHKWDKS
REKQELQKAKEFLQTFKSSKNAQFHDGKHN
mRNA Sequence
CACCGCACATTTATCCGAAAGGGTGAAAAACGTAATTTAAGGATAATTTGTTATTACAGTGGATTTTTCA
TTCATAATCTTCTTCGCTTCCCAATGCAATCCATTCCCTCCACGATCTTCCATGTCAGTCTCTTCCCTCC
GCCGTCTAGCCGTCTCCGCCGCCGTAATCGCCGCTGCATCCGGCGGCGCCGTCTACCTCTCCCCCTCCGT
TGCCTCCAGCGACAGAGCCGGCGGCGGTCCGGTTCTAGATTCGTTGAAACGTACTCTCGGCGATCCCTCA
GCCTCCGTACCGTCTCGATCCGCTCAAGAGTCTGCTCTCATCAAAGCCACCTCTTCTAATCCGCTCGACG
TCCTCGTGATTGGCGGTGGAGCCACCGGCTCTGGAGTGGCTCTCGACGCTGCGACACGTGGCCTCCGCGT
AGGTCTCGTGGAGCGTGAGGATTTCTCCTCAGGGACGTCTTCACGTTCAACCAAGCTAATCCATGGAGGA
GTTCGTTACTTGGAGAAAGCTGTGTTCAATCTCGACTACGGACAGCTAAAGCTTGTCTTCCACGCGCTCG
AGGAGCGTAAACAGCTCATCGAGAACGCGCCCCATCTCTGCCACGCGCTCCCTTGTATGACACCTTGTTT
CGACTGGTTCGAAGTGGTCTACTACTGGATGGGGCTGAAGATGTACGACTTGGTGGCGGGACCGCGGTTG
TTGCATCTGTCTAGGTACTACTCTGCGCAAGAGTCTGCTGAGCTCTTCCCTACTCTCGCGAGGAAAGGGA
AGGACAAGAGCTTGAGGGGGACTGTTGTGTATTACGACGGGCAGATGAATGATTCGCGTTTGAATGTTGG
GTTGGCGTGTACTGCTGCTTTAGCTGGTGCTGCGGTTCTCAACCATGCTGAGGTTGTCTCGCTTATTACG
GATGATGATACCAAGAGAATAGTTGGTGCCAGGGTTCGTAACAATCTCACAGGCAAAGAGTTTGAGAGCT
ATGCGAGAGTAGTAGTTAATGCGGCTGGACCGTTCTGTGATTCCATAAGGAAGATGGTTGATGAAGATAC
AAAGCCTATGATATGTCCAAGCAGCGGTGTACACATTGTGCTCCCTGATTACTATTCACCAGAAGGGATG
GGTTTGATAGTTCCTAAAACTAAGGATGGTCGTGTTGTGTTTATGTTACCGTGGTTGGGAAGAACGGTAG
CTGGGACTACAGACTCTAACACGTCAATAACTCCGCTTCCTGAACCTCATGAGGATGAGATTCAGTTTAT
ATTGGATGCAATAAGTGACTATCTTAACATTAAGGTTCGACGTACTGATGTTCTCTCGGCTTGGAGTGGT
ATACGTCCATTGGCTATGGATCCAACTGCAAAGAGCACAGAGAGTATCTCAAGAGACCACGTTGTCTTCG
AGGAACATCCTGGTCTGGTCACTATCACTGGTGGAAAATGGACAACTTATCGAAGTATGGCTGAAGATGC
GGTTAATGCAGCAATCAAATCAGGGAAGCTGAGTCCAACCAATGGATGCGTAACACAGAAGCTACAGCTT
CTTGGTTCTCATGGATGGGAACCATCTTCTTTCACAGCTCTTGCGCAGCAATACGTGCGCATGAAGAAAA
CATATGGTGGTAAAGTGGTTCCTGGAGCAATGGACACAGCTGCTGCAAAGCATTTGTCTCATGCATACGG
TTCGATGGCTGAACGAGTCGCCACCATAGCTCAGGAGGAGGGTTTGGGGAAACGGTTGGCGCATGGACAT
CCGTTTCTTGAAGCAGAGGTTGCGTACTGCGCAAGGCACGAGTACTGCGAGTCAGCGGTTGATTTTATAG
CGAGGAGATGTAGAATCGCGTTCTTGGACACAGACGCGGCGGCGAGGGCGTTGCAGCGTGTGGTGGAGAT
TCTAGCGAGTGAACACAAGTGGGACAAGTCGAGGGAGAAGCAGGAGTTGCAGAAGGCTAAAGAGTTTCTT
CAGACATTCAAGTCTTCCAAAAACGCACAGTTTCACGATGGCAAACACAACTGAAGCTGTCTGCATCTGA
GAAAAAAATTAAAAACTACTCTAATTGAATTTATTATTTTCTTCTATTTCCCAATTGTTGGTGGCTCTTG
GGTACTAGCCACTAGAGATGAGGAATAAATGGTATACGGATGGAATAATACTGCCACTACTCAAATGTTT
ATTGGATTAAACAGAACTTTGATGTGATGTGATGCGATGGAGGACAGAAACAGTCTCTGGTCGGTCGCAG
ATAAAACAGAGTAAATTGTGAATTTCAC